RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 KLHL34Q8N239 644 aa14.17□□□□□ -0.14
CALCOCO2-227ENST00000575560 LTV1Q96GA3 475 aaPredicted RBP14.17□□□□□ -0.14
CALCOCO2-227ENST00000575560 NSD2O96028 1365 aa14.17□□□□□ -0.14
CALCOCO2-227ENST00000575560 GIGYF1O75420 1035 aaPredicted RBP14.16□□□□□ -0.14
CALCOCO2-227ENST00000575560 SYTL4Q96C24 671 aaPredicted RBP14.16□□□□□ -0.14
CALCOCO2-227ENST00000575560 HOXC9P31274 260 aa14.15□□□□□ -0.14
CALCOCO2-227ENST00000575560 PELP1Q8IZL8 1130 aaKnown RBP14.15□□□□□ -0.14
CALCOCO2-227ENST00000575560 ZCRB1Q8TBF4 217 aaKnown RBP14.15□□□□□ -0.14
CALCOCO2-227ENST00000575560 MAP3K19Q56UN5 1328 aa14.15□□□□□ -0.15
CALCOCO2-227ENST00000575560 GRIN3BO60391 1043 aa14.14□□□□□ -0.15
CALCOCO2-227ENST00000575560 YBX3P16989 372 aaKnown RBP eCLIP14.14□□□□□ -0.157e-12■□□□□ 11.1
CALCOCO2-227ENST00000575560 FBLN1P23142 703 aa14.14□□□□□ -0.15
CALCOCO2-227ENST00000575560 COL23A1Q86Y22 540 aaPredicted RBP14.14□□□□□ -0.15
CALCOCO2-227ENST00000575560 COG3Q96JB2 828 aa14.13□□□□□ -0.15
CALCOCO2-227ENST00000575560 CCNL1Q9UK58 526 aaPredicted RBP14.13□□□□□ -0.15
CALCOCO2-227ENST00000575560 LY75O60449 1722 aa14.12□□□□□ -0.15
CALCOCO2-227ENST00000575560 TUBGCP6Q96RT7 1819 aa14.12□□□□□ -0.15
CALCOCO2-227ENST00000575560 FAM208AQ9UK61 1670 aaKnown RBP14.11□□□□□ -0.15
CALCOCO2-227ENST00000575560 AMPHP49418 695 aa14.11□□□□□ -0.15
CALCOCO2-227ENST00000575560 IFFO2Q5TF58 517 aa14.11□□□□□ -0.15
CALCOCO2-227ENST00000575560 NBPF6Q5VWK0 638 aa14.11□□□□□ -0.15
CALCOCO2-227ENST00000575560 NBPF4Q96M43 638 aa14.11□□□□□ -0.15
CALCOCO2-227ENST00000575560 TESK2Q96S53 571 aa14.11□□□□□ -0.15
CALCOCO2-227ENST00000575560 SHANK3Q9BYB0 1731 aa14.11□□□□□ -0.15
CALCOCO2-227ENST00000575560 MEGF6O75095 1541 aa14.1□□□□□ -0.15
CALCOCO2-227ENST00000575560 CGNL1Q0VF96 1302 aa14.1□□□□□ -0.15
CALCOCO2-227ENST00000575560 USP47Q96K76 1375 aa14.09□□□□□ -0.15
CALCOCO2-227ENST00000575560 DOT1LQ8TEK3 1739 aa14.09□□□□□ -0.15
CALCOCO2-227ENST00000575560 MSL1Q68DK7 614 aa14.08□□□□□ -0.16
CALCOCO2-227ENST00000575560 CD2APQ9Y5K6 639 aa14.08□□□□□ -0.16
CALCOCO2-227ENST00000575560 HMGB2P26583 209 aaKnown RBP14.07□□□□□ -0.16
CALCOCO2-227ENST00000575560 FLAD1Q8NFF5 587 aa14.07□□□□□ -0.16
CALCOCO2-227ENST00000575560 RTL1A6NKG5 1358 aa14.07□□□□□ -0.16
CALCOCO2-227ENST00000575560 ST20-MTHFSA0A0A6YYL1 179 aa14.06□□□□□ -0.16
CALCOCO2-227ENST00000575560 FYB1O15117 783 aa14.06□□□□□ -0.16
CALCOCO2-227ENST00000575560 SLC24A1O60721 1099 aa14.06□□□□□ -0.16
CALCOCO2-227ENST00000575560 RRS1Q15050 365 aaKnown RBP14.06□□□□□ -0.16
CALCOCO2-227ENST00000575560 USHBP1Q8N6Y0 703 aa14.06□□□□□ -0.16
CALCOCO2-227ENST00000575560 RAPGEF4Q8WZA2 1011 aa14.06□□□□□ -0.16
CALCOCO2-227ENST00000575560 RGPD2P0DJD1 1756 aa14.06□□□□□ -0.16
CALCOCO2-227ENST00000575560 ATP10DQ9P241 1426 aa14.05□□□□□ -0.16
CALCOCO2-227ENST00000575560 TATP17735 454 aaPredicted RBP14.04□□□□□ -0.16
CALCOCO2-227ENST00000575560 CYP27B1O15528 508 aa14.03□□□□□ -0.16
CALCOCO2-227ENST00000575560 HSP90AB2PQ58FF8 381 aa14.03□□□□□ -0.16
CALCOCO2-227ENST00000575560 AMIGO3Q86WK7 504 aa14.03□□□□□ -0.16
CALCOCO2-227ENST00000575560 GGNBP2Q9H3C7 697 aa14.03□□□□□ -0.16
CALCOCO2-227ENST00000575560 PCDH11XQ9BZA7 1347 aa14.03□□□□□ -0.16
CALCOCO2-227ENST00000575560 PCDH11YQ9BZA8 1340 aa14.03□□□□□ -0.16
CALCOCO2-227ENST00000575560 PALLDQ8WX93 1383 aa14.03□□□□□ -0.16
CALCOCO2-227ENST00000575560 ADCY9O60503 1353 aa14.02□□□□□ -0.17
CALCOCO2-227ENST00000575560 INSRP06213 1382 aa14.02□□□□□ -0.17
CALCOCO2-227ENST00000575560 MPRIPQ6WCQ1 1025 aa14.02□□□□□ -0.17
CALCOCO2-227ENST00000575560 GPBP1L1Q9HC44 474 aaPredicted RBP14.02□□□□□ -0.17
CALCOCO2-227ENST00000575560 TONSLQ96HA7 1378 aa14.01□□□□□ -0.17
CALCOCO2-227ENST00000575560 C5P01031 1676 aa14.01□□□□□ -0.17
CALCOCO2-227ENST00000575560 SMG6Q86US8 1419 aaKnown RBP14□□□□□ -0.17
CALCOCO2-227ENST00000575560 SMARCC1Q92922 1105 aaPredicted RBP14□□□□□ -0.17
CALCOCO2-227ENST00000575560 KIF24Q5T7B8 1368 aa13.99□□□□□ -0.17
CALCOCO2-227ENST00000575560 HSPA6P17066 643 aa13.99□□□□□ -0.17
CALCOCO2-227ENST00000575560 NKX1-1Q15270 411 aaPredicted RBP13.99□□□□□ -0.17
CALCOCO2-227ENST00000575560 SMIM5Q71RC9 77 aa13.99□□□□□ -0.17
CALCOCO2-227ENST00000575560 PIGBQ92521 554 aa13.99□□□□□ -0.17
CALCOCO2-227ENST00000575560 AK7Q96M32 723 aa13.99□□□□□ -0.17
CALCOCO2-227ENST00000575560 FLT4P35916 1363 aa13.98□□□□□ -0.17
CALCOCO2-227ENST00000575560 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.98□□□□□ -0.17
CALCOCO2-227ENST00000575560 TAF1LQ8IZX4 1826 aa13.98□□□□□ -0.17
CALCOCO2-227ENST00000575560 IGSF1Q8N6C5 1336 aa13.97□□□□□ -0.17
CALCOCO2-227ENST00000575560 SSFA2P28290 1259 aa13.97□□□□□ -0.17
CALCOCO2-227ENST00000575560 ZNF526Q8TF50 670 aaPredicted RBP13.97□□□□□ -0.17
CALCOCO2-227ENST00000575560 C4BP0C0L5 1744 aa13.97□□□□□ -0.17
CALCOCO2-227ENST00000575560 PHF14O94880 888 aa13.96□□□□□ -0.17
CALCOCO2-227ENST00000575560 TMF1P82094 1093 aa13.96□□□□□ -0.17
CALCOCO2-227ENST00000575560 LOC102724428A0A0B4J2F2 783 aa13.95□□□□□ -0.18
CALCOCO2-227ENST00000575560 SIK1P57059 783 aa13.95□□□□□ -0.18
CALCOCO2-227ENST00000575560 LINC00116Q8NCU8 138 aa13.95□□□□□ -0.18
CALCOCO2-227ENST00000575560 NCAPD2Q15021 1401 aa13.95□□□□□ -0.18
CALCOCO2-227ENST00000575560 NSD3Q9BZ95 1437 aa13.95□□□□□ -0.18
CALCOCO2-227ENST00000575560 TOGARAM1Q9Y4F4 1720 aa13.95□□□□□ -0.18
CALCOCO2-227ENST00000575560 KIF3CO14782 793 aa13.94□□□□□ -0.18
CALCOCO2-227ENST00000575560 CARD14Q9BXL6 1004 aa13.94□□□□□ -0.18
CALCOCO2-227ENST00000575560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.94□□□□□ -0.183e-9■□□□□ 9.4
CALCOCO2-227ENST00000575560 SPG7Q9UQ90 795 aa13.94□□□□□ -0.18
CALCOCO2-227ENST00000575560 EMILIN1Q9Y6C2 1016 aa13.94□□□□□ -0.18
CALCOCO2-227ENST00000575560 UBR3Q6ZT12 1888 aa13.93□□□□□ -0.18
CALCOCO2-227ENST00000575560 ITGB4P16144 1822 aa13.93□□□□□ -0.18
CALCOCO2-227ENST00000575560 ITPK1Q13572 414 aa13.93□□□□□ -0.18
CALCOCO2-227ENST00000575560 WWC3Q9ULE0 1092 aa13.93□□□□□ -0.18
CALCOCO2-227ENST00000575560 ASAP1Q9ULH1 1129 aa13.93□□□□□ -0.18
CALCOCO2-227ENST00000575560 MAP2P11137 1827 aaKnown RBP13.92□□□□□ -0.18
CALCOCO2-227ENST00000575560 WASHC2AQ641Q2 1341 aa13.91□□□□□ -0.18
CALCOCO2-227ENST00000575560 PKD1L3Q7Z443 1732 aa13.91□□□□□ -0.18
CALCOCO2-227ENST00000575560 GNPATO15228 680 aa13.91□□□□□ -0.18
CALCOCO2-227ENST00000575560 CDCA8Q53HL2 280 aa13.91□□□□□ -0.18
CALCOCO2-227ENST00000575560 EYA1Q99502 592 aa13.91□□□□□ -0.18
CALCOCO2-227ENST00000575560 TMOD3Q9NYL9 352 aa13.91□□□□□ -0.18
CALCOCO2-227ENST00000575560 MMP10P09238 476 aa13.9□□□□□ -0.18
CALCOCO2-227ENST00000575560 ATP6V1AP38606 617 aa13.9□□□□□ -0.18
CALCOCO2-227ENST00000575560 ATG3Q9NT62 314 aa13.9□□□□□ -0.18
CALCOCO2-227ENST00000575560 PPM1GO15355 546 aaPredicted RBP13.89□□□□□ -0.19
CALCOCO2-227ENST00000575560 PHKG2P15735 406 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms