RNA–Protein interactions for RNA: ENST00000594656.1

PPFIA4-207, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-207ENST00000594656 CARD11Q9BXL7 1154 aa18.26■□□□□ 0.51
PPFIA4-207ENST00000594656 GOLGB1Q14789 3259 aaKnown RBP18.26■□□□□ 0.51
PPFIA4-207ENST00000594656 A0A1W2PP64 1363 aa18.26■□□□□ 0.51
PPFIA4-207ENST00000594656 COL24A1Q17RW2 1714 aa18.26■□□□□ 0.51
PPFIA4-207ENST00000594656 HOXC9P31274 260 aa18.25■□□□□ 0.51
PPFIA4-207ENST00000594656 MAP3K19Q56UN5 1328 aa18.24■□□□□ 0.51
PPFIA4-207ENST00000594656 GRIN3BO60391 1043 aa18.24■□□□□ 0.51
PPFIA4-207ENST00000594656 IFFO2Q5TF58 517 aa18.24■□□□□ 0.51
PPFIA4-207ENST00000594656 CCNL1Q9UK58 526 aaPredicted RBP18.24■□□□□ 0.51
PPFIA4-207ENST00000594656 LTN1O94822 1766 aa18.23■□□□□ 0.51
PPFIA4-207ENST00000594656 QSER1Q2KHR3 1735 aa18.21■□□□□ 0.51
PPFIA4-207ENST00000594656 MSH5O43196 834 aa18.21■□□□□ 0.51
PPFIA4-207ENST00000594656 NBPF6Q5VWK0 638 aa18.21■□□□□ 0.51
PPFIA4-207ENST00000594656 NBPF4Q96M43 638 aa18.21■□□□□ 0.51
PPFIA4-207ENST00000594656 CEP350Q5VT06 3117 aa18.2■□□□□ 0.5
PPFIA4-207ENST00000594656 AMPHP49418 695 aa18.2■□□□□ 0.5
PPFIA4-207ENST00000594656 COG3Q96JB2 828 aa18.2■□□□□ 0.5
PPFIA4-207ENST00000594656 MSL1Q68DK7 614 aa18.19■□□□□ 0.5
PPFIA4-207ENST00000594656 SHANK3Q9BYB0 1731 aa18.19■□□□□ 0.5
PPFIA4-207ENST00000594656 TESK2Q96S53 571 aa18.18■□□□□ 0.5
PPFIA4-207ENST00000594656 MEGF6O75095 1541 aa18.18■□□□□ 0.5
PPFIA4-207ENST00000594656 CD2APQ9Y5K6 639 aa18.17■□□□□ 0.5
PPFIA4-207ENST00000594656 USP47Q96K76 1375 aa18.17■□□□□ 0.5
PPFIA4-207ENST00000594656 TUBGCP6Q96RT7 1819 aa18.16■□□□□ 0.5
PPFIA4-207ENST00000594656 LY75O60449 1722 aa18.16■□□□□ 0.5
PPFIA4-207ENST00000594656 USHBP1Q8N6Y0 703 aa18.16■□□□□ 0.5
PPFIA4-207ENST00000594656 RRS1Q15050 365 aaKnown RBP18.15■□□□□ 0.5
PPFIA4-207ENST00000594656 FAM208AQ9UK61 1670 aaKnown RBP18.15■□□□□ 0.5
PPFIA4-207ENST00000594656 ATP10DQ9P241 1426 aa18.15■□□□□ 0.5
PPFIA4-207ENST00000594656 FYB1O15117 783 aa18.14■□□□□ 0.49
PPFIA4-207ENST00000594656 CGNL1Q0VF96 1302 aa18.14■□□□□ 0.49
PPFIA4-207ENST00000594656 ST20-MTHFSA0A0A6YYL1 179 aa18.13■□□□□ 0.49
PPFIA4-207ENST00000594656 AMIGO3Q86WK7 504 aa18.13■□□□□ 0.49
PPFIA4-207ENST00000594656 FLAD1Q8NFF5 587 aa18.13■□□□□ 0.49
PPFIA4-207ENST00000594656 RAPGEF4Q8WZA2 1011 aa18.12■□□□□ 0.49
PPFIA4-207ENST00000594656 DOT1LQ8TEK3 1739 aa18.12■□□□□ 0.49
PPFIA4-207ENST00000594656 TATP17735 454 aaPredicted RBP18.11■□□□□ 0.49
PPFIA4-207ENST00000594656 HSP90AB2PQ58FF8 381 aa18.11■□□□□ 0.49
PPFIA4-207ENST00000594656 SMIM5Q71RC9 77 aa18.11■□□□□ 0.49
PPFIA4-207ENST00000594656 CYP27B1O15528 508 aa18.1■□□□□ 0.49
PPFIA4-207ENST00000594656 MPRIPQ6WCQ1 1025 aa18.1■□□□□ 0.49
PPFIA4-207ENST00000594656 GGNBP2Q9H3C7 697 aa18.1■□□□□ 0.49
PPFIA4-207ENST00000594656 GPBP1L1Q9HC44 474 aaPredicted RBP18.1■□□□□ 0.49
PPFIA4-207ENST00000594656 RTL1A6NKG5 1358 aa18.09■□□□□ 0.49
PPFIA4-207ENST00000594656 ADCY9O60503 1353 aa18.09■□□□□ 0.49
PPFIA4-207ENST00000594656 RGPD2P0DJD1 1756 aa18.09■□□□□ 0.49
PPFIA4-207ENST00000594656 PALLDQ8WX93 1383 aa18.08■□□□□ 0.49
PPFIA4-207ENST00000594656 HSPA6P17066 643 aa18.08■□□□□ 0.48
PPFIA4-207ENST00000594656 HMGB2P26583 209 aaKnown RBP18.08■□□□□ 0.48
PPFIA4-207ENST00000594656 PIGBQ92521 554 aa18.07■□□□□ 0.48
PPFIA4-207ENST00000594656 PCDH11XQ9BZA7 1347 aa18.06■□□□□ 0.48
PPFIA4-207ENST00000594656 PCDH11YQ9BZA8 1340 aa18.06■□□□□ 0.48
PPFIA4-207ENST00000594656 ZNF526Q8TF50 670 aaPredicted RBP18.06■□□□□ 0.48
PPFIA4-207ENST00000594656 INSRP06213 1382 aa18.05■□□□□ 0.48
PPFIA4-207ENST00000594656 SLC24A1O60721 1099 aa18.05■□□□□ 0.48
PPFIA4-207ENST00000594656 NKX1-1Q15270 411 aaPredicted RBP18.05■□□□□ 0.48
PPFIA4-207ENST00000594656 SMARCC1Q92922 1105 aaPredicted RBP18.05■□□□□ 0.48
PPFIA4-207ENST00000594656 WWC3Q9ULE0 1092 aa18.05■□□□□ 0.48
PPFIA4-207ENST00000594656 IGSF1Q8N6C5 1336 aa18.04■□□□□ 0.48
PPFIA4-207ENST00000594656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.04■□□□□ 0.48
PPFIA4-207ENST00000594656 AK7Q96M32 723 aa18.04■□□□□ 0.48
PPFIA4-207ENST00000594656 KIF3CO14782 793 aa18.03■□□□□ 0.48
PPFIA4-207ENST00000594656 PHF14O94880 888 aa18.03■□□□□ 0.48
PPFIA4-207ENST00000594656 LINC00116Q8NCU8 138 aa18.02■□□□□ 0.48
PPFIA4-207ENST00000594656 TONSLQ96HA7 1378 aa18.02■□□□□ 0.47
PPFIA4-207ENST00000594656 C5P01031 1676 aa18■□□□□ 0.47
PPFIA4-207ENST00000594656 SMG6Q86US8 1419 aaKnown RBP18■□□□□ 0.47
PPFIA4-207ENST00000594656 LOC102724428A0A0B4J2F2 783 aa18■□□□□ 0.47
PPFIA4-207ENST00000594656 SSFA2P28290 1259 aa18■□□□□ 0.47
PPFIA4-207ENST00000594656 SIK1P57059 783 aa18■□□□□ 0.47
PPFIA4-207ENST00000594656 FLT4P35916 1363 aa18■□□□□ 0.47
PPFIA4-207ENST00000594656 ITPK1Q13572 414 aa17.99■□□□□ 0.47
PPFIA4-207ENST00000594656 CARD14Q9BXL6 1004 aa17.99■□□□□ 0.47
PPFIA4-207ENST00000594656 EMILIN1Q9Y6C2 1016 aa17.99■□□□□ 0.47
PPFIA4-207ENST00000594656 KIF24Q5T7B8 1368 aa17.99■□□□□ 0.47
PPFIA4-207ENST00000594656 ASAP1Q9ULH1 1129 aa17.98■□□□□ 0.47
PPFIA4-207ENST00000594656 TAF1LQ8IZX4 1826 aa17.98■□□□□ 0.47
PPFIA4-207ENST00000594656 C4BP0C0L5 1744 aa17.98■□□□□ 0.47
PPFIA4-207ENST00000594656 TMF1P82094 1093 aa17.97■□□□□ 0.47
PPFIA4-207ENST00000594656 TOGARAM1Q9Y4F4 1720 aa17.96■□□□□ 0.47
PPFIA4-207ENST00000594656 SPG7Q9UQ90 795 aa17.96■□□□□ 0.47
PPFIA4-207ENST00000594656 DNAJC5GQ8N7S2 189 aa17.95■□□□□ 0.46
PPFIA4-207ENST00000594656 EYA1Q99502 592 aa17.95■□□□□ 0.46
PPFIA4-207ENST00000594656 ATG3Q9NT62 314 aa17.95■□□□□ 0.46
PPFIA4-207ENST00000594656 NCAPD2Q15021 1401 aa17.95■□□□□ 0.46
PPFIA4-207ENST00000594656 GNPATO15228 680 aa17.94■□□□□ 0.46
PPFIA4-207ENST00000594656 MMP10P09238 476 aa17.94■□□□□ 0.46
PPFIA4-207ENST00000594656 ATP6V1AP38606 617 aa17.94■□□□□ 0.46
PPFIA4-207ENST00000594656 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.94■□□□□ 0.468e-6■■■□□ 14.7
PPFIA4-207ENST00000594656 NSD3Q9BZ95 1437 aa17.93■□□□□ 0.46
PPFIA4-207ENST00000594656 TMOD3Q9NYL9 352 aa17.93■□□□□ 0.46
PPFIA4-207ENST00000594656 WASHC2AQ641Q2 1341 aa17.93■□□□□ 0.46
PPFIA4-207ENST00000594656 UBR3Q6ZT12 1888 aa17.92■□□□□ 0.46
PPFIA4-207ENST00000594656 A0A0G2JLW4 131 aa17.92■□□□□ 0.46
PPFIA4-207ENST00000594656 PHKG2P15735 406 aa17.92■□□□□ 0.46
PPFIA4-207ENST00000594656 TGFB2P61812 414 aa17.92■□□□□ 0.46
PPFIA4-207ENST00000594656 SLC4A9Q96Q91 983 aa17.92■□□□□ 0.46
PPFIA4-207ENST00000594656 MAP2P11137 1827 aaKnown RBP17.92■□□□□ 0.46
PPFIA4-207ENST00000594656 ITGB4P16144 1822 aa17.91■□□□□ 0.46
PPFIA4-207ENST00000594656 PPM1GO15355 546 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms