RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 TNS2Q63HR2 1409 aa12.75□□□□□ -0.37
NDE1-208ENST00000573694 KAT6BQ8WYB5 2073 aa12.75□□□□□ -0.37
NDE1-208ENST00000573694 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
NDE1-208ENST00000573694 FAM208AQ9UK61 1670 aaKnown RBP12.74□□□□□ -0.37
NDE1-208ENST00000573694 ADAMTS8Q9UP79 889 aa12.74□□□□□ -0.37
NDE1-208ENST00000573694 AMPHP49418 695 aa12.73□□□□□ -0.37
NDE1-208ENST00000573694 MTHFSP49914 203 aa12.73□□□□□ -0.37
NDE1-208ENST00000573694 LRRC37A3O60309 1634 aa12.73□□□□□ -0.37
NDE1-208ENST00000573694 MAP3K19Q56UN5 1328 aa12.72□□□□□ -0.37
NDE1-208ENST00000573694 SOX12O15370 315 aa12.72□□□□□ -0.37
NDE1-208ENST00000573694 HOXC9P31274 260 aa12.72□□□□□ -0.37
NDE1-208ENST00000573694 R3HDM1Q15032 1099 aaKnown RBP12.72□□□□□ -0.37
NDE1-208ENST00000573694 SMG6Q86US8 1419 aaKnown RBP12.71□□□□□ -0.37
NDE1-208ENST00000573694 RREB1Q92766 1687 aa12.71□□□□□ -0.37
NDE1-208ENST00000573694 SLC27A3Q5K4L6 730 aa12.71□□□□□ -0.37
NDE1-208ENST00000573694 CCDC146Q8IYE0 955 aa12.71□□□□□ -0.37
NDE1-208ENST00000573694 SPON1Q9HCB6 807 aa12.71□□□□□ -0.37
NDE1-208ENST00000573694 SALL2Q9Y467 1007 aaPredicted RBP12.71□□□□□ -0.37
NDE1-208ENST00000573694 SBF2Q86WG5 1849 aa12.71□□□□□ -0.38
NDE1-208ENST00000573694 WNK3Q9BYP7 1800 aa12.71□□□□□ -0.38
NDE1-208ENST00000573694 FBLN1P23142 703 aa12.7□□□□□ -0.38
NDE1-208ENST00000573694 FLT4P35916 1363 aa12.69□□□□□ -0.38
NDE1-208ENST00000573694 LTN1O94822 1766 aa12.69□□□□□ -0.38
NDE1-208ENST00000573694 RGPD5Q99666 1765 aa12.69□□□□□ -0.38
NDE1-208ENST00000573694 CFAP53Q96M91 514 aa12.69□□□□□ -0.38
NDE1-208ENST00000573694 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.69□□□□□ -0.38
NDE1-208ENST00000573694 PSDA5PKW4 1024 aaPredicted RBP12.68□□□□□ -0.38
NDE1-208ENST00000573694 KCNQ2O43526 872 aa12.68□□□□□ -0.38
NDE1-208ENST00000573694 TXNRD1Q16881 649 aa12.68□□□□□ -0.38
NDE1-208ENST00000573694 ZCRB1Q8TBF4 217 aaKnown RBP12.68□□□□□ -0.38
NDE1-208ENST00000573694 PROM2Q8N271 834 aa12.67□□□□□ -0.38
NDE1-208ENST00000573694 SLC16A10Q8TF71 515 aa12.67□□□□□ -0.38
NDE1-208ENST00000573694 RAPGEF4Q8WZA2 1011 aa12.67□□□□□ -0.38
NDE1-208ENST00000573694 STK32BQ9NY57 414 aa12.67□□□□□ -0.38
NDE1-208ENST00000573694 DCAF8L1A6NGE4 600 aa12.66□□□□□ -0.38
NDE1-208ENST00000573694 SLC15A2Q16348 729 aa12.66□□□□□ -0.38
NDE1-208ENST00000573694 NUDCQ9Y266 331 aa12.66□□□□□ -0.38
NDE1-208ENST00000573694 EMILIN1Q9Y6C2 1016 aa12.66□□□□□ -0.38
NDE1-208ENST00000573694 NUP188Q5SRE5 1749 aa12.65□□□□□ -0.38
NDE1-208ENST00000573694 POLKQ9UBT6 870 aa12.65□□□□□ -0.38
NDE1-208ENST00000573694 TATP17735 454 aaPredicted RBP12.64□□□□□ -0.39
NDE1-208ENST00000573694 RRS1Q15050 365 aaKnown RBP12.64□□□□□ -0.39
NDE1-208ENST00000573694 NHSQ6T4R5 1651 aa12.64□□□□□ -0.39
NDE1-208ENST00000573694 DLG5Q8TDM6 1919 aa12.63□□□□□ -0.39
NDE1-208ENST00000573694 APAF1O14727 1248 aa12.63□□□□□ -0.39
NDE1-208ENST00000573694 CDCA7LQ96GN5 454 aa12.63□□□□□ -0.39
NDE1-208ENST00000573694 SUPT16HQ9Y5B9 1047 aaKnown RBP12.63□□□□□ -0.39
NDE1-208ENST00000573694 ZNF521Q96K83 1311 aa12.62□□□□□ -0.39
NDE1-208ENST00000573694 PCDH11XQ9BZA7 1347 aa12.62□□□□□ -0.39
NDE1-208ENST00000573694 PCDH11YQ9BZA8 1340 aa12.62□□□□□ -0.39
NDE1-208ENST00000573694 NCAPD2Q15021 1401 aa12.62□□□□□ -0.39
NDE1-208ENST00000573694 PPM1GO15355 546 aaPredicted RBP12.62□□□□□ -0.39
NDE1-208ENST00000573694 U2AF1L5P0DN76 240 aaPredicted RBP12.62□□□□□ -0.39
NDE1-208ENST00000573694 U2AF1Q01081 240 aaKnown RBP eCLIP12.62□□□□□ -0.39
NDE1-208ENST00000573694 NBPF6Q5VWK0 638 aa12.62□□□□□ -0.39
NDE1-208ENST00000573694 NBPF4Q96M43 638 aa12.62□□□□□ -0.39
NDE1-208ENST00000573694 MTFR1LQ9H019 292 aa12.62□□□□□ -0.39
NDE1-208ENST00000573694 U2SURPO15042 1029 aaKnown RBP12.61□□□□□ -0.39
NDE1-208ENST00000573694 DIAPH1O60610 1272 aaKnown RBP12.61□□□□□ -0.39
NDE1-208ENST00000573694 NKX1-1Q15270 411 aaPredicted RBP12.61□□□□□ -0.39
NDE1-208ENST00000573694 DDX54Q8TDD1 881 aaKnown RBP12.61□□□□□ -0.39
NDE1-208ENST00000573694 SMARCC1Q92922 1105 aaPredicted RBP12.61□□□□□ -0.39
NDE1-208ENST00000573694 RUNDC1Q96C34 613 aa12.61□□□□□ -0.39
NDE1-208ENST00000573694 SPG7Q9UQ90 795 aa12.61□□□□□ -0.39
NDE1-208ENST00000573694 FKBP8Q14318 412 aa12.6□□□□□ -0.39
NDE1-208ENST00000573694 HSP90AB2PQ58FF8 381 aa12.6□□□□□ -0.39
NDE1-208ENST00000573694 FLAD1Q8NFF5 587 aa12.6□□□□□ -0.39
NDE1-208ENST00000573694 LTV1Q96GA3 475 aaPredicted RBP12.6□□□□□ -0.39
NDE1-208ENST00000573694 PPP1R1BQ9UD71 204 aaPredicted RBP12.6□□□□□ -0.39
NDE1-208ENST00000573694 IRX6P78412 446 aaPredicted RBP12.59□□□□□ -0.39
NDE1-208ENST00000573694 RRP7AQ9Y3A4 280 aaKnown RBP12.59□□□□□ -0.39
NDE1-208ENST00000573694 MAP3K5Q99683 1374 aa12.58□□□□□ -0.4
NDE1-208ENST00000573694 NEFLP07196 543 aa12.58□□□□□ -0.4
NDE1-208ENST00000573694 PRIM1P49642 420 aaKnown RBP12.58□□□□□ -0.4
NDE1-208ENST00000573694 PTF1AQ7RTS3 328 aa12.58□□□□□ -0.4
NDE1-208ENST00000573694 RGPD2P0DJD1 1756 aa12.57□□□□□ -0.4
NDE1-208ENST00000573694 HSP90AB1P08238 724 aaKnown RBP12.57□□□□□ -0.4
NDE1-208ENST00000573694 IL13P35225 146 aa12.57□□□□□ -0.4
NDE1-208ENST00000573694 AKT1S1Q96B36 256 aa12.57□□□□□ -0.4
NDE1-208ENST00000573694 ACSBG1Q96GR2 724 aa12.57□□□□□ -0.4
NDE1-208ENST00000573694 PLEKHF1Q96S99 279 aa12.57□□□□□ -0.4
NDE1-208ENST00000573694 ANO8Q9HCE9 1232 aaPredicted RBP12.57□□□□□ -0.4
NDE1-208ENST00000573694 AMOTQ4VCS5 1084 aa12.56□□□□□ -0.4
NDE1-208ENST00000573694 PTGER2P43116 358 aa12.55□□□□□ -0.4
NDE1-208ENST00000573694 NEUROD2Q15784 382 aa12.55□□□□□ -0.4
NDE1-208ENST00000573694 IFNL2Q8IZJ0 200 aa12.55□□□□□ -0.4
NDE1-208ENST00000573694 SGIP1Q9BQI5 828 aa12.55□□□□□ -0.4
NDE1-208ENST00000573694 RSPH6AQ9H0K4 717 aa12.55□□□□□ -0.4
NDE1-208ENST00000573694 SPINK5Q9NQ38 1064 aaPredicted RBP12.55□□□□□ -0.4
NDE1-208ENST00000573694 MEGF6O75095 1541 aa12.55□□□□□ -0.4
NDE1-208ENST00000573694 BTAF1O14981 1849 aa12.55□□□□□ -0.4
NDE1-208ENST00000573694 CASZ1Q86V15 1759 aa12.54□□□□□ -0.4
NDE1-208ENST00000573694 HMOX1P09601 288 aa12.54□□□□□ -0.4
NDE1-208ENST00000573694 GOLGA2Q08379 1002 aa12.54□□□□□ -0.4
NDE1-208ENST00000573694 EIF4A2Q14240 407 aaKnown RBP12.54□□□□□ -0.4
NDE1-208ENST00000573694 DUSP27Q5VZP5 1158 aa12.54□□□□□ -0.4
NDE1-208ENST00000573694 EYA1Q99502 592 aa12.54□□□□□ -0.4
NDE1-208ENST00000573694 LRRC4BQ9NT99 713 aa12.54□□□□□ -0.4
NDE1-208ENST00000573694 QSER1Q2KHR3 1735 aa12.54□□□□□ -0.4
NDE1-208ENST00000573694 PAPPAQ13219 1627 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms