RNA–Protein interactions for RNA: ENST00000566219.1

EDC3-210, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-210ENST00000566219 A0A1W2PP64 1363 aa22.4■■□□□ 1.18
EDC3-210ENST00000566219 NSD2O96028 1365 aa22.39■■□□□ 1.18
EDC3-210ENST00000566219 ANKRD36BQ8N2N9 1353 aa22.39■■□□□ 1.18
EDC3-210ENST00000566219 CEP350Q5VT06 3117 aa22.39■■□□□ 1.17
EDC3-210ENST00000566219 NEUROD1Q13562 356 aa22.38■■□□□ 1.17
EDC3-210ENST00000566219 SLC12A5Q9H2X9 1139 aa22.38■■□□□ 1.17
EDC3-210ENST00000566219 PRIM1P49642 420 aaKnown RBP22.37■■□□□ 1.17
EDC3-210ENST00000566219 MEGF6O75095 1541 aa22.36■■□□□ 1.17
EDC3-210ENST00000566219 YBX3P16989 372 aaKnown RBP eCLIP22.36■■□□□ 1.17
EDC3-210ENST00000566219 IP6K1Q92551 441 aa22.36■■□□□ 1.17
EDC3-210ENST00000566219 MSH5O43196 834 aa22.34■■□□□ 1.17
EDC3-210ENST00000566219 CCNL1Q9UK58 526 aaPredicted RBP22.34■■□□□ 1.17
EDC3-210ENST00000566219 C5P01031 1676 aa22.33■■□□□ 1.17
EDC3-210ENST00000566219 TERF2IPQ9NYB0 399 aa22.33■■□□□ 1.17
EDC3-210ENST00000566219 IFFO2Q5TF58 517 aa22.32■■□□□ 1.16
EDC3-210ENST00000566219 MSL1Q68DK7 614 aa22.32■■□□□ 1.16
EDC3-210ENST00000566219 CARD11Q9BXL7 1154 aa22.32■■□□□ 1.16
EDC3-210ENST00000566219 ATP10DQ9P241 1426 aa22.31■■□□□ 1.16
EDC3-210ENST00000566219 MAP3K19Q56UN5 1328 aa22.31■■□□□ 1.16
EDC3-210ENST00000566219 GRIN3BO60391 1043 aa22.3■■□□□ 1.16
EDC3-210ENST00000566219 COL23A1Q86Y22 540 aaPredicted RBP22.3■■□□□ 1.16
EDC3-210ENST00000566219 USP47Q96K76 1375 aa22.29■■□□□ 1.16
EDC3-210ENST00000566219 HOXC9P31274 260 aa22.29■■□□□ 1.16
EDC3-210ENST00000566219 ZCRB1Q8TBF4 217 aaKnown RBP22.29■■□□□ 1.16
EDC3-210ENST00000566219 TAF1LQ8IZX4 1826 aa22.27■■□□□ 1.16
EDC3-210ENST00000566219 AMPHP49418 695 aa22.27■■□□□ 1.16
EDC3-210ENST00000566219 FBLN1P23142 703 aa22.26■■□□□ 1.15
EDC3-210ENST00000566219 COG3Q96JB2 828 aa22.26■■□□□ 1.15
EDC3-210ENST00000566219 RTL1A6NKG5 1358 aa22.24■■□□□ 1.15
EDC3-210ENST00000566219 USHBP1Q8N6Y0 703 aa22.23■■□□□ 1.15
EDC3-210ENST00000566219 TOGARAM1Q9Y4F4 1720 aa22.23■■□□□ 1.15
EDC3-210ENST00000566219 C4BP0C0L5 1744 aa22.21■■□□□ 1.15
EDC3-210ENST00000566219 GPBP1L1Q9HC44 474 aaPredicted RBP22.21■■□□□ 1.15
EDC3-210ENST00000566219 ADCY9O60503 1353 aa22.21■■□□□ 1.15
EDC3-210ENST00000566219 RRS1Q15050 365 aaKnown RBP22.2■■□□□ 1.14
EDC3-210ENST00000566219 NBPF6Q5VWK0 638 aa22.2■■□□□ 1.14
EDC3-210ENST00000566219 ZNF526Q8TF50 670 aaPredicted RBP22.2■■□□□ 1.14
EDC3-210ENST00000566219 NBPF4Q96M43 638 aa22.2■■□□□ 1.14
EDC3-210ENST00000566219 PALLDQ8WX93 1383 aa22.2■■□□□ 1.14
EDC3-210ENST00000566219 SMG6Q86US8 1419 aaKnown RBP22.2■■□□□ 1.14
EDC3-210ENST00000566219 PUS7Q96PZ0 661 aaKnown RBP22.19■■□□□ 1.14
EDC3-210ENST00000566219 CD2APQ9Y5K6 639 aa22.19■■□□□ 1.14
EDC3-210ENST00000566219 ITGB4P16144 1822 aa22.18■■□□□ 1.14
EDC3-210ENST00000566219 RAPGEF4Q8WZA2 1011 aa22.18■■□□□ 1.14
EDC3-210ENST00000566219 UBR3Q6ZT12 1888 aa22.17■■□□□ 1.14
EDC3-210ENST00000566219 CGNL1Q0VF96 1302 aa22.17■■□□□ 1.14
EDC3-210ENST00000566219 WWC3Q9ULE0 1092 aa22.17■■□□□ 1.14
EDC3-210ENST00000566219 PCDH11XQ9BZA7 1347 aa22.16■■□□□ 1.14
EDC3-210ENST00000566219 PCDH11YQ9BZA8 1340 aa22.16■■□□□ 1.14
EDC3-210ENST00000566219 KIF20BQ96Q89 1820 aa22.15■■□□□ 1.14
EDC3-210ENST00000566219 TATP17735 454 aaPredicted RBP22.15■■□□□ 1.14
EDC3-210ENST00000566219 FLAD1Q8NFF5 587 aa22.15■■□□□ 1.14
EDC3-210ENST00000566219 HSPA6P17066 643 aa22.14■■□□□ 1.13
EDC3-210ENST00000566219 PKD1L3Q7Z443 1732 aa22.14■■□□□ 1.13
EDC3-210ENST00000566219 IGSF1Q8N6C5 1336 aa22.13■■□□□ 1.13
EDC3-210ENST00000566219 MPRIPQ6WCQ1 1025 aa22.13■■□□□ 1.13
EDC3-210ENST00000566219 AMIGO3Q86WK7 504 aa22.13■■□□□ 1.13
EDC3-210ENST00000566219 AK7Q96M32 723 aa22.13■■□□□ 1.13
EDC3-210ENST00000566219 TESK2Q96S53 571 aa22.13■■□□□ 1.13
EDC3-210ENST00000566219 TONSLQ96HA7 1378 aa22.12■■□□□ 1.13
EDC3-210ENST00000566219 PHF14O94880 888 aa22.12■■□□□ 1.13
EDC3-210ENST00000566219 GGNBP2Q9H3C7 697 aa22.12■■□□□ 1.13
EDC3-210ENST00000566219 CLSPNQ9HAW4 1339 aa22.11■■□□□ 1.13
EDC3-210ENST00000566219 SMIM5Q71RC9 77 aa22.11■■□□□ 1.13
EDC3-210ENST00000566219 ST20-MTHFSA0A0A6YYL1 179 aa22.1■■□□□ 1.13
EDC3-210ENST00000566219 NSD3Q9BZ95 1437 aa22.09■■□□□ 1.13
EDC3-210ENST00000566219 MAP2P11137 1827 aaKnown RBP22.09■■□□□ 1.13
EDC3-210ENST00000566219 INSRP06213 1382 aa22.09■■□□□ 1.13
EDC3-210ENST00000566219 CYP27B1O15528 508 aa22.08■■□□□ 1.13
EDC3-210ENST00000566219 HSP90AB2PQ58FF8 381 aa22.08■■□□□ 1.13
EDC3-210ENST00000566219 CICQ96RK0 1608 aaPredicted RBP22.08■■□□□ 1.13
EDC3-210ENST00000566219 FLT4P35916 1363 aa22.08■■□□□ 1.12
EDC3-210ENST00000566219 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.07■■□□□ 1.12
EDC3-210ENST00000566219 FYB1O15117 783 aa22.07■■□□□ 1.12
EDC3-210ENST00000566219 HMGB2P26583 209 aaKnown RBP22.07■■□□□ 1.12
EDC3-210ENST00000566219 SMARCC1Q92922 1105 aaPredicted RBP22.06■■□□□ 1.12
EDC3-210ENST00000566219 KIAA1551Q9HCM1 1747 aa22.03■■□□□ 1.12
EDC3-210ENST00000566219 SSFA2P28290 1259 aa22.03■■□□□ 1.12
EDC3-210ENST00000566219 LINC00116Q8NCU8 138 aa22.03■■□□□ 1.12
EDC3-210ENST00000566219 KIF3CO14782 793 aa22.02■■□□□ 1.12
EDC3-210ENST00000566219 CCER1Q8TC90 406 aaPredicted RBP22.02■■□□□ 1.12
EDC3-210ENST00000566219 PIGBQ92521 554 aa22.02■■□□□ 1.12
EDC3-210ENST00000566219 N4BP2Q86UW6 1770 aaPredicted RBP22.02■■□□□ 1.11
EDC3-210ENST00000566219 KIF13BQ9NQT8 1826 aa22.01■■□□□ 1.11
EDC3-210ENST00000566219 KIF24Q5T7B8 1368 aa22.01■■□□□ 1.11
EDC3-210ENST00000566219 ANKRD26Q9UPS8 1709 aa22■■□□□ 1.11
EDC3-210ENST00000566219 NCAPD2Q15021 1401 aa22■■□□□ 1.11
EDC3-210ENST00000566219 LOC102724428A0A0B4J2F2 783 aa22■■□□□ 1.11
EDC3-210ENST00000566219 SIK1P57059 783 aa22■■□□□ 1.11
EDC3-210ENST00000566219 PXDNLA1KZ92 1463 aa22■■□□□ 1.11
EDC3-210ENST00000566219 GNPATO15228 680 aa21.99■■□□□ 1.11
EDC3-210ENST00000566219 EMILIN1Q9Y6C2 1016 aa21.99■■□□□ 1.11
EDC3-210ENST00000566219 SLC24A1O60721 1099 aa21.97■■□□□ 1.11
EDC3-210ENST00000566219 ITPK1Q13572 414 aa21.97■■□□□ 1.11
EDC3-210ENST00000566219 MMP10P09238 476 aa21.96■■□□□ 1.11
EDC3-210ENST00000566219 TMF1P82094 1093 aa21.96■■□□□ 1.11
EDC3-210ENST00000566219 NKX1-1Q15270 411 aaPredicted RBP21.96■■□□□ 1.11
EDC3-210ENST00000566219 TMOD3Q9NYL9 352 aa21.96■■□□□ 1.11
EDC3-210ENST00000566219 ASAP1Q9ULH1 1129 aa21.95■■□□□ 1.1
EDC3-210ENST00000566219 SPG7Q9UQ90 795 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms