RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 SLC24A1O60721 1099 aa15.12■□□□□ 0.01
CALCOCO2-228ENST00000576582 TRIM26Q12899 539 aaPredicted RBP15.12■□□□□ 0.01
CALCOCO2-228ENST00000576582 COG3Q96JB2 828 aa15.11■□□□□ 0.01
CALCOCO2-228ENST00000576582 CCNL1Q9UK58 526 aaPredicted RBP15.11■□□□□ 0.01
CALCOCO2-228ENST00000576582 QSER1Q2KHR3 1735 aa15.11■□□□□ 0.01
CALCOCO2-228ENST00000576582 A0A1W2PP64 1363 aa15.11■□□□□ 0.01
CALCOCO2-228ENST00000576582 COL24A1Q17RW2 1714 aa15.1■□□□□ 0.01
CALCOCO2-228ENST00000576582 HOXC9P31274 260 aa15.1■□□□□ 0.01
CALCOCO2-228ENST00000576582 AMPHP49418 695 aa15.1■□□□□ 0.01
CALCOCO2-228ENST00000576582 KCNQ4P56696 695 aa15.1■□□□□ 0.01
CALCOCO2-228ENST00000576582 GOLGB1Q14789 3259 aaKnown RBP15.09■□□□□ 0.01
CALCOCO2-228ENST00000576582 NLGN2Q8NFZ4 835 aa15.09■□□□□ 0.01
CALCOCO2-228ENST00000576582 CGNL1Q0VF96 1302 aa15.09■□□□□ 0.01
CALCOCO2-228ENST00000576582 MAP3K19Q56UN5 1328 aa15.09■□□□□ 0.01
CALCOCO2-228ENST00000576582 MSH5O43196 834 aa15.08■□□□□ 0
CALCOCO2-228ENST00000576582 FAM208AQ9UK61 1670 aaKnown RBP15.08■□□□□ 0
CALCOCO2-228ENST00000576582 COL23A1Q86Y22 540 aaPredicted RBP15.07■□□□□ 0
CALCOCO2-228ENST00000576582 FLAD1Q8NFF5 587 aa15.07■□□□□ 0
CALCOCO2-228ENST00000576582 NSD2O96028 1365 aa15.07■□□□□ 0
CALCOCO2-228ENST00000576582 USP47Q96K76 1375 aa15.07■□□□□ 0
CALCOCO2-228ENST00000576582 YBX3P16989 372 aaKnown RBP eCLIP15.06■□□□□ 07e-12■□□□□ 11.1
CALCOCO2-228ENST00000576582 CD2APQ9Y5K6 639 aa15.06■□□□□ 0
CALCOCO2-228ENST00000576582 TESK2Q96S53 571 aa15.05■□□□□ -0
CALCOCO2-228ENST00000576582 TONSLQ96HA7 1378 aa15.04■□□□□ -0
CALCOCO2-228ENST00000576582 IFFO2Q5TF58 517 aa15.04■□□□□ -0
CALCOCO2-228ENST00000576582 NBPF6Q5VWK0 638 aa15.04■□□□□ -0
CALCOCO2-228ENST00000576582 RAPGEF4Q8WZA2 1011 aa15.04■□□□□ -0
CALCOCO2-228ENST00000576582 NBPF4Q96M43 638 aa15.04■□□□□ -0
CALCOCO2-228ENST00000576582 CEP350Q5VT06 3117 aa15.03■□□□□ -0
CALCOCO2-228ENST00000576582 LY75O60449 1722 aa15.03■□□□□ -0
CALCOCO2-228ENST00000576582 RTL1A6NKG5 1358 aa15.03■□□□□ -0
CALCOCO2-228ENST00000576582 TATP17735 454 aaPredicted RBP15.02■□□□□ -0
CALCOCO2-228ENST00000576582 FBLN1P23142 703 aa15.02■□□□□ -0
CALCOCO2-228ENST00000576582 MEGF6O75095 1541 aa15.02□□□□□ -0.01
CALCOCO2-228ENST00000576582 ST20-MTHFSA0A0A6YYL1 179 aa15.01□□□□□ -0.01
CALCOCO2-228ENST00000576582 DOT1LQ8TEK3 1739 aa15□□□□□ -0.01
CALCOCO2-228ENST00000576582 FYB1O15117 783 aa15□□□□□ -0.01
CALCOCO2-228ENST00000576582 MSL1Q68DK7 614 aa15□□□□□ -0.01
CALCOCO2-228ENST00000576582 SMARCC1Q92922 1105 aaPredicted RBP15□□□□□ -0.01
CALCOCO2-228ENST00000576582 GPBP1L1Q9HC44 474 aaPredicted RBP15□□□□□ -0.01
CALCOCO2-228ENST00000576582 TUBGCP6Q96RT7 1819 aa15□□□□□ -0.01
CALCOCO2-228ENST00000576582 SHANK3Q9BYB0 1731 aa15□□□□□ -0.01
CALCOCO2-228ENST00000576582 SMG6Q86US8 1419 aaKnown RBP15□□□□□ -0.01
CALCOCO2-228ENST00000576582 PCDH11XQ9BZA7 1347 aa14.99□□□□□ -0.01
CALCOCO2-228ENST00000576582 PCDH11YQ9BZA8 1340 aa14.99□□□□□ -0.01
CALCOCO2-228ENST00000576582 RRS1Q15050 365 aaKnown RBP14.99□□□□□ -0.01
CALCOCO2-228ENST00000576582 ATP10DQ9P241 1426 aa14.99□□□□□ -0.01
CALCOCO2-228ENST00000576582 MPRIPQ6WCQ1 1025 aa14.98□□□□□ -0.01
CALCOCO2-228ENST00000576582 USHBP1Q8N6Y0 703 aa14.98□□□□□ -0.01
CALCOCO2-228ENST00000576582 KIF24Q5T7B8 1368 aa14.98□□□□□ -0.01
CALCOCO2-228ENST00000576582 PALLDQ8WX93 1383 aa14.98□□□□□ -0.01
CALCOCO2-228ENST00000576582 GGNBP2Q9H3C7 697 aa14.97□□□□□ -0.01
CALCOCO2-228ENST00000576582 INSRP06213 1382 aa14.97□□□□□ -0.01
CALCOCO2-228ENST00000576582 HSP90AB2PQ58FF8 381 aa14.96□□□□□ -0.01
CALCOCO2-228ENST00000576582 AK7Q96M32 723 aa14.96□□□□□ -0.01
CALCOCO2-228ENST00000576582 RGPD2P0DJD1 1756 aa14.96□□□□□ -0.02
CALCOCO2-228ENST00000576582 CYP27B1O15528 508 aa14.95□□□□□ -0.02
CALCOCO2-228ENST00000576582 NSD3Q9BZ95 1437 aa14.94□□□□□ -0.02
CALCOCO2-228ENST00000576582 HSPA6P17066 643 aa14.94□□□□□ -0.02
CALCOCO2-228ENST00000576582 TMF1P82094 1093 aa14.94□□□□□ -0.02
CALCOCO2-228ENST00000576582 NKX1-1Q15270 411 aaPredicted RBP14.94□□□□□ -0.02
CALCOCO2-228ENST00000576582 FLT4P35916 1363 aa14.94□□□□□ -0.02
CALCOCO2-228ENST00000576582 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.93□□□□□ -0.02
CALCOCO2-228ENST00000576582 CDCA8Q53HL2 280 aa14.93□□□□□ -0.02
CALCOCO2-228ENST00000576582 PIGBQ92521 554 aa14.93□□□□□ -0.02
CALCOCO2-228ENST00000576582 ADCY9O60503 1353 aa14.93□□□□□ -0.02
CALCOCO2-228ENST00000576582 C5P01031 1676 aa14.93□□□□□ -0.02
CALCOCO2-228ENST00000576582 SSFA2P28290 1259 aa14.92□□□□□ -0.02
CALCOCO2-228ENST00000576582 SPG7Q9UQ90 795 aa14.92□□□□□ -0.02
CALCOCO2-228ENST00000576582 IGSF1Q8N6C5 1336 aa14.92□□□□□ -0.02
CALCOCO2-228ENST00000576582 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.91□□□□□ -0.023e-9■□□□□ 9.4
CALCOCO2-228ENST00000576582 LOC102724428A0A0B4J2F2 783 aa14.9□□□□□ -0.02
CALCOCO2-228ENST00000576582 PHF14O94880 888 aa14.9□□□□□ -0.02
CALCOCO2-228ENST00000576582 SIK1P57059 783 aa14.9□□□□□ -0.02
CALCOCO2-228ENST00000576582 ZNF526Q8TF50 670 aaPredicted RBP14.9□□□□□ -0.02
CALCOCO2-228ENST00000576582 AMIGO3Q86WK7 504 aa14.89□□□□□ -0.03
CALCOCO2-228ENST00000576582 TAF1LQ8IZX4 1826 aa14.89□□□□□ -0.03
CALCOCO2-228ENST00000576582 C4BP0C0L5 1744 aa14.89□□□□□ -0.03
CALCOCO2-228ENST00000576582 KIF20BQ96Q89 1820 aa14.88□□□□□ -0.03
CALCOCO2-228ENST00000576582 TMOD3Q9NYL9 352 aa14.88□□□□□ -0.03
CALCOCO2-228ENST00000576582 NCAPD2Q15021 1401 aa14.87□□□□□ -0.03
CALCOCO2-228ENST00000576582 LINC00116Q8NCU8 138 aa14.87□□□□□ -0.03
CALCOCO2-228ENST00000576582 WASHC2AQ641Q2 1341 aa14.87□□□□□ -0.03
CALCOCO2-228ENST00000576582 KIF3CO14782 793 aa14.86□□□□□ -0.03
CALCOCO2-228ENST00000576582 ATP6V1AP38606 617 aa14.86□□□□□ -0.03
CALCOCO2-228ENST00000576582 TGFB2P61812 414 aa14.86□□□□□ -0.03
CALCOCO2-228ENST00000576582 EMILIN1Q9Y6C2 1016 aa14.86□□□□□ -0.03
CALCOCO2-228ENST00000576582 GNPATO15228 680 aa14.85□□□□□ -0.03
CALCOCO2-228ENST00000576582 PPM1GO15355 546 aaPredicted RBP14.85□□□□□ -0.03
CALCOCO2-228ENST00000576582 SMIM5Q71RC9 77 aa14.85□□□□□ -0.03
CALCOCO2-228ENST00000576582 IFNL2Q8IZJ0 200 aa14.85□□□□□ -0.03
CALCOCO2-228ENST00000576582 NLGN1Q8N2Q7 840 aa14.85□□□□□ -0.03
CALCOCO2-228ENST00000576582 CARD14Q9BXL6 1004 aa14.85□□□□□ -0.03
CALCOCO2-228ENST00000576582 ASAP1Q9ULH1 1129 aa14.85□□□□□ -0.03
CALCOCO2-228ENST00000576582 PKD1L3Q7Z443 1732 aa14.85□□□□□ -0.03
CALCOCO2-228ENST00000576582 ANKRD26Q9UPS8 1709 aa14.84□□□□□ -0.03
CALCOCO2-228ENST00000576582 MMP10P09238 476 aa14.84□□□□□ -0.03
CALCOCO2-228ENST00000576582 APLP1P51693 650 aa14.84□□□□□ -0.03
CALCOCO2-228ENST00000576582 TRAPPC3LQ5T215 181 aa14.84□□□□□ -0.03
CALCOCO2-228ENST00000576582 EYA1Q99502 592 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms