RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 NISCHQ9Y2I1 1504 aa22.67■■□□□ 1.22
NDE1-208ENST00000573694 CCDC180Q9P1Z9 1646 aa20.31■□□□□ 0.84
NDE1-208ENST00000573694 ABCC9O60706 1549 aa19.97■□□□□ 0.79
NDE1-208ENST00000573694 RB1CC1Q8TDY2 1594 aa19.27■□□□□ 0.67
NDE1-208ENST00000573694 NACADO15069 1562 aa19.23■□□□□ 0.67
NDE1-208ENST00000573694 MYO15BQ96JP2 1530 aa19.15■□□□□ 0.66
NDE1-208ENST00000573694 DCAF8L2P0C7V8 631 aa18.92■□□□□ 0.62
NDE1-208ENST00000573694 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
NDE1-208ENST00000573694 DNAJC5BQ9UF47 199 aa18.82■□□□□ 0.6
NDE1-208ENST00000573694 ZCCHC6Q5VYS8 1495 aaKnown RBP18.79■□□□□ 0.6
NDE1-208ENST00000573694 SHROOM4Q9ULL8 1493 aa18.67■□□□□ 0.58
NDE1-208ENST00000573694 UNC13AQ9UPW8 1703 aa18.6■□□□□ 0.57
NDE1-208ENST00000573694 PABPN1Q86U42 306 aaKnown RBP eCLIP18.6■□□□□ 0.57
NDE1-208ENST00000573694 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
NDE1-208ENST00000573694 SCRIBQ14160 1630 aa18.27■□□□□ 0.52
NDE1-208ENST00000573694 EIF4G1Q04637 1599 aaKnown RBP18.14■□□□□ 0.49
NDE1-208ENST00000573694 CC2D2AQ9P2K1 1620 aa18.1■□□□□ 0.49
NDE1-208ENST00000573694 CECR2Q9BXF3 1484 aa18.08■□□□□ 0.49
NDE1-208ENST00000573694 NCAPD3P42695 1498 aa17.77■□□□□ 0.44
NDE1-208ENST00000573694 SMARCA2P51531 1590 aa17.66■□□□□ 0.42
NDE1-208ENST00000573694 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
NDE1-208ENST00000573694 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
NDE1-208ENST00000573694 HMGXB3Q12766 1538 aa17.6■□□□□ 0.41
NDE1-208ENST00000573694 SMARCA4P51532 1647 aa17.58■□□□□ 0.41
NDE1-208ENST00000573694 PEG3Q9GZU2 1588 aa17.56■□□□□ 0.4
NDE1-208ENST00000573694 BAZ1BQ9UIG0 1483 aaKnown RBP17.44■□□□□ 0.38
NDE1-208ENST00000573694 DNAJC5Q9H3Z4 198 aa17.44■□□□□ 0.38
NDE1-208ENST00000573694 CUX2O14529 1486 aa17.39■□□□□ 0.37
NDE1-208ENST00000573694 MROH2BQ7Z745 1585 aa17.35■□□□□ 0.37
NDE1-208ENST00000573694 ERCC6Q03468 1493 aa17.32■□□□□ 0.36
NDE1-208ENST00000573694 LAMC3Q9Y6N6 1575 aa17.29■□□□□ 0.36
NDE1-208ENST00000573694 PDS5BQ9NTI5 1447 aa17.24■□□□□ 0.35
NDE1-208ENST00000573694 CADPSQ9ULU8 1353 aa17.2■□□□□ 0.34
NDE1-208ENST00000573694 NESP48681 1621 aa17.15■□□□□ 0.34
NDE1-208ENST00000573694 RSF1Q96T23 1441 aaPredicted RBP17.13■□□□□ 0.33
NDE1-208ENST00000573694 WIZO95785 1651 aa17.08■□□□□ 0.32
NDE1-208ENST00000573694 THOC2Q8NI27 1593 aaKnown RBP17.02■□□□□ 0.32
NDE1-208ENST00000573694 TOP2AP11388 1531 aaKnown RBP17.02■□□□□ 0.32
NDE1-208ENST00000573694 CFTRP13569 1480 aa17.02■□□□□ 0.32
NDE1-208ENST00000573694 SUPT5HO00267 1087 aaKnown RBP17.02■□□□□ 0.32
NDE1-208ENST00000573694 MRC2Q9UBG0 1479 aa16.98■□□□□ 0.31
NDE1-208ENST00000573694 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
NDE1-208ENST00000573694 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
NDE1-208ENST00000573694 WDR62O43379 1518 aa16.92■□□□□ 0.3
NDE1-208ENST00000573694 FANCD2Q9BXW9 1451 aa16.91■□□□□ 0.3
NDE1-208ENST00000573694 CCDC88BA6NC98 1476 aa16.8■□□□□ 0.28
NDE1-208ENST00000573694 ABCC8Q09428 1581 aa16.79■□□□□ 0.28
NDE1-208ENST00000573694 PRDM2Q13029 1718 aa16.75■□□□□ 0.27
NDE1-208ENST00000573694 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
NDE1-208ENST00000573694 IFT140Q96RY7 1462 aa16.65■□□□□ 0.26
NDE1-208ENST00000573694 OSCARQ8IYS5 282 aa16.63■□□□□ 0.25
NDE1-208ENST00000573694 TOPBP1Q92547 1522 aa16.59■□□□□ 0.25
NDE1-208ENST00000573694 DNMBPQ6XZF7 1577 aa16.56■□□□□ 0.24
NDE1-208ENST00000573694 TRIM41Q8WV44 630 aa16.48■□□□□ 0.23
NDE1-208ENST00000573694 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
NDE1-208ENST00000573694 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
NDE1-208ENST00000573694 ZNF608Q9ULD9 1512 aaPredicted RBP16.42■□□□□ 0.22
NDE1-208ENST00000573694 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
NDE1-208ENST00000573694 SOGA1O94964 1423 aa16.41■□□□□ 0.22
NDE1-208ENST00000573694 EIF4G3O43432 1585 aaKnown RBP16.35■□□□□ 0.21
NDE1-208ENST00000573694 AQRO60306 1485 aaKnown RBP eCLIP16.33■□□□□ 0.24e-7■□□□□ 10.5
NDE1-208ENST00000573694 FGD5Q6ZNL6 1462 aa16.31■□□□□ 0.2
NDE1-208ENST00000573694 CUX1P39880 1505 aa16.3■□□□□ 0.2
NDE1-208ENST00000573694 CHIC1Q5VXU3 224 aa16.3■□□□□ 0.2
NDE1-208ENST00000573694 MAGI1Q96QZ7 1491 aaPredicted RBP16.29■□□□□ 0.2
NDE1-208ENST00000573694 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
NDE1-208ENST00000573694 TDRD9Q8NDG6 1382 aaKnown RBP16.27■□□□□ 0.2
NDE1-208ENST00000573694 RAD54L2Q9Y4B4 1467 aa16.27■□□□□ 0.19
NDE1-208ENST00000573694 WRNQ14191 1432 aaPredicted RBP eCLIP16.25■□□□□ 0.19
NDE1-208ENST00000573694 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
NDE1-208ENST00000573694 RIMBP3CA6NJZ7 1639 aa16.24■□□□□ 0.19
NDE1-208ENST00000573694 RIMBP3BA6NNM3 1639 aa16.24■□□□□ 0.19
NDE1-208ENST00000573694 RIMBP3Q9UFD9 1639 aa16.24■□□□□ 0.19
NDE1-208ENST00000573694 CHMP7Q8WUX9 453 aaPredicted RBP16.23■□□□□ 0.19
NDE1-208ENST00000573694 ARHGEF11O15085 1522 aa16.21■□□□□ 0.19
NDE1-208ENST00000573694 GAPVD1Q14C86 1478 aa16.21■□□□□ 0.19
NDE1-208ENST00000573694 SYNJ2O15056 1496 aa16.2■□□□□ 0.18
NDE1-208ENST00000573694 FBLN2P98095 1184 aa16.19■□□□□ 0.18
NDE1-208ENST00000573694 SNAPC4Q5SXM2 1469 aa16.16■□□□□ 0.18
NDE1-208ENST00000573694 SYNJ1O43426 1573 aa16.16■□□□□ 0.18
NDE1-208ENST00000573694 TOP2BQ02880 1626 aa16.16■□□□□ 0.18
NDE1-208ENST00000573694 CHD1O14646 1710 aa16.15■□□□□ 0.18
NDE1-208ENST00000573694 BIVM-ERCC5R4GMW8 1640 aa16.12■□□□□ 0.17
NDE1-208ENST00000573694 ABCA5Q8WWZ7 1642 aa16.11■□□□□ 0.17
NDE1-208ENST00000573694 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
NDE1-208ENST00000573694 CYB5RLQ6IPT4 315 aa16.08■□□□□ 0.16
NDE1-208ENST00000573694 ERICH3Q5RHP9 1530 aa16.08■□□□□ 0.16
NDE1-208ENST00000573694 FHAD1B1AJZ9 1412 aa16.06■□□□□ 0.16
NDE1-208ENST00000573694 PBRM1Q86U86 1689 aa16.05■□□□□ 0.16
NDE1-208ENST00000573694 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
NDE1-208ENST00000573694 GRIN2AQ12879 1464 aa16.02■□□□□ 0.15
NDE1-208ENST00000573694 NUP160Q12769 1436 aa16.01■□□□□ 0.15
NDE1-208ENST00000573694 ADAMTS12P58397 1594 aa15.96■□□□□ 0.15
NDE1-208ENST00000573694 KIF27Q86VH2 1401 aa15.93■□□□□ 0.14
NDE1-208ENST00000573694 IGF1RP08069 1367 aa15.87■□□□□ 0.13
NDE1-208ENST00000573694 SHROOM2Q13796 1616 aa15.87■□□□□ 0.13
NDE1-208ENST00000573694 JPH4Q96JJ6 628 aa15.87■□□□□ 0.13
NDE1-208ENST00000573694 CEP170Q5SW79 1584 aa15.85■□□□□ 0.13
NDE1-208ENST00000573694 TRHP20396 242 aaPredicted RBP15.84■□□□□ 0.13
NDE1-208ENST00000573694 KIAA0586Q9BVV6 1533 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms