RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 UPF2Q9HAU5 1272 aaKnown RBP22.47■■□□□ 1.19
CMTM3-214ENST00000567572 GNAI1P63096 354 aa22.46■■□□□ 1.19
CMTM3-214ENST00000567572 EYA1Q99502 592 aa22.46■■□□□ 1.19
CMTM3-214ENST00000567572 CHMP4BQ9H444 224 aaKnown RBP22.44■■□□□ 1.18
CMTM3-214ENST00000567572 BECN1Q14457 450 aa22.43■■□□□ 1.18
CMTM3-214ENST00000567572 KCNH5Q8NCM2 988 aa22.43■■□□□ 1.18
CMTM3-214ENST00000567572 FAM83GA6ND36 823 aa22.43■■□□□ 1.18
CMTM3-214ENST00000567572 ATF3P18847 181 aa22.43■■□□□ 1.18
CMTM3-214ENST00000567572 CFAP44Q96MT7 982 aa22.43■■□□□ 1.18
CMTM3-214ENST00000567572 ALS2Q96Q42 1657 aa22.42■■□□□ 1.18
CMTM3-214ENST00000567572 XIRP1Q702N8 1843 aaKnown RBP22.41■■□□□ 1.18
CMTM3-214ENST00000567572 XPCQ01831 940 aaPredicted RBP22.41■■□□□ 1.18
CMTM3-214ENST00000567572 MBIPQ9NS73 344 aa22.41■■□□□ 1.18
CMTM3-214ENST00000567572 IP6K1Q92551 441 aa22.41■■□□□ 1.18
CMTM3-214ENST00000567572 NOB1Q9ULX3 412 aaKnown RBP22.41■■□□□ 1.18
CMTM3-214ENST00000567572 KRT28Q7Z3Y7 464 aa22.4■■□□□ 1.18
CMTM3-214ENST00000567572 ITPRIPQ8IWB1 547 aa22.4■■□□□ 1.18
CMTM3-214ENST00000567572 SMC5Q8IY18 1101 aa22.4■■□□□ 1.18
CMTM3-214ENST00000567572 ARHGAP45Q92619 1136 aa22.4■■□□□ 1.18
CMTM3-214ENST00000567572 DCTN1Q14203 1278 aa22.39■■□□□ 1.18
CMTM3-214ENST00000567572 ZBTB40Q9NUA8 1239 aa22.39■■□□□ 1.18
CMTM3-214ENST00000567572 NFKBIBQ15653 356 aa22.39■■□□□ 1.17
CMTM3-214ENST00000567572 MTHFSDQ2M296 383 aaKnown RBP22.37■■□□□ 1.17
CMTM3-214ENST00000567572 CADPS2Q86UW7 1296 aa22.37■■□□□ 1.17
CMTM3-214ENST00000567572 TBC1D32Q96NH3 1257 aa22.37■■□□□ 1.17
CMTM3-214ENST00000567572 MSH6P52701 1360 aa22.36■■□□□ 1.17
CMTM3-214ENST00000567572 GCP02774 474 aa22.36■■□□□ 1.17
CMTM3-214ENST00000567572 TMEM57Q8N5G2 664 aa22.36■■□□□ 1.17
CMTM3-214ENST00000567572 CRB1P82279 1406 aa22.36■■□□□ 1.17
CMTM3-214ENST00000567572 VAMP4O75379 141 aa22.35■■□□□ 1.17
CMTM3-214ENST00000567572 SLC4A3P48751 1232 aa22.35■■□□□ 1.17
CMTM3-214ENST00000567572 GAS2L2Q8NHY3 880 aa22.35■■□□□ 1.17
CMTM3-214ENST00000567572 LRRC37A3O60309 1634 aa22.35■■□□□ 1.17
CMTM3-214ENST00000567572 SEC24BO95487 1268 aa22.34■■□□□ 1.17
CMTM3-214ENST00000567572 MCM10Q7L590 875 aa22.34■■□□□ 1.17
CMTM3-214ENST00000567572 ARHGEF25Q86VW2 580 aa22.34■■□□□ 1.17
CMTM3-214ENST00000567572 TSPYL6Q8N831 410 aa22.33■■□□□ 1.17
CMTM3-214ENST00000567572 LTV1Q96GA3 475 aaPredicted RBP22.33■■□□□ 1.17
CMTM3-214ENST00000567572 CHL1O00533 1208 aa22.33■■□□□ 1.16
CMTM3-214ENST00000567572 MED1Q15648 1581 aaPredicted RBP22.33■■□□□ 1.16
CMTM3-214ENST00000567572 LMOD2Q6P5Q4 547 aa22.31■■□□□ 1.16
CMTM3-214ENST00000567572 C8orf58Q8NAV2 365 aa22.31■■□□□ 1.16
CMTM3-214ENST00000567572 HTATSF1O43719 755 aaKnown RBP22.3■■□□□ 1.16
CMTM3-214ENST00000567572 TWISTNBQ3B726 338 aaPredicted RBP22.3■■□□□ 1.16
CMTM3-214ENST00000567572 NCAPD2Q15021 1401 aa22.3■■□□□ 1.16
CMTM3-214ENST00000567572 PXDNQ92626 1479 aa22.3■■□□□ 1.16
CMTM3-214ENST00000567572 RGPD2P0DJD1 1756 aa22.29■■□□□ 1.16
CMTM3-214ENST00000567572 HAP1P54257 671 aaPredicted RBP22.29■■□□□ 1.16
CMTM3-214ENST00000567572 NPHP3Q7Z494 1330 aa22.29■■□□□ 1.16
CMTM3-214ENST00000567572 MRPL50Q8N5N7 158 aaKnown RBP22.29■■□□□ 1.16
CMTM3-214ENST00000567572 CAMTA1Q9Y6Y1 1673 aa22.29■■□□□ 1.16
CMTM3-214ENST00000567572 KIAA0232Q92628 1395 aa22.29■■□□□ 1.16
CMTM3-214ENST00000567572 NUCB1Q02818 461 aa22.28■■□□□ 1.16
CMTM3-214ENST00000567572 NBPF6Q5VWK0 638 aa22.28■■□□□ 1.16
CMTM3-214ENST00000567572 RTF1Q92541 710 aaKnown RBP22.28■■□□□ 1.16
CMTM3-214ENST00000567572 NBPF4Q96M43 638 aa22.28■■□□□ 1.16
CMTM3-214ENST00000567572 ABCC4O15439 1325 aa22.28■■□□□ 1.16
CMTM3-214ENST00000567572 USHBP1Q8N6Y0 703 aa22.27■■□□□ 1.16
CMTM3-214ENST00000567572 TNS3Q68CZ2 1445 aa22.27■■□□□ 1.16
CMTM3-214ENST00000567572 GSE1Q14687 1217 aa22.27■■□□□ 1.16
CMTM3-214ENST00000567572 MAP3K5Q99683 1374 aa22.26■■□□□ 1.15
CMTM3-214ENST00000567572 ZNF335Q9H4Z2 1342 aaPredicted RBP22.26■■□□□ 1.15
CMTM3-214ENST00000567572 ZBTB7CA1YPR0 619 aa22.26■■□□□ 1.15
CMTM3-214ENST00000567572 DDX17Q92841 729 aaKnown RBP22.26■■□□□ 1.15
CMTM3-214ENST00000567572 GCC1Q96CN9 775 aa22.26■■□□□ 1.15
CMTM3-214ENST00000567572 CRYBG1Q9Y4K1 1723 aa22.26■■□□□ 1.15
CMTM3-214ENST00000567572 GNAT3A8MTJ3 354 aa22.25■■□□□ 1.15
CMTM3-214ENST00000567572 ELL2O00472 640 aaPredicted RBP22.25■■□□□ 1.15
CMTM3-214ENST00000567572 API5Q9BZZ5 524 aaKnown RBP22.25■■□□□ 1.15
CMTM3-214ENST00000567572 ZBTB7BO15156 539 aaPredicted RBP22.23■■□□□ 1.15
CMTM3-214ENST00000567572 LMO7Q8WWI1 1683 aa22.22■■□□□ 1.15
CMTM3-214ENST00000567572 LRRC59Q96AG4 307 aaKnown RBP22.22■■□□□ 1.15
CMTM3-214ENST00000567572 PLEKHG5O94827 1062 aa22.21■■□□□ 1.15
CMTM3-214ENST00000567572 ANKRD24Q8TF21 1146 aa22.21■■□□□ 1.15
CMTM3-214ENST00000567572 RGPD5Q99666 1765 aa22.21■■□□□ 1.15
CMTM3-214ENST00000567572 BRINP3Q76B58 766 aa22.21■■□□□ 1.15
CMTM3-214ENST00000567572 CHD1LQ86WJ1 897 aa22.21■■□□□ 1.15
CMTM3-214ENST00000567572 AXIN2Q9Y2T1 843 aa22.21■■□□□ 1.15
CMTM3-214ENST00000567572 ABCC6O95255 1503 aa22.21■■□□□ 1.15
CMTM3-214ENST00000567572 SPATA31A3Q5VYP0 1347 aa22.21■■□□□ 1.15
CMTM3-214ENST00000567572 KRT24Q2M2I5 525 aa22.2■■□□□ 1.14
CMTM3-214ENST00000567572 C22orf23Q9BZE7 217 aa22.2■■□□□ 1.14
CMTM3-214ENST00000567572 COL18A1P39060 1754 aa22.2■■□□□ 1.14
CMTM3-214ENST00000567572 ANTXR1Q9H6X2 564 aa22.19■■□□□ 1.14
CMTM3-214ENST00000567572 TSPYL4Q9UJ04 414 aa22.19■■□□□ 1.14
CMTM3-214ENST00000567572 BMP2KLQ5H9B9 411 aa22.19■■□□□ 1.14
CMTM3-214ENST00000567572 IL17REQ8NFR9 667 aa22.19■■□□□ 1.14
CMTM3-214ENST00000567572 EIF5BO60841 1220 aaKnown RBP22.18■■□□□ 1.14
CMTM3-214ENST00000567572 TBC1D2Q9BYX2 928 aa22.18■■□□□ 1.14
CMTM3-214ENST00000567572 MIS18AQ9NYP9 233 aa22.18■■□□□ 1.14
CMTM3-214ENST00000567572 CEMIPQ8WUJ3 1361 aa22.18■■□□□ 1.14
CMTM3-214ENST00000567572 ERBB3P21860 1342 aa22.17■■□□□ 1.14
CMTM3-214ENST00000567572 FRAT2O75474 233 aaPredicted RBP22.17■■□□□ 1.14
CMTM3-214ENST00000567572 ZC3H6P61129 1189 aaKnown RBP22.17■■□□□ 1.14
CMTM3-214ENST00000567572 BABAM1Q9NWV8 329 aa22.17■■□□□ 1.14
CMTM3-214ENST00000567572 SLAIN2Q9P270 581 aa22.16■■□□□ 1.14
CMTM3-214ENST00000567572 RBM25P49756 843 aaKnown RBP22.14■■□□□ 1.14
CMTM3-214ENST00000567572 AMOTQ4VCS5 1084 aa22.14■■□□□ 1.13
CMTM3-214ENST00000567572 CPDO75976 1380 aa22.13■■□□□ 1.13
CMTM3-214ENST00000567572 FAM208AQ9UK61 1670 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms