RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 CRB1P82279 1406 aa14.78□□□□□ -0.04
SMAD4-205ENST00000588745 CSB-PGBD3P0DP91 1061 aa14.78□□□□□ -0.04
SMAD4-205ENST00000588745 EXOSC9Q06265 439 aaKnown RBP14.78□□□□□ -0.04
SMAD4-205ENST00000588745 MCM10Q7L590 875 aa14.78□□□□□ -0.04
SMAD4-205ENST00000588745 RTF1Q92541 710 aaKnown RBP14.78□□□□□ -0.04
SMAD4-205ENST00000588745 GNAT3A8MTJ3 354 aa14.77□□□□□ -0.04
SMAD4-205ENST00000588745 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.77□□□□□ -0.04
SMAD4-205ENST00000588745 NLRP2Q9NX02 1062 aa14.77□□□□□ -0.04
SMAD4-205ENST00000588745 LAS1LQ9Y4W2 734 aaKnown RBP14.77□□□□□ -0.04
SMAD4-205ENST00000588745 WDR17Q8IZU2 1322 aa14.77□□□□□ -0.05
SMAD4-205ENST00000588745 PKD1L3Q7Z443 1732 aa14.76□□□□□ -0.05
SMAD4-205ENST00000588745 UBAP1LF5GYI3 381 aa14.76□□□□□ -0.05
SMAD4-205ENST00000588745 RARSP54136 660 aaKnown RBP14.76□□□□□ -0.05
SMAD4-205ENST00000588745 AMOTQ4VCS5 1084 aa14.76□□□□□ -0.05
SMAD4-205ENST00000588745 MBIPQ9NS73 344 aa14.76□□□□□ -0.05
SMAD4-205ENST00000588745 MEGF6O75095 1541 aa14.76□□□□□ -0.05
SMAD4-205ENST00000588745 PARP4Q9UKK3 1724 aaKnown RBP14.76□□□□□ -0.05
SMAD4-205ENST00000588745 PIP4K2BP78356 416 aa14.75□□□□□ -0.05
SMAD4-205ENST00000588745 PLEKHO1Q53GL0 409 aaPredicted RBP14.75□□□□□ -0.05
SMAD4-205ENST00000588745 ADAMTS7Q9UKP4 1686 aa14.74□□□□□ -0.05
SMAD4-205ENST00000588745 VIRMAQ69YN4 1812 aaKnown RBP14.74□□□□□ -0.05
SMAD4-205ENST00000588745 PLIN1O60240 522 aa14.74□□□□□ -0.05
SMAD4-205ENST00000588745 BCAR3O75815 825 aa14.74□□□□□ -0.05
SMAD4-205ENST00000588745 OVOS2A0A0G2JMS6 1433 aa14.73□□□□□ -0.05
SMAD4-205ENST00000588745 CHL1O00533 1208 aa14.73□□□□□ -0.05
SMAD4-205ENST00000588745 ZNF530Q6P9A1 599 aaPredicted RBP14.73□□□□□ -0.05
SMAD4-205ENST00000588745 RAPGEF4Q8WZA2 1011 aa14.73□□□□□ -0.05
SMAD4-205ENST00000588745 PLCH1Q4KWH8 1693 aa14.73□□□□□ -0.05
SMAD4-205ENST00000588745 CEMIPQ8WUJ3 1361 aa14.73□□□□□ -0.05
SMAD4-205ENST00000588745 TATP17735 454 aaPredicted RBP14.73□□□□□ -0.05
SMAD4-205ENST00000588745 AKAP4Q5JQC9 854 aa14.73□□□□□ -0.05
SMAD4-205ENST00000588745 PPP4R2Q9NY27 417 aa14.73□□□□□ -0.05
SMAD4-205ENST00000588745 IL17REQ8NFR9 667 aa14.72□□□□□ -0.05
SMAD4-205ENST00000588745 ZNF428Q96B54 188 aa14.72□□□□□ -0.05
SMAD4-205ENST00000588745 C1orf141Q5JVX7 400 aa14.71□□□□□ -0.06
SMAD4-205ENST00000588745 TOM1L2Q6ZVM7 507 aa14.71□□□□□ -0.06
SMAD4-205ENST00000588745 CERKQ8TCT0 537 aa14.71□□□□□ -0.06
SMAD4-205ENST00000588745 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.71□□□□□ -0.069e-8■□□□□ 10.8
SMAD4-205ENST00000588745 KDM3BQ7LBC6 1761 aa14.7□□□□□ -0.06
SMAD4-205ENST00000588745 CANXP27824 592 aaKnown RBP14.7□□□□□ -0.06
SMAD4-205ENST00000588745 ALDH1L2Q3SY69 923 aa14.7□□□□□ -0.06
SMAD4-205ENST00000588745 BCL2L13Q9BXK5 485 aa14.7□□□□□ -0.06
SMAD4-205ENST00000588745 NRAPQ86VF7 1730 aa14.69□□□□□ -0.06
SMAD4-205ENST00000588745 TWISTNBQ3B726 338 aaPredicted RBP14.69□□□□□ -0.06
SMAD4-205ENST00000588745 C20orf194Q5TEA3 1177 aa14.69□□□□□ -0.06
SMAD4-205ENST00000588745 EXOC6Q8TAG9 804 aa14.69□□□□□ -0.06
SMAD4-205ENST00000588745 SSH1Q8WYL5 1049 aa14.69□□□□□ -0.06
SMAD4-205ENST00000588745 CARD10Q9BWT7 1032 aa14.69□□□□□ -0.06
SMAD4-205ENST00000588745 SMC4Q9NTJ3 1288 aa14.69□□□□□ -0.06
SMAD4-205ENST00000588745 BABAM1Q9NWV8 329 aa14.69□□□□□ -0.06
SMAD4-205ENST00000588745 TSPYL4Q9UJ04 414 aa14.69□□□□□ -0.06
SMAD4-205ENST00000588745 SIPA1L3O60292 1781 aaPredicted RBP14.69□□□□□ -0.06
SMAD4-205ENST00000588745 SCN11AQ9UI33 1791 aa14.69□□□□□ -0.06
SMAD4-205ENST00000588745 VAMP4O75379 141 aa14.68□□□□□ -0.06
SMAD4-205ENST00000588745 TSPYL6Q8N831 410 aa14.68□□□□□ -0.06
SMAD4-205ENST00000588745 CRBNQ96SW2 442 aa14.68□□□□□ -0.06
SMAD4-205ENST00000588745 STRN4Q9NRL3 753 aa14.68□□□□□ -0.06
SMAD4-205ENST00000588745 BTG4Q9NY30 223 aa14.68□□□□□ -0.06
SMAD4-205ENST00000588745 SPG7Q9UQ90 795 aa14.68□□□□□ -0.06
SMAD4-205ENST00000588745 SHANK3Q9BYB0 1731 aa14.67□□□□□ -0.06
SMAD4-205ENST00000588745 WNK3Q9BYP7 1800 aa14.67□□□□□ -0.06
SMAD4-205ENST00000588745 EVA1CP58658 441 aa14.67□□□□□ -0.06
SMAD4-205ENST00000588745 PDE3AQ14432 1141 aa14.67□□□□□ -0.06
SMAD4-205ENST00000588745 LARP1Q6PKG0 1096 aaKnown RBP14.67□□□□□ -0.06
SMAD4-205ENST00000588745 C8orf58Q8NAV2 365 aa14.67□□□□□ -0.06
SMAD4-205ENST00000588745 FRAT1Q92837 279 aaPredicted RBP14.67□□□□□ -0.06
SMAD4-205ENST00000588745 KIF16BQ96L93 1317 aa14.67□□□□□ -0.06
SMAD4-205ENST00000588745 NWD2Q9ULI1 1742 aa14.67□□□□□ -0.06
SMAD4-205ENST00000588745 KDM6AO15550 1401 aaPredicted RBP14.66□□□□□ -0.06
SMAD4-205ENST00000588745 RNMTO43148 476 aaKnown RBP14.66□□□□□ -0.06
SMAD4-205ENST00000588745 MRC1P22897 1456 aa14.66□□□□□ -0.06
SMAD4-205ENST00000588745 TAF7Q15545 349 aaPredicted RBP14.66□□□□□ -0.06
SMAD4-205ENST00000588745 MPRIPQ6WCQ1 1025 aa14.66□□□□□ -0.06
SMAD4-205ENST00000588745 JCADQ9P266 1359 aa14.66□□□□□ -0.06
SMAD4-205ENST00000588745 PHKG2P15735 406 aa14.65□□□□□ -0.06
SMAD4-205ENST00000588745 BRPF1P55201 1214 aaPredicted RBP14.65□□□□□ -0.06
SMAD4-205ENST00000588745 TEFQ10587 303 aa14.65□□□□□ -0.06
SMAD4-205ENST00000588745 ZKSCAN2Q63HK3 967 aa14.65□□□□□ -0.06
SMAD4-205ENST00000588745 LGR6Q9HBX8 967 aa14.65□□□□□ -0.06
SMAD4-205ENST00000588745 MIS18AQ9NYP9 233 aa14.65□□□□□ -0.06
SMAD4-205ENST00000588745 ELL2O00472 640 aaPredicted RBP14.64□□□□□ -0.07
SMAD4-205ENST00000588745 IL2RBP14784 551 aa14.64□□□□□ -0.07
SMAD4-205ENST00000588745 IFNL2Q8IZJ0 200 aa14.64□□□□□ -0.07
SMAD4-205ENST00000588745 DISP2A7MBM2 1401 aa14.64□□□□□ -0.07
SMAD4-205ENST00000588745 PCDH11XQ9BZA7 1347 aa14.63□□□□□ -0.07
SMAD4-205ENST00000588745 PCDH11YQ9BZA8 1340 aa14.63□□□□□ -0.07
SMAD4-205ENST00000588745 KRT24Q2M2I5 525 aa14.63□□□□□ -0.07
SMAD4-205ENST00000588745 SOS1Q07889 1333 aaPredicted RBP14.62□□□□□ -0.07
SMAD4-205ENST00000588745 CYP27B1O15528 508 aa14.62□□□□□ -0.07
SMAD4-205ENST00000588745 ADAMTS2O95450 1211 aa14.62□□□□□ -0.07
SMAD4-205ENST00000588745 B4GALNT3Q6L9W6 998 aa14.62□□□□□ -0.07
SMAD4-205ENST00000588745 MRPL50Q8N5N7 158 aaKnown RBP14.62□□□□□ -0.07
SMAD4-205ENST00000588745 SLIT2O94813 1529 aa14.62□□□□□ -0.07
SMAD4-205ENST00000588745 HSP90AB1P08238 724 aaKnown RBP14.61□□□□□ -0.07
SMAD4-205ENST00000588745 MS4A1P11836 297 aa14.61□□□□□ -0.07
SMAD4-205ENST00000588745 PANK1Q8TE04 598 aa14.61□□□□□ -0.07
SMAD4-205ENST00000588745 NOB1Q9ULX3 412 aaKnown RBP14.61□□□□□ -0.07
SMAD4-205ENST00000588745 NUTM2BA6NNL0 878 aaPredicted RBP14.6□□□□□ -0.07
SMAD4-205ENST00000588745 NUTM2EB1AL46 878 aaPredicted RBP14.6□□□□□ -0.07
SMAD4-205ENST00000588745 IPO8O15397 1037 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms