RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077	CCDC94	Q9BW85	323 aa	Predicted RBP	11.76	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	CGN	Q9P2M7	1197 aa	Known RBP	11.76	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	ACE	P12821	1306 aa		11.76	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	NALCN	Q8IZF0	1738 aa		11.75	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	PDE3A	Q14432	1141 aa		11.75	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	RRP7A	Q9Y3A4	280 aa	Known RBP	11.75	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	MST1R	Q04912	1400 aa		11.75	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	PUS7	Q96PZ0	661 aa	Known RBP	11.75	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	CDC42BPG	Q6DT37	1551 aa		11.74	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	TAF3	Q5VWG9	929 aa		11.74	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	RGS22	Q8NE09	1264 aa		11.74	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	CCDC173	Q0VFZ6	552 aa		11.74	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	JARID2	Q92833	1246 aa	Predicted RBP	11.74	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	ANKAR	Q7Z5J8	1434 aa		11.74	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	MYOM1	P52179	1685 aa		11.74	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	NPC1L1	Q9UHC9	1359 aa		11.73	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	NPHP3	Q7Z494	1330 aa		11.73	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	CBX1	P83916	185 aa		11.73	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	KRT28	Q7Z3Y7	464 aa		11.73	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	CERS3	Q8IU89	383 aa		11.73	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	PLEKHG3	A1L390	1219 aa		11.73	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	HSP90AB1	P08238	724 aa	Known RBP	11.73	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	ISY1	Q9ULR0	285 aa	Known RBP	11.72	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	ATP7B	P35670	1465 aa		11.72	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	DYNC1I1	O14576	645 aa		11.71	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	CD2BP2	O95400	341 aa	Known RBP	11.71	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	AEBP1	Q8IUX7	1158 aa		11.71	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	PPP1R9B	Q96SB3	815 aa		11.71	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	ADGRB2	O60241	1585 aa		11.71	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	SSFA2	P28290	1259 aa		11.71	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	NUTM2G	Q5VZR2	741 aa		11.71	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	GBP4	Q96PP9	640 aa		11.71	□□□□□ -0.53
CACNA2D4-223	ENST00000588077	DDIT3	P35638	169 aa		11.71	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	XIRP1	Q702N8	1843 aa	Known RBP	11.7	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	TSC1	Q92574	1164 aa		11.7	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	IQSEC2	Q5JU85	1478 aa		11.7	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	DDX49	Q9Y6V7	483 aa	Known RBP	11.7	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	NINL	Q9Y2I6	1382 aa		11.69	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	RARS	P54136	660 aa	Known RBP	11.69	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	ABTB2	Q8N961	1025 aa		11.69	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	RWDD1	Q9H446	243 aa	Predicted RBP	11.69	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.69	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	SOX12	O15370	315 aa		11.69	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	RAB3GAP1	Q15042	981 aa		11.69	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	RBM42	Q9BTD8	480 aa	Known RBP	11.69	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	RNF216	Q9NWF9	866 aa	Predicted RBP	11.69	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	FMN2	Q9NZ56	1722 aa		11.69	□□□□□ -0.54
CACNA2D4-223	ENST00000588077		A0A1W2PP64	1363 aa		11.68	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	WWC1	Q8IX03	1113 aa		11.68	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	CNPY4	Q8N129	248 aa		11.68	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	ANKRD36B	Q8N2N9	1353 aa		11.68	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	NLRP6	P59044	892 aa		11.67	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	CAVIN1	Q6NZI2	390 aa	Known RBP	11.67	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	MPND	Q8N594	471 aa		11.66	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	LRRC59	Q96AG4	307 aa	Known RBP	11.66	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	CARD14	Q9BXL6	1004 aa		11.66	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	TTC21B	Q7Z4L5	1316 aa		11.66	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	IGSF3	O75054	1194 aa		11.66	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	APP	P05067	770 aa		11.66	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	HSPA1L	P34931	641 aa		11.66	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.66	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	FBXO41	Q8TF61	875 aa		11.66	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	RBSN	Q9H1K0	784 aa		11.66	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	GGNBP2	Q9H3C7	697 aa		11.66	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	NSD3	Q9BZ95	1437 aa		11.66	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	AK9	Q5TCS8	1911 aa		11.66	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	FAM177B	A6PVY3	158 aa		11.66	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	NME9	Q86XW9	330 aa		11.66	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	SMC5	Q8IY18	1101 aa		11.66	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	HOMEZ	Q8IX15	550 aa		11.65	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	POLR3A	O14802	1390 aa	Predicted RBP	11.65	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	RGPD8	O14715	1765 aa	Predicted RBP	11.65	□□□□□ -0.54
CACNA2D4-223	ENST00000588077	USP32	Q8NFA0	1604 aa		11.65	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	KCNJ4	P48050	445 aa		11.65	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.65	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	GAS2L2	Q8NHY3	880 aa		11.65	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	CHAMP1	Q96JM3	812 aa		11.65	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.64	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	NUTM2E	B1AL46	878 aa	Predicted RBP	11.64	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	IRX5	P78411	483 aa	Predicted RBP	11.64	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	MCTP1	Q6DN14	999 aa		11.64	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.64	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	RBM27	Q9P2N5	1060 aa	Known RBP	11.64	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	USP6	P35125	1406 aa		11.64	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	COG3	Q96JB2	828 aa		11.64	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	ZRANB1	Q9UGI0	708 aa		11.64	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	KCNG1	Q9UIX4	513 aa		11.64	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	NOL7	Q9UMY1	257 aa	Known RBP	11.64	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	TULP1	O00294	542 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	CABLES1	Q8TDN4	633 aa		11.63	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	HDAC5	Q9UQL6	1122 aa		11.63	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	ROBO1	Q9Y6N7	1651 aa		11.63	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	SOS2	Q07890	1332 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	PRIM1	P49642	420 aa	Known RBP	11.63	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	DNAJC2	Q99543	621 aa	Known RBP	11.63	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	LNPK	Q9C0E8	428 aa		11.63	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	BAG4	O95429	457 aa	Known RBP	11.63	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	MORC1	Q86VD1	984 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms