RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 MS4A1P11836 297 aa11.8□□□□□ -0.52
VMP1-213ENST00000591877 PCMTD1Q96MG8 357 aaPredicted RBP11.8□□□□□ -0.52
VMP1-213ENST00000591877 MROH2AA6NES4 1674 aa11.8□□□□□ -0.52
VMP1-213ENST00000591877 WNT7AO00755 349 aa11.79□□□□□ -0.52
VMP1-213ENST00000591877 NLRP7Q8WX94 980 aa11.79□□□□□ -0.52
VMP1-213ENST00000591877 TRIM47Q96LD4 638 aa11.79□□□□□ -0.52
VMP1-213ENST00000591877 GPCPD1Q9NPB8 672 aa11.79□□□□□ -0.52
VMP1-213ENST00000591877 RTEL1-TNFRSF6BF6WH68 1400 aa11.78□□□□□ -0.52
VMP1-213ENST00000591877 CLTCQ00610 1675 aaKnown RBP11.78□□□□□ -0.52
VMP1-213ENST00000591877 CCDC141Q6ZP82 1450 aa11.78□□□□□ -0.52
VMP1-213ENST00000591877 SH3D19Q5HYK7 790 aa11.78□□□□□ -0.52
VMP1-213ENST00000591877 BRICD5Q6PL45 260 aa11.78□□□□□ -0.52
VMP1-213ENST00000591877 MRGPRX2Q96LB1 330 aa11.78□□□□□ -0.52
VMP1-213ENST00000591877 ARHGEF5Q12774 1597 aa11.78□□□□□ -0.52
VMP1-213ENST00000591877 STRCQ7RTU9 1775 aa11.77□□□□□ -0.52
VMP1-213ENST00000591877 SENP2Q9HC62 589 aa11.77□□□□□ -0.53
VMP1-213ENST00000591877 CNTLNQ9NXG0 1405 aa11.77□□□□□ -0.53
VMP1-213ENST00000591877 RNF19BQ6ZMZ0 732 aa11.76□□□□□ -0.53
VMP1-213ENST00000591877 HPS1Q92902 700 aa11.76□□□□□ -0.53
VMP1-213ENST00000591877 REPIN1Q9BWE0 567 aaKnown RBP11.76□□□□□ -0.53
VMP1-213ENST00000591877 TRIM32Q13049 653 aa11.75□□□□□ -0.53
VMP1-213ENST00000591877 ESF1Q9H501 851 aaKnown RBP11.75□□□□□ -0.53
VMP1-213ENST00000591877 ZMYM3Q14202 1370 aa11.75□□□□□ -0.53
VMP1-213ENST00000591877 DHX29Q7Z478 1369 aaKnown RBP11.75□□□□□ -0.53
VMP1-213ENST00000591877 UHRF1BP1Q6BDS2 1440 aa11.75□□□□□ -0.53
VMP1-213ENST00000591877 GCGRP47871 477 aa11.74□□□□□ -0.53
VMP1-213ENST00000591877 GGT6Q6P531 493 aa11.74□□□□□ -0.53
VMP1-213ENST00000591877 SALL2Q9Y467 1007 aaPredicted RBP11.74□□□□□ -0.53
VMP1-213ENST00000591877 MYOM3Q5VTT5 1437 aa11.74□□□□□ -0.53
VMP1-213ENST00000591877 MSS51Q4VC12 460 aa11.73□□□□□ -0.53
VMP1-213ENST00000591877 MIA2Q96PC5 1412 aa11.73□□□□□ -0.53
VMP1-213ENST00000591877 MAST1Q9Y2H9 1570 aa11.73□□□□□ -0.53
VMP1-213ENST00000591877 NPATQ14207 1427 aa11.71□□□□□ -0.53
VMP1-213ENST00000591877 PTPRKQ15262 1439 aa11.71□□□□□ -0.53
VMP1-213ENST00000591877 A6NJR5 290 aa11.71□□□□□ -0.53
VMP1-213ENST00000591877 MDM2Q00987 491 aaPredicted RBP11.71□□□□□ -0.53
VMP1-213ENST00000591877 SKIV2LQ15477 1246 aaKnown RBP11.7□□□□□ -0.54
VMP1-213ENST00000591877 KIFC2Q96AC6 838 aa11.7□□□□□ -0.54
VMP1-213ENST00000591877 MYO3AQ8NEV4 1616 aa11.7□□□□□ -0.54
VMP1-213ENST00000591877 ZNF142P52746 1687 aaPredicted RBP11.69□□□□□ -0.54
VMP1-213ENST00000591877 PTPN23Q9H3S7 1636 aa11.69□□□□□ -0.54
VMP1-213ENST00000591877 KIF3BO15066 747 aa11.69□□□□□ -0.54
VMP1-213ENST00000591877 TSPY4P0CV99 314 aa11.69□□□□□ -0.54
VMP1-213ENST00000591877 TSPY10P0CW01 314 aa11.69□□□□□ -0.54
VMP1-213ENST00000591877 SSTR3P32745 418 aaPredicted RBP11.69□□□□□ -0.54
VMP1-213ENST00000591877 PHOX2BQ99453 314 aa11.69□□□□□ -0.54
VMP1-213ENST00000591877 CROCC2H7BZ55 1655 aa11.68□□□□□ -0.54
VMP1-213ENST00000591877 FAM217BQ9NTX9 383 aaPredicted RBP11.68□□□□□ -0.54
VMP1-213ENST00000591877 SLC16A10Q8TF71 515 aa11.67□□□□□ -0.54
VMP1-213ENST00000591877 RNF17Q9BXT8 1623 aaKnown RBP11.67□□□□□ -0.54
VMP1-213ENST00000591877 KDM5DQ9BY66 1539 aa11.66□□□□□ -0.54
VMP1-213ENST00000591877 TCOF1Q13428 1488 aaKnown RBP11.66□□□□□ -0.54
VMP1-213ENST00000591877 SULF1Q8IWU6 871 aa11.66□□□□□ -0.54
VMP1-213ENST00000591877 FBXO41Q8TF61 875 aa11.66□□□□□ -0.54
VMP1-213ENST00000591877 CAMSAP1Q5T5Y3 1602 aa11.66□□□□□ -0.54
VMP1-213ENST00000591877 MROH1Q8NDA8 1641 aa11.66□□□□□ -0.54
VMP1-213ENST00000591877 EIF2AK4Q9P2K8 1649 aaKnown RBP11.66□□□□□ -0.54
VMP1-213ENST00000591877 ABCC5O15440 1437 aa11.66□□□□□ -0.54
VMP1-213ENST00000591877 NCOA1Q15788 1441 aa11.66□□□□□ -0.54
VMP1-213ENST00000591877 CEP170BQ9Y4F5 1589 aaPredicted RBP11.66□□□□□ -0.54
VMP1-213ENST00000591877 FAM135AQ9P2D6 1515 aa11.65□□□□□ -0.54
VMP1-213ENST00000591877 DNMT1P26358 1616 aaKnown RBP11.65□□□□□ -0.54
VMP1-213ENST00000591877 FAM181BA6NEQ2 426 aa11.65□□□□□ -0.54
VMP1-213ENST00000591877 GMPRP36959 345 aa11.65□□□□□ -0.54
VMP1-213ENST00000591877 FGD6Q6ZV73 1430 aa11.65□□□□□ -0.54
VMP1-213ENST00000591877 PTPRTO14522 1441 aa11.64□□□□□ -0.55
VMP1-213ENST00000591877 MMP16P51512 607 aa11.64□□□□□ -0.55
VMP1-213ENST00000591877 MCM6Q14566 821 aa11.64□□□□□ -0.55
VMP1-213ENST00000591877 RC3H1Q5TC82 1133 aaKnown RBP11.64□□□□□ -0.55
VMP1-213ENST00000591877 FBXO31Q5XUX0 539 aaPredicted RBP11.64□□□□□ -0.55
VMP1-213ENST00000591877 CCDC24Q8N4L8 307 aa11.64□□□□□ -0.55
VMP1-213ENST00000591877 BEGAINQ9BUH8 593 aa11.64□□□□□ -0.55
VMP1-213ENST00000591877 C1orf115Q9H7X2 142 aa11.64□□□□□ -0.55
VMP1-213ENST00000591877 PZPP20742 1482 aa11.63□□□□□ -0.55
VMP1-213ENST00000591877 SHANK2Q9UPX8 1470 aa11.63□□□□□ -0.55
VMP1-213ENST00000591877 GRIPAP1Q4V328 841 aa11.63□□□□□ -0.55
VMP1-213ENST00000591877 NXF1Q9UBU9 619 aaKnown RBP11.63□□□□□ -0.55
VMP1-213ENST00000591877 DUOX2Q9NRD8 1548 aa11.63□□□□□ -0.55
VMP1-213ENST00000591877 CEP152O94986 1710 aa11.63□□□□□ -0.55
VMP1-213ENST00000591877 WASHC2CQ9Y4E1 1318 aa11.62□□□□□ -0.55
VMP1-213ENST00000591877 ZC3H13Q5T200 1668 aaKnown RBP11.62□□□□□ -0.55
VMP1-213ENST00000591877 DAPK1P53355 1430 aa11.62□□□□□ -0.55
VMP1-213ENST00000591877 LORP23490 312 aaPredicted RBP11.62□□□□□ -0.55
VMP1-213ENST00000591877 SKOR1P84550 965 aa11.62□□□□□ -0.55
VMP1-213ENST00000591877 DIXDC1Q155Q3 683 aa11.62□□□□□ -0.55
VMP1-213ENST00000591877 ZSCAN1Q8NBB4 408 aa11.62□□□□□ -0.55
VMP1-213ENST00000591877 ABCC3O15438 1527 aa11.61□□□□□ -0.55
VMP1-213ENST00000591877 LOC100996750A0A140TA64 210 aa11.61□□□□□ -0.55
VMP1-213ENST00000591877 VEGFBP49765 207 aa11.61□□□□□ -0.55
VMP1-213ENST00000591877 Q3C1V9 767 aa11.61□□□□□ -0.55
VMP1-213ENST00000591877 KRTAP4-6Q9BYQ5 205 aa11.61□□□□□ -0.55
VMP1-213ENST00000591877 A2ML1A8K2U0 1454 aa11.61□□□□□ -0.55
VMP1-213ENST00000591877 CFAP65Q6ZU64 1925 aaKnown RBP11.6□□□□□ -0.55
VMP1-213ENST00000591877 PLA2R1Q13018 1463 aa11.6□□□□□ -0.55
VMP1-213ENST00000591877 APBB1O00213 710 aa11.6□□□□□ -0.55
VMP1-213ENST00000591877 ALDH1A1P00352 501 aa11.6□□□□□ -0.55
VMP1-213ENST00000591877 LTBP4Q8N2S1 1624 aa11.6□□□□□ -0.55
VMP1-213ENST00000591877 TNRQ92752 1358 aa11.59□□□□□ -0.55
VMP1-213ENST00000591877 KIF15Q9NS87 1388 aa11.59□□□□□ -0.55
VMP1-213ENST00000591877 TRAK2O60296 914 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms