RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 FAM208AQ9UK61 1670 aaKnown RBP27.78■■■□□ 2.04
PRKCSH-216ENST00000592445 CCNL1Q9UK58 526 aaPredicted RBP27.77■■■□□ 2.04
PRKCSH-216ENST00000592445 AMPHP49418 695 aa27.76■■■□□ 2.03
PRKCSH-216ENST00000592445 ZCRB1Q8TBF4 217 aaKnown RBP27.76■■■□□ 2.03
PRKCSH-216ENST00000592445 COG3Q96JB2 828 aa27.76■■■□□ 2.03
PRKCSH-216ENST00000592445 COL24A1Q17RW2 1714 aa27.75■■■□□ 2.03
PRKCSH-216ENST00000592445 HOXC9P31274 260 aa27.74■■■□□ 2.03
PRKCSH-216ENST00000592445 TUBGCP6Q96RT7 1819 aa27.74■■■□□ 2.03
PRKCSH-216ENST00000592445 NSD2O96028 1365 aa27.73■■■□□ 2.03
PRKCSH-216ENST00000592445 MAP3K19Q56UN5 1328 aa27.73■■■□□ 2.03
PRKCSH-216ENST00000592445 DOT1LQ8TEK3 1739 aa27.73■■■□□ 2.03
PRKCSH-216ENST00000592445 GRIN3BO60391 1043 aa27.73■■■□□ 2.03
PRKCSH-216ENST00000592445 PUS7Q96PZ0 661 aaKnown RBP27.73■■■□□ 2.03
PRKCSH-216ENST00000592445 USP47Q96K76 1375 aa27.71■■■□□ 2.03
PRKCSH-216ENST00000592445 LY75O60449 1722 aa27.7■■■□□ 2.03
PRKCSH-216ENST00000592445 FBLN1P23142 703 aa27.7■■■□□ 2.02
PRKCSH-216ENST00000592445 YBX3P16989 372 aaKnown RBP eCLIP27.69■■■□□ 2.02
PRKCSH-216ENST00000592445 COL23A1Q86Y22 540 aaPredicted RBP27.69■■■□□ 2.02
PRKCSH-216ENST00000592445 MEGF6O75095 1541 aa27.68■■■□□ 2.02
PRKCSH-216ENST00000592445 MSL1Q68DK7 614 aa27.67■■■□□ 2.02
PRKCSH-216ENST00000592445 SHANK3Q9BYB0 1731 aa27.67■■■□□ 2.02
PRKCSH-216ENST00000592445 CEP350Q5VT06 3117 aa27.65■■■□□ 2.02
PRKCSH-216ENST00000592445 RAPGEF4Q8WZA2 1011 aa27.64■■■□□ 2.02
PRKCSH-216ENST00000592445 RGPD2P0DJD1 1756 aa27.63■■■□□ 2.01
PRKCSH-216ENST00000592445 NBPF6Q5VWK0 638 aa27.63■■■□□ 2.01
PRKCSH-216ENST00000592445 USHBP1Q8N6Y0 703 aa27.63■■■□□ 2.01
PRKCSH-216ENST00000592445 NBPF4Q96M43 638 aa27.63■■■□□ 2.01
PRKCSH-216ENST00000592445 CGNL1Q0VF96 1302 aa27.63■■■□□ 2.01
PRKCSH-216ENST00000592445 RRS1Q15050 365 aaKnown RBP27.62■■■□□ 2.01
PRKCSH-216ENST00000592445 RTL1A6NKG5 1358 aa27.61■■■□□ 2.01
PRKCSH-216ENST00000592445 TONSLQ96HA7 1378 aa27.61■■■□□ 2.01
PRKCSH-216ENST00000592445 HMGB2P26583 209 aaKnown RBP27.6■■■□□ 2.01
PRKCSH-216ENST00000592445 SMG6Q86US8 1419 aaKnown RBP27.59■■■□□ 2.01
PRKCSH-216ENST00000592445 ST20-MTHFSA0A0A6YYL1 179 aa27.59■■■□□ 2.01
PRKCSH-216ENST00000592445 TATP17735 454 aaPredicted RBP27.59■■■□□ 2.01
PRKCSH-216ENST00000592445 TESK2Q96S53 571 aa27.59■■■□□ 2.01
PRKCSH-216ENST00000592445 CD2APQ9Y5K6 639 aa27.59■■■□□ 2.01
PRKCSH-216ENST00000592445 IFFO2Q5TF58 517 aa27.58■■■□□ 2.01
PRKCSH-216ENST00000592445 FLAD1Q8NFF5 587 aa27.58■■■□□ 2.01
PRKCSH-216ENST00000592445 ATP10DQ9P241 1426 aa27.58■■■□□ 2
PRKCSH-216ENST00000592445 SLC24A1O60721 1099 aa27.57■■■□□ 2
PRKCSH-216ENST00000592445 MPRIPQ6WCQ1 1025 aa27.56■■■□□ 2
PRKCSH-216ENST00000592445 PCDH11XQ9BZA7 1347 aa27.56■■■□□ 2
PRKCSH-216ENST00000592445 PCDH11YQ9BZA8 1340 aa27.56■■■□□ 2
PRKCSH-216ENST00000592445 GGNBP2Q9H3C7 697 aa27.55■■■□□ 2
PRKCSH-216ENST00000592445 GPBP1L1Q9HC44 474 aaPredicted RBP27.55■■■□□ 2
PRKCSH-216ENST00000592445 PALLDQ8WX93 1383 aa27.55■■■□□ 2
PRKCSH-216ENST00000592445 C5P01031 1676 aa27.54■■■□□ 2
PRKCSH-216ENST00000592445 FYB1O15117 783 aa27.53■■■□□ 2
PRKCSH-216ENST00000592445 AK7Q96M32 723 aa27.52■■■□□ 2
PRKCSH-216ENST00000592445 HSP90AB2PQ58FF8 381 aa27.51■■□□□ 1.99
PRKCSH-216ENST00000592445 ZNF526Q8TF50 670 aaPredicted RBP27.5■■□□□ 1.99
PRKCSH-216ENST00000592445 SMARCC1Q92922 1105 aaPredicted RBP27.49■■□□□ 1.99
PRKCSH-216ENST00000592445 INSRP06213 1382 aa27.48■■□□□ 1.99
PRKCSH-216ENST00000592445 PHF14O94880 888 aa27.47■■□□□ 1.99
PRKCSH-216ENST00000592445 CYP27B1O15528 508 aa27.46■■□□□ 1.99
PRKCSH-216ENST00000592445 FLT4P35916 1363 aa27.46■■□□□ 1.99
PRKCSH-216ENST00000592445 TMF1P82094 1093 aa27.45■■□□□ 1.98
PRKCSH-216ENST00000592445 WWC3Q9ULE0 1092 aa27.45■■□□□ 1.98
PRKCSH-216ENST00000592445 TAF1LQ8IZX4 1826 aa27.45■■□□□ 1.98
PRKCSH-216ENST00000592445 C4BP0C0L5 1744 aa27.44■■□□□ 1.98
PRKCSH-216ENST00000592445 IGSF1Q8N6C5 1336 aa27.44■■□□□ 1.98
PRKCSH-216ENST00000592445 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.43■■□□□ 1.98
PRKCSH-216ENST00000592445 AMIGO3Q86WK7 504 aa27.43■■□□□ 1.98
PRKCSH-216ENST00000592445 ADCY9O60503 1353 aa27.43■■□□□ 1.98
PRKCSH-216ENST00000592445 HSPA6P17066 643 aa27.42■■□□□ 1.98
PRKCSH-216ENST00000592445 SMIM5Q71RC9 77 aa27.42■■□□□ 1.98
PRKCSH-216ENST00000592445 NSD3Q9BZ95 1437 aa27.41■■□□□ 1.98
PRKCSH-216ENST00000592445 KIF24Q5T7B8 1368 aa27.41■■□□□ 1.98
PRKCSH-216ENST00000592445 PIGBQ92521 554 aa27.41■■□□□ 1.98
PRKCSH-216ENST00000592445 SSFA2P28290 1259 aa27.38■■□□□ 1.97
PRKCSH-216ENST00000592445 SPG7Q9UQ90 795 aa27.38■■□□□ 1.97
PRKCSH-216ENST00000592445 TOGARAM1Q9Y4F4 1720 aa27.38■■□□□ 1.97
PRKCSH-216ENST00000592445 ITGB4P16144 1822 aa27.37■■□□□ 1.97
PRKCSH-216ENST00000592445 LOC102724428A0A0B4J2F2 783 aa27.36■■□□□ 1.97
PRKCSH-216ENST00000592445 PPM1GO15355 546 aaPredicted RBP27.36■■□□□ 1.97
PRKCSH-216ENST00000592445 SIK1P57059 783 aa27.36■■□□□ 1.97
PRKCSH-216ENST00000592445 LINC00116Q8NCU8 138 aa27.36■■□□□ 1.97
PRKCSH-216ENST00000592445 EMILIN1Q9Y6C2 1016 aa27.36■■□□□ 1.97
PRKCSH-216ENST00000592445 KIF20BQ96Q89 1820 aa27.35■■□□□ 1.97
PRKCSH-216ENST00000592445 NKX1-1Q15270 411 aaPredicted RBP27.35■■□□□ 1.97
PRKCSH-216ENST00000592445 UBR3Q6ZT12 1888 aa27.35■■□□□ 1.97
PRKCSH-216ENST00000592445 CDCA8Q53HL2 280 aa27.34■■□□□ 1.97
PRKCSH-216ENST00000592445 TMOD3Q9NYL9 352 aa27.34■■□□□ 1.97
PRKCSH-216ENST00000592445 GNPATO15228 680 aa27.33■■□□□ 1.97
PRKCSH-216ENST00000592445 PKD1L3Q7Z443 1732 aa27.33■■□□□ 1.96
PRKCSH-216ENST00000592445 ATP6V1AP38606 617 aa27.31■■□□□ 1.96
PRKCSH-216ENST00000592445 ASAP1Q9ULH1 1129 aa27.3■■□□□ 1.96
PRKCSH-216ENST00000592445 ITPK1Q13572 414 aa27.29■■□□□ 1.96
PRKCSH-216ENST00000592445 MMP10P09238 476 aa27.28■■□□□ 1.96
PRKCSH-216ENST00000592445 CARD14Q9BXL6 1004 aa27.28■■□□□ 1.96
PRKCSH-216ENST00000592445 NCAPD2Q15021 1401 aa27.27■■□□□ 1.96
PRKCSH-216ENST00000592445 KIF3CO14782 793 aa27.27■■□□□ 1.96
PRKCSH-216ENST00000592445 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.27■■□□□ 1.96
PRKCSH-216ENST00000592445 MAP2P11137 1827 aaKnown RBP27.27■■□□□ 1.96
PRKCSH-216ENST00000592445 IFNL2Q8IZJ0 200 aa27.26■■□□□ 1.95
PRKCSH-216ENST00000592445 WASHC2AQ641Q2 1341 aa27.25■■□□□ 1.95
PRKCSH-216ENST00000592445 EYA1Q99502 592 aa27.25■■□□□ 1.95
PRKCSH-216ENST00000592445 PHKG2P15735 406 aa27.24■■□□□ 1.95
PRKCSH-216ENST00000592445 ATG3Q9NT62 314 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms