RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 YTHDC1Q96MU7 727 aaKnown RBP8.22□□□□□ -1.09
CTNS-210ENST00000576979 PSMG3-AS1Q96PY0 264 aa8.22□□□□□ -1.09
CTNS-210ENST00000576979 MAP4K5Q9Y4K4 846 aa8.22□□□□□ -1.09
CTNS-210ENST00000576979 CADPSQ9ULU8 1353 aa8.22□□□□□ -1.09
CTNS-210ENST00000576979 CC2D2AQ9P2K1 1620 aa8.21□□□□□ -1.09
CTNS-210ENST00000576979 CUL7Q14999 1698 aa8.21□□□□□ -1.09
CTNS-210ENST00000576979 KANK4Q5T7N3 995 aaPredicted RBP8.21□□□□□ -1.1
CTNS-210ENST00000576979 PPP1R26Q5T8A7 1209 aaPredicted RBP8.21□□□□□ -1.1
CTNS-210ENST00000576979 Q6ZVU0 165 aa8.21□□□□□ -1.1
CTNS-210ENST00000576979 Q8N3U1 123 aa8.21□□□□□ -1.1
CTNS-210ENST00000576979 CUEDC1Q9NWM3 386 aaPredicted RBP8.21□□□□□ -1.1
CTNS-210ENST00000576979 DNMBPQ6XZF7 1577 aa8.2□□□□□ -1.1
CTNS-210ENST00000576979 MAGEB6P1A0A0J9YX57 407 aa8.2□□□□□ -1.1
CTNS-210ENST00000576979 SRSF11Q05519 484 aaKnown RBP8.2□□□□□ -1.1
CTNS-210ENST00000576979 RSBN1LQ6PCB5 846 aaPredicted RBP8.2□□□□□ -1.1
CTNS-210ENST00000576979 CABLES1Q8TDN4 633 aa8.2□□□□□ -1.1
CTNS-210ENST00000576979 INSM2Q96T92 566 aaPredicted RBP8.2□□□□□ -1.1
CTNS-210ENST00000576979 FHAD1B1AJZ9 1412 aa8.2□□□□□ -1.1
CTNS-210ENST00000576979 TRMT44Q8IYL2 757 aaKnown RBP8.19□□□□□ -1.1
CTNS-210ENST00000576979 GALNT6Q8NCL4 622 aa8.19□□□□□ -1.1
CTNS-210ENST00000576979 CARD14Q9BXL6 1004 aa8.19□□□□□ -1.1
CTNS-210ENST00000576979 CARMIL1Q5VZK9 1371 aa8.19□□□□□ -1.1
CTNS-210ENST00000576979 EFCAB5A4FU69 1503 aa8.19□□□□□ -1.1
CTNS-210ENST00000576979 PCF11O94913 1555 aaKnown RBP8.18□□□□□ -1.1
CTNS-210ENST00000576979 SH3BP5LQ7L8J4 393 aa8.18□□□□□ -1.1
CTNS-210ENST00000576979 TBC1D2Q9BYX2 928 aa8.18□□□□□ -1.1
CTNS-210ENST00000576979 IGF1RP08069 1367 aa8.18□□□□□ -1.1
CTNS-210ENST00000576979 K7ELQ4 463 aaPredicted RBP8.17□□□□□ -1.1
CTNS-210ENST00000576979 RELBQ01201 579 aa8.17□□□□□ -1.1
CTNS-210ENST00000576979 LRRC9Q6ZRR7 1453 aa8.17□□□□□ -1.1
CTNS-210ENST00000576979 WDR97A6NE52 1622 aa8.16□□□□□ -1.1
CTNS-210ENST00000576979 RNF217Q8TC41 542 aa8.16□□□□□ -1.1
CTNS-210ENST00000576979 BEGAINQ9BUH8 593 aa8.16□□□□□ -1.1
CTNS-210ENST00000576979 FANCD2Q9BXW9 1451 aa8.16□□□□□ -1.1
CTNS-210ENST00000576979 KIF21AQ7Z4S6 1674 aa8.15□□□□□ -1.1
CTNS-210ENST00000576979 PHF20L1A8MW92 1017 aa8.15□□□□□ -1.1
CTNS-210ENST00000576979 TTLL12Q14166 644 aaPredicted RBP8.15□□□□□ -1.1
CTNS-210ENST00000576979 TSC1Q92574 1164 aa8.15□□□□□ -1.1
CTNS-210ENST00000576979 ZNF395Q9H8N7 513 aaPredicted RBP8.15□□□□□ -1.1
CTNS-210ENST00000576979 POLMQ9NP87 494 aaPredicted RBP8.15□□□□□ -1.1
CTNS-210ENST00000576979 PGPEP1Q9NXJ5 209 aa8.15□□□□□ -1.1
CTNS-210ENST00000576979 ABCA10Q8WWZ4 1543 aa8.14□□□□□ -1.11
CTNS-210ENST00000576979 FYCO1Q9BQS8 1478 aa8.14□□□□□ -1.11
CTNS-210ENST00000576979 SETD5Q9C0A6 1442 aa8.14□□□□□ -1.11
CTNS-210ENST00000576979 ITGAEP38570 1179 aa8.14□□□□□ -1.11
CTNS-210ENST00000576979 CSPP1Q1MSJ5 1256 aa8.14□□□□□ -1.11
CTNS-210ENST00000576979 ERFEQ4G0M1 354 aa8.14□□□□□ -1.11
CTNS-210ENST00000576979 ZBTB3Q9H5J0 574 aa8.14□□□□□ -1.11
CTNS-210ENST00000576979 RAB3GAP2Q9H2M9 1393 aa8.13□□□□□ -1.11
CTNS-210ENST00000576979 GPR25O00155 361 aa8.13□□□□□ -1.11
CTNS-210ENST00000576979 GJA5P36382 358 aa8.13□□□□□ -1.11
CTNS-210ENST00000576979 GIGYF2Q6Y7W6 1299 aaKnown RBP8.13□□□□□ -1.11
CTNS-210ENST00000576979 ENAMQ9NRM1 1142 aa8.13□□□□□ -1.11
CTNS-210ENST00000576979 TOPBP1Q92547 1522 aa8.13□□□□□ -1.11
CTNS-210ENST00000576979 AQRO60306 1485 aaKnown RBP eCLIP8.13□□□□□ -1.11
CTNS-210ENST00000576979 NBPF14Q5TI25 921 aa8.12□□□□□ -1.11
CTNS-210ENST00000576979 KRTAP1-3Q8IUG1 177 aa8.12□□□□□ -1.11
CTNS-210ENST00000576979 LAMC3Q9Y6N6 1575 aa8.11□□□□□ -1.11
CTNS-210ENST00000576979 FURINP09958 794 aa8.11□□□□□ -1.11
CTNS-210ENST00000576979 BAG6P46379 1132 aa8.11□□□□□ -1.11
CTNS-210ENST00000576979 FOXD4L5Q5VV16 416 aaPredicted RBP8.11□□□□□ -1.11
CTNS-210ENST00000576979 BEND7Q8N7W2 519 aaPredicted RBP8.11□□□□□ -1.11
CTNS-210ENST00000576979 MAPKBP1O60336 1514 aa8.11□□□□□ -1.11
CTNS-210ENST00000576979 ARMC2Q8NEN0 867 aa8.1□□□□□ -1.11
CTNS-210ENST00000576979 NEDD1Q8NHV4 660 aa8.1□□□□□ -1.11
CTNS-210ENST00000576979 POLA1P09884 1462 aaPredicted RBP8.1□□□□□ -1.11
CTNS-210ENST00000576979 CASKIN1Q8WXD9 1431 aa8.1□□□□□ -1.11
CTNS-210ENST00000576979 RAD54L2Q9Y4B4 1467 aa8.09□□□□□ -1.11
CTNS-210ENST00000576979 FAM50AQ14320 339 aaKnown RBP8.09□□□□□ -1.11
CTNS-210ENST00000576979 PODNQ7Z5L7 613 aa8.09□□□□□ -1.11
CTNS-210ENST00000576979 ACDQ96AP0 544 aa8.09□□□□□ -1.11
CTNS-210ENST00000576979 KCTD15Q96SI1 283 aaPredicted RBP8.09□□□□□ -1.11
CTNS-210ENST00000576979 MBIPQ9NS73 344 aa8.09□□□□□ -1.11
CTNS-210ENST00000576979 FHOD3Q2V2M9 1422 aa8.09□□□□□ -1.11
CTNS-210ENST00000576979 FMN1Q68DA7 1419 aa8.09□□□□□ -1.11
CTNS-210ENST00000576979 THOC2Q8NI27 1593 aaKnown RBP8.09□□□□□ -1.11
CTNS-210ENST00000576979 SUPT6HQ7KZ85 1726 aaKnown RBP8.09□□□□□ -1.11
CTNS-210ENST00000576979 PHLDB1Q86UU1 1377 aa8.09□□□□□ -1.12
CTNS-210ENST00000576979 ABCA5Q8WWZ7 1642 aa8.08□□□□□ -1.12
CTNS-210ENST00000576979 KRBA1A5PL33 1030 aa8.08□□□□□ -1.12
CTNS-210ENST00000576979 BCRP11274 1271 aa8.08□□□□□ -1.12
CTNS-210ENST00000576979 QPCTQ16769 361 aa8.08□□□□□ -1.12
CTNS-210ENST00000576979 RIC3Q7Z5B4 369 aa8.08□□□□□ -1.12
CTNS-210ENST00000576979 ZNF837Q96EG3 531 aaPredicted RBP8.08□□□□□ -1.12
CTNS-210ENST00000576979 ATP1B4Q9UN42 357 aaPredicted RBP8.08□□□□□ -1.12
CTNS-210ENST00000576979 LRRIQ1Q96JM4 1722 aa8.08□□□□□ -1.12
CTNS-210ENST00000576979 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.08□□□□□ -1.12
CTNS-210ENST00000576979 SAMD9Q5K651 1589 aa8.07□□□□□ -1.12
CTNS-210ENST00000576979 INTS6LQ5JSJ4 861 aaKnown RBP8.07□□□□□ -1.12
CTNS-210ENST00000576979 PRPF38BQ5VTL8 546 aaKnown RBP8.07□□□□□ -1.12
CTNS-210ENST00000576979 PBRM1Q86U86 1689 aa8.06□□□□□ -1.12
CTNS-210ENST00000576979 RHOQP17081 205 aa8.06□□□□□ -1.12
CTNS-210ENST00000576979 TMPRSS4Q9NRS4 437 aa8.06□□□□□ -1.12
CTNS-210ENST00000576979 EHBP1L1Q8N3D4 1523 aa8.05□□□□□ -1.12
CTNS-210ENST00000576979 SNRPNP63162 240 aaKnown RBP8.05□□□□□ -1.12
CTNS-210ENST00000576979 AMHR2Q16671 573 aa8.05□□□□□ -1.12
CTNS-210ENST00000576979 KDF1Q8NAX2 398 aaPredicted RBP8.05□□□□□ -1.12
CTNS-210ENST00000576979 LIMD1Q9UGP4 676 aa8.05□□□□□ -1.12
CTNS-210ENST00000576979 NESP48681 1621 aa8.04□□□□□ -1.12
CTNS-210ENST00000576979 FGD6Q6ZV73 1430 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms