RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 TRIM35Q9UPQ4 493 aa8.11□□□□□ -1.11
GINS3-206ENST00000567143 COL14A1Q05707 1796 aaKnown RBP8.11□□□□□ -1.11
GINS3-206ENST00000567143 EVC2Q86UK5 1308 aa8.11□□□□□ -1.11
GINS3-206ENST00000567143 PLEKHG2Q9H7P9 1386 aa8.11□□□□□ -1.11
GINS3-206ENST00000567143 COL18A1P39060 1754 aa8.1□□□□□ -1.11
GINS3-206ENST00000567143 FAM83GA6ND36 823 aa8.1□□□□□ -1.11
GINS3-206ENST00000567143 ZRANB1Q9UGI0 708 aa8.1□□□□□ -1.11
GINS3-206ENST00000567143 NPHP3Q7Z494 1330 aa8.1□□□□□ -1.11
GINS3-206ENST00000567143 ARHGEF10O15013 1369 aa8.1□□□□□ -1.11
GINS3-206ENST00000567143 FOXD4L6Q3SYB3 417 aaPredicted RBP8.1□□□□□ -1.11
GINS3-206ENST00000567143 FOXD4L3Q6VB84 417 aaPredicted RBP8.1□□□□□ -1.11
GINS3-206ENST00000567143 WAPLQ7Z5K2 1190 aa8.1□□□□□ -1.11
GINS3-206ENST00000567143 CHAMP1Q96JM3 812 aa8.1□□□□□ -1.11
GINS3-206ENST00000567143 ARID3AQ99856 593 aa8.1□□□□□ -1.11
GINS3-206ENST00000567143 CHMP5Q9NZZ3 219 aa8.1□□□□□ -1.11
GINS3-206ENST00000567143 DDX19BQ9UMR2 479 aa8.1□□□□□ -1.11
GINS3-206ENST00000567143 PLEKHG5O94827 1062 aa8.1□□□□□ -1.11
GINS3-206ENST00000567143 FAM43AQ8N2R8 423 aa8.1□□□□□ -1.11
GINS3-206ENST00000567143 USP6P35125 1406 aa8.09□□□□□ -1.11
GINS3-206ENST00000567143 LRP6O75581 1613 aa8.09□□□□□ -1.11
GINS3-206ENST00000567143 KRT24Q2M2I5 525 aa8.09□□□□□ -1.11
GINS3-206ENST00000567143 L1TD1Q5T7N2 865 aaKnown RBP8.09□□□□□ -1.11
GINS3-206ENST00000567143 NOL8Q76FK4 1167 aaKnown RBP8.09□□□□□ -1.11
GINS3-206ENST00000567143 PHACTR3Q96KR7 559 aa8.09□□□□□ -1.11
GINS3-206ENST00000567143 PNNQ9H307 717 aaKnown RBP8.09□□□□□ -1.11
GINS3-206ENST00000567143 CAMTA1Q9Y6Y1 1673 aa8.09□□□□□ -1.11
GINS3-206ENST00000567143 SPATA31A3Q5VYP0 1347 aa8.09□□□□□ -1.11
GINS3-206ENST00000567143 FYB1O15117 783 aa8.09□□□□□ -1.11
GINS3-206ENST00000567143 DIAPH1O60610 1272 aaKnown RBP8.09□□□□□ -1.11
GINS3-206ENST00000567143 CPDO75976 1380 aa8.09□□□□□ -1.11
GINS3-206ENST00000567143 NFAT5O94916 1531 aa8.08□□□□□ -1.12
GINS3-206ENST00000567143 EMILIN1Q9Y6C2 1016 aa8.08□□□□□ -1.12
GINS3-206ENST00000567143 RRS1Q15050 365 aaKnown RBP8.08□□□□□ -1.12
GINS3-206ENST00000567143 TNPO1Q92973 898 aaKnown RBP8.08□□□□□ -1.12
GINS3-206ENST00000567143 SLIT2O94813 1529 aa8.08□□□□□ -1.12
GINS3-206ENST00000567143 C16orf71Q8IYS4 520 aaPredicted RBP8.08□□□□□ -1.12
GINS3-206ENST00000567143 CCDC61Q9Y6R9 512 aa8.08□□□□□ -1.12
GINS3-206ENST00000567143 KIF20BQ96Q89 1820 aa8.08□□□□□ -1.12
GINS3-206ENST00000567143 NPC1L1Q9UHC9 1359 aa8.08□□□□□ -1.12
GINS3-206ENST00000567143 RGPD3A6NKT7 1758 aaPredicted RBP8.07□□□□□ -1.12
GINS3-206ENST00000567143 RGPD4Q7Z3J3 1758 aa8.07□□□□□ -1.12
GINS3-206ENST00000567143 HSPA1LP34931 641 aa8.07□□□□□ -1.12
GINS3-206ENST00000567143 CHD1LQ86WJ1 897 aa8.07□□□□□ -1.12
GINS3-206ENST00000567143 LRRC59Q96AG4 307 aaKnown RBP8.07□□□□□ -1.12
GINS3-206ENST00000567143 EDC4Q6P2E9 1401 aaKnown RBP8.07□□□□□ -1.12
GINS3-206ENST00000567143 PPIP5K1Q6PFW1 1433 aa8.07□□□□□ -1.12
GINS3-206ENST00000567143 SSFA2P28290 1259 aa8.07□□□□□ -1.12
GINS3-206ENST00000567143 GAS2L3Q86XJ1 694 aa8.07□□□□□ -1.12
GINS3-206ENST00000567143 TRIM44Q96DX7 344 aaPredicted RBP8.07□□□□□ -1.12
GINS3-206ENST00000567143 A0A1W2PP64 1363 aa8.07□□□□□ -1.12
GINS3-206ENST00000567143 SMARCA5O60264 1052 aaPredicted RBP8.07□□□□□ -1.12
GINS3-206ENST00000567143 TTC21AQ8NDW8 1320 aa8.07□□□□□ -1.12
GINS3-206ENST00000567143 ZNF692Q9BU19 519 aaPredicted RBP8.07□□□□□ -1.12
GINS3-206ENST00000567143 CDK19Q9BWU1 502 aa8.07□□□□□ -1.12
GINS3-206ENST00000567143 ZBTB40Q9NUA8 1239 aa8.07□□□□□ -1.12
GINS3-206ENST00000567143 TSHZ3Q63HK5 1081 aa8.06□□□□□ -1.12
GINS3-206ENST00000567143 OTUD7AQ8TE49 926 aaPredicted RBP8.06□□□□□ -1.12
GINS3-206ENST00000567143 MIS18AQ9NYP9 233 aa8.06□□□□□ -1.12
GINS3-206ENST00000567143 PHF8Q9UPP1 1060 aa8.06□□□□□ -1.12
GINS3-206ENST00000567143 ANKRD36BQ8N2N9 1353 aa8.06□□□□□ -1.12
GINS3-206ENST00000567143 IPO8O15397 1037 aaKnown RBP8.06□□□□□ -1.12
GINS3-206ENST00000567143 DTNBO60941 627 aa8.06□□□□□ -1.12
GINS3-206ENST00000567143 PSME1Q06323 249 aa8.06□□□□□ -1.12
GINS3-206ENST00000567143 MPNDQ8N594 471 aa8.06□□□□□ -1.12
GINS3-206ENST00000567143 NGEFQ8N5V2 710 aa8.06□□□□□ -1.12
GINS3-206ENST00000567143 NECTIN2Q92692 538 aa8.06□□□□□ -1.12
GINS3-206ENST00000567143 NUDT16Q96DE0 195 aaKnown RBP8.06□□□□□ -1.12
GINS3-206ENST00000567143 GRPEL1Q9HAV7 217 aa8.06□□□□□ -1.12
GINS3-206ENST00000567143 OVOS2A0A0J9YW53 1432 aa8.05□□□□□ -1.12
GINS3-206ENST00000567143 OVOS2Q6IE36 1432 aa8.05□□□□□ -1.12
GINS3-206ENST00000567143 TBC1D9Q6ZT07 1266 aa8.05□□□□□ -1.12
GINS3-206ENST00000567143 PHF23Q9BUL5 403 aaPredicted RBP8.05□□□□□ -1.12
GINS3-206ENST00000567143 RSPH6AQ9H0K4 717 aa8.05□□□□□ -1.12
GINS3-206ENST00000567143 TERF2IPQ9NYB0 399 aa8.05□□□□□ -1.12
GINS3-206ENST00000567143 SLC4A10Q6U841 1118 aa8.05□□□□□ -1.12
GINS3-206ENST00000567143 PLEKHF1Q96S99 279 aa8.05□□□□□ -1.12
GINS3-206ENST00000567143 THSD7AQ9UPZ6 1657 aa8.05□□□□□ -1.12
GINS3-206ENST00000567143 KIF24Q5T7B8 1368 aa8.05□□□□□ -1.12
GINS3-206ENST00000567143 PKP1Q13835 747 aa8.05□□□□□ -1.12
GINS3-206ENST00000567143 HDGFL2Q7Z4V5 671 aaPredicted RBP8.05□□□□□ -1.12
GINS3-206ENST00000567143 NME9Q86XW9 330 aa8.05□□□□□ -1.12
GINS3-206ENST00000567143 GAS2L2Q8NHY3 880 aa8.05□□□□□ -1.12
GINS3-206ENST00000567143 ATRNO75882 1429 aa8.04□□□□□ -1.12
GINS3-206ENST00000567143 SMC5Q8IY18 1101 aa8.04□□□□□ -1.12
GINS3-206ENST00000567143 C8orf58Q8NAV2 365 aa8.04□□□□□ -1.12
GINS3-206ENST00000567143 ZNF428Q96B54 188 aa8.04□□□□□ -1.12
GINS3-206ENST00000567143 DDX49Q9Y6V7 483 aaKnown RBP8.04□□□□□ -1.12
GINS3-206ENST00000567143 ERBB4Q15303 1308 aa8.04□□□□□ -1.12
GINS3-206ENST00000567143 NUCB1Q02818 461 aa8.04□□□□□ -1.12
GINS3-206ENST00000567143 HDAC1Q13547 482 aaPredicted RBP8.03□□□□□ -1.12
GINS3-206ENST00000567143 MCTP1Q6DN14 999 aa8.03□□□□□ -1.12
GINS3-206ENST00000567143 ORAI2Q96SN7 254 aa8.03□□□□□ -1.12
GINS3-206ENST00000567143 NCAPD2Q15021 1401 aa8.03□□□□□ -1.12
GINS3-206ENST00000567143 SIRT2Q8IXJ6 389 aa8.03□□□□□ -1.12
GINS3-206ENST00000567143 FNBP4Q8N3X1 1017 aaPredicted RBP8.03□□□□□ -1.12
GINS3-206ENST00000567143 KIF16BQ96L93 1317 aa8.03□□□□□ -1.12
GINS3-206ENST00000567143 CCDC27Q2M243 656 aa8.03□□□□□ -1.12
GINS3-206ENST00000567143 TWISTNBQ3B726 338 aaPredicted RBP8.03□□□□□ -1.12
GINS3-206ENST00000567143 MBIPQ9NS73 344 aa8.03□□□□□ -1.12
GINS3-206ENST00000567143 NSD2O96028 1365 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms