RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 INTS3Q68E01 1043 aaKnown RBP20.26■□□□□ 0.83
SIN3B-206ENST00000595541 CEP85Q6P2H3 762 aa20.26■□□□□ 0.83
SIN3B-206ENST00000595541 FOXD4L4Q8WXT5 416 aaPredicted RBP20.26■□□□□ 0.83
SIN3B-206ENST00000595541 ANP32BQ92688 251 aaKnown RBP20.26■□□□□ 0.83
SIN3B-206ENST00000595541 PDLIM2Q96JY6 352 aa20.26■□□□□ 0.83
SIN3B-206ENST00000595541 MSNP26038 577 aaKnown RBP20.26■□□□□ 0.83
SIN3B-206ENST00000595541 REREQ9P2R6 1566 aa20.26■□□□□ 0.83
SIN3B-206ENST00000595541 RGS12O14924 1447 aa20.25■□□□□ 0.83
SIN3B-206ENST00000595541 TMEM63CQ9P1W3 806 aa20.25■□□□□ 0.83
SIN3B-206ENST00000595541 RIMS2Q9UQ26 1411 aa20.25■□□□□ 0.83
SIN3B-206ENST00000595541 TMEM131LA2VDJ0 1609 aa20.25■□□□□ 0.83
SIN3B-206ENST00000595541 NCKAP5LQ9HCH0 1330 aa20.24■□□□□ 0.83
SIN3B-206ENST00000595541 RBM10P98175 930 aaKnown RBP20.24■□□□□ 0.83
SIN3B-206ENST00000595541 XPCQ01831 940 aaPredicted RBP20.24■□□□□ 0.83
SIN3B-206ENST00000595541 MEIS3Q99687 375 aa20.24■□□□□ 0.83
SIN3B-206ENST00000595541 NOL7Q9UMY1 257 aaKnown RBP20.23■□□□□ 0.83
SIN3B-206ENST00000595541 R3HCC1Q9Y3T6 440 aaKnown RBP20.23■□□□□ 0.83
SIN3B-206ENST00000595541 ALKQ9UM73 1620 aa20.22■□□□□ 0.83
SIN3B-206ENST00000595541 AEBP1Q8IUX7 1158 aa20.22■□□□□ 0.83
SIN3B-206ENST00000595541 SYCE3A1L190 88 aa20.21■□□□□ 0.83
SIN3B-206ENST00000595541 CWC22Q9HCG8 908 aaKnown RBP20.21■□□□□ 0.83
SIN3B-206ENST00000595541 MSH6P52701 1360 aa20.21■□□□□ 0.83
SIN3B-206ENST00000595541 RTL1A6NKG5 1358 aa20.21■□□□□ 0.83
SIN3B-206ENST00000595541 PDCL3Q9H2J4 239 aa20.21■□□□□ 0.83
SIN3B-206ENST00000595541 KIF24Q5T7B8 1368 aa20.2■□□□□ 0.82
SIN3B-206ENST00000595541 ST18O60284 1047 aa20.19■□□□□ 0.82
SIN3B-206ENST00000595541 TSHZ3Q63HK5 1081 aa20.19■□□□□ 0.82
SIN3B-206ENST00000595541 RPAP2Q8IXW5 612 aaPredicted RBP20.19■□□□□ 0.82
SIN3B-206ENST00000595541 DIP2CQ9Y2E4 1556 aa20.19■□□□□ 0.82
SIN3B-206ENST00000595541 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.18■□□□□ 0.82
SIN3B-206ENST00000595541 PODXL2Q9NZ53 605 aa20.18■□□□□ 0.82
SIN3B-206ENST00000595541 ZNF500O60304 480 aaPredicted RBP20.18■□□□□ 0.82
SIN3B-206ENST00000595541 MCM10Q7L590 875 aa20.18■□□□□ 0.82
SIN3B-206ENST00000595541 HS1BP3Q53T59 392 aa20.17■□□□□ 0.82
SIN3B-206ENST00000595541 RNF214Q8ND24 703 aa20.17■□□□□ 0.82
SIN3B-206ENST00000595541 LRSAM1Q6UWE0 723 aa20.17■□□□□ 0.82
SIN3B-206ENST00000595541 NPM1P06748 294 aaKnown RBP eCLIP20.17■□□□□ 0.82
SIN3B-206ENST00000595541 ATP7BP35670 1465 aa20.16■□□□□ 0.82
SIN3B-206ENST00000595541 CDK12Q9NYV4 1490 aaPredicted RBP20.16■□□□□ 0.82
SIN3B-206ENST00000595541 NEK4P51957 841 aa20.16■□□□□ 0.82
SIN3B-206ENST00000595541 LMOD3Q0VAK6 560 aa20.16■□□□□ 0.82
SIN3B-206ENST00000595541 TMX3Q96JJ7 454 aa20.16■□□□□ 0.82
SIN3B-206ENST00000595541 ERC2O15083 957 aa20.16■□□□□ 0.82
SIN3B-206ENST00000595541 CPSF1Q10570 1443 aaKnown RBP20.16■□□□□ 0.82
SIN3B-206ENST00000595541 PALD1Q9ULE6 856 aa20.15■□□□□ 0.82
SIN3B-206ENST00000595541 PREX1Q8TCU6 1659 aa20.15■□□□□ 0.82
SIN3B-206ENST00000595541 CPS1P31327 1500 aa20.15■□□□□ 0.82
SIN3B-206ENST00000595541 MIS18AQ9NYP9 233 aa20.15■□□□□ 0.82
SIN3B-206ENST00000595541 ZKSCAN5Q9Y2L8 839 aa20.15■□□□□ 0.82
SIN3B-206ENST00000595541 CHL1O00533 1208 aa20.14■□□□□ 0.82
SIN3B-206ENST00000595541 REC8O95072 547 aa20.14■□□□□ 0.82
SIN3B-206ENST00000595541 PDE1AP54750 535 aa20.14■□□□□ 0.81
SIN3B-206ENST00000595541 G2E3Q7L622 706 aa20.14■□□□□ 0.81
SIN3B-206ENST00000595541 FAM13BQ9NYF5 915 aa20.14■□□□□ 0.81
SIN3B-206ENST00000595541 F6X3S4 739 aa20.13■□□□□ 0.81
SIN3B-206ENST00000595541 CASC1Q6TDU7 716 aa20.13■□□□□ 0.81
SIN3B-206ENST00000595541 NOL8Q76FK4 1167 aaKnown RBP20.13■□□□□ 0.81
SIN3B-206ENST00000595541 SULT6B1Q6IMI4 303 aa20.13■□□□□ 0.81
SIN3B-206ENST00000595541 EDC4Q6P2E9 1401 aaKnown RBP20.12■□□□□ 0.81
SIN3B-206ENST00000595541 TERF1P54274 439 aa20.12■□□□□ 0.81
SIN3B-206ENST00000595541 FOXD4L6Q3SYB3 417 aaPredicted RBP20.12■□□□□ 0.81
SIN3B-206ENST00000595541 FOXD4L3Q6VB84 417 aaPredicted RBP20.12■□□□□ 0.81
SIN3B-206ENST00000595541 AATKQ6ZMQ8 1374 aa20.12■□□□□ 0.81
SIN3B-206ENST00000595541 SLC4A2P04920 1241 aa20.12■□□□□ 0.81
SIN3B-206ENST00000595541 COG3Q96JB2 828 aa20.11■□□□□ 0.81
SIN3B-206ENST00000595541 EXOC6BQ9Y2D4 811 aa20.11■□□□□ 0.81
SIN3B-206ENST00000595541 BRD1O95696 1058 aa20.11■□□□□ 0.81
SIN3B-206ENST00000595541 STAG3Q9UJ98 1225 aa20.11■□□□□ 0.81
SIN3B-206ENST00000595541 UQCRHLA0A096LP55 91 aa20.1■□□□□ 0.81
SIN3B-206ENST00000595541 WASLO00401 505 aaPredicted RBP20.1■□□□□ 0.81
SIN3B-206ENST00000595541 UQCRHP07919 91 aa20.1■□□□□ 0.81
SIN3B-206ENST00000595541 EIF4A2Q14240 407 aaKnown RBP20.1■□□□□ 0.81
SIN3B-206ENST00000595541 SLC4A10Q6U841 1118 aa20.1■□□□□ 0.81
SIN3B-206ENST00000595541 GDPD2Q9HCC8 539 aa20.1■□□□□ 0.81
SIN3B-206ENST00000595541 OSBPL3Q9H4L5 887 aa20.09■□□□□ 0.81
SIN3B-206ENST00000595541 MPNDQ8N594 471 aa20.09■□□□□ 0.81
SIN3B-206ENST00000595541 GADD45BO75293 160 aaPredicted RBP20.08■□□□□ 0.8
SIN3B-206ENST00000595541 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.08■□□□□ 0.8
SIN3B-206ENST00000595541 NUDT16Q96DE0 195 aaKnown RBP20.08■□□□□ 0.8
SIN3B-206ENST00000595541 ESYT1Q9BSJ8 1104 aa20.07■□□□□ 0.8
SIN3B-206ENST00000595541 SALL3Q9BXA9 1300 aa20.07■□□□□ 0.8
SIN3B-206ENST00000595541 CUL4AQ13619 759 aa20.07■□□□□ 0.8
SIN3B-206ENST00000595541 TXNDC2Q86VQ3 553 aa20.07■□□□□ 0.8
SIN3B-206ENST00000595541 PTPRCP08575 1304 aa20.07■□□□□ 0.8
SIN3B-206ENST00000595541 ZBTB7CA1YPR0 619 aa20.06■□□□□ 0.8
SIN3B-206ENST00000595541 IL25Q9H293 177 aa20.06■□□□□ 0.8
SIN3B-206ENST00000595541 FOXO3O43524 673 aa20.06■□□□□ 0.8
SIN3B-206ENST00000595541 UPF3BQ9BZI7 483 aaKnown RBP20.06■□□□□ 0.8
SIN3B-206ENST00000595541 UNC5CLQ8IV45 518 aa20.05■□□□□ 0.8
SIN3B-206ENST00000595541 JARID2Q92833 1246 aaPredicted RBP20.05■□□□□ 0.8
SIN3B-206ENST00000595541 ARID3AQ99856 593 aa20.05■□□□□ 0.8
SIN3B-206ENST00000595541 KIAA0232Q92628 1395 aa20.05■□□□□ 0.8
SIN3B-206ENST00000595541 MBD3O95983 291 aa20.04■□□□□ 0.8
SIN3B-206ENST00000595541 HSP90AB2PQ58FF8 381 aa20.04■□□□□ 0.8
SIN3B-206ENST00000595541 CCDC39Q9UFE4 941 aa20.04■□□□□ 0.8
SIN3B-206ENST00000595541 RIMBP3CA6NJZ7 1639 aa20.04■□□□□ 0.8
SIN3B-206ENST00000595541 RIMBP3BA6NNM3 1639 aa20.04■□□□□ 0.8
SIN3B-206ENST00000595541 RIMBP3Q9UFD9 1639 aa20.04■□□□□ 0.8
SIN3B-206ENST00000595541 DLC1Q96QB1 1528 aa20.03■□□□□ 0.8
SIN3B-206ENST00000595541 PNMA6EA0A0J9YXQ4 647 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms