RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 FAM98CQ17RN3 349 aaKnown RBP9.29□□□□□ -0.92
UBFD1-204ENST00000565634 ABCC5O15440 1437 aa9.29□□□□□ -0.92
UBFD1-204ENST00000565634 XRN1Q8IZH2 1706 aaKnown RBP9.28□□□□□ -0.92
UBFD1-204ENST00000565634 PIK3R4Q99570 1358 aa9.28□□□□□ -0.92
UBFD1-204ENST00000565634 PTPN23Q9H3S7 1636 aa9.28□□□□□ -0.92
UBFD1-204ENST00000565634 TSR1Q2NL82 804 aaKnown RBP9.28□□□□□ -0.92
UBFD1-204ENST00000565634 CHD4Q14839 1912 aa9.28□□□□□ -0.92
UBFD1-204ENST00000565634 DCCP43146 1447 aa9.28□□□□□ -0.92
UBFD1-204ENST00000565634 UNC13BO14795 1591 aa9.28□□□□□ -0.92
UBFD1-204ENST00000565634 MYOM2P54296 1465 aa9.28□□□□□ -0.92
UBFD1-204ENST00000565634 COL22A1Q8NFW1 1626 aaPredicted RBP9.27□□□□□ -0.92
UBFD1-204ENST00000565634 NRXN3Q9Y4C0 1643 aa9.27□□□□□ -0.92
UBFD1-204ENST00000565634 TRIM37O94972 964 aa9.27□□□□□ -0.93
UBFD1-204ENST00000565634 PRIM1P49642 420 aaKnown RBP9.27□□□□□ -0.93
UBFD1-204ENST00000565634 NBR1Q14596 966 aa9.27□□□□□ -0.93
UBFD1-204ENST00000565634 ZNF326Q5BKZ1 582 aaKnown RBP9.27□□□□□ -0.93
UBFD1-204ENST00000565634 ERBINQ96RT1 1412 aa9.27□□□□□ -0.93
UBFD1-204ENST00000565634 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.26□□□□□ -0.93
UBFD1-204ENST00000565634 WBP1LQ9NX94 342 aa9.26□□□□□ -0.93
UBFD1-204ENST00000565634 TSKSQ9UJT2 592 aa9.26□□□□□ -0.93
UBFD1-204ENST00000565634 LMTK2Q8IWU2 1503 aa9.26□□□□□ -0.93
UBFD1-204ENST00000565634 RRBP1Q9P2E9 1410 aaKnown RBP9.25□□□□□ -0.93
UBFD1-204ENST00000565634 SPDYE16A6NNV3 312 aaPredicted RBP9.25□□□□□ -0.93
UBFD1-204ENST00000565634 RGS20O76081 388 aa9.25□□□□□ -0.93
UBFD1-204ENST00000565634 ITGBL1O95965 494 aaPredicted RBP9.25□□□□□ -0.93
UBFD1-204ENST00000565634 VPS72Q15906 364 aa9.25□□□□□ -0.93
UBFD1-204ENST00000565634 CAMKK2Q96RR4 588 aa9.25□□□□□ -0.93
UBFD1-204ENST00000565634 CROCC2H7BZ55 1655 aa9.25□□□□□ -0.93
UBFD1-204ENST00000565634 SLIT2O94813 1529 aa9.25□□□□□ -0.93
UBFD1-204ENST00000565634 FAM83GA6ND36 823 aa9.24□□□□□ -0.93
UBFD1-204ENST00000565634 MAP3K7O43318 606 aa9.24□□□□□ -0.93
UBFD1-204ENST00000565634 APBA3O96018 575 aa9.24□□□□□ -0.93
UBFD1-204ENST00000565634 E2F4Q16254 413 aa9.24□□□□□ -0.93
UBFD1-204ENST00000565634 LMOD2Q6P5Q4 547 aa9.24□□□□□ -0.93
UBFD1-204ENST00000565634 RGPD1P0DJD0 1748 aa9.24□□□□□ -0.93
UBFD1-204ENST00000565634 SPHKAPQ2M3C7 1700 aa9.24□□□□□ -0.93
UBFD1-204ENST00000565634 RGPD8O14715 1765 aaPredicted RBP9.24□□□□□ -0.93
UBFD1-204ENST00000565634 LAMC1P11047 1609 aa9.23□□□□□ -0.93
UBFD1-204ENST00000565634 PDGFDQ9GZP0 370 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-204ENST00000565634 ARIH1Q9Y4X5 557 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-204ENST00000565634 E9PCH4 1651 aa9.23□□□□□ -0.93
UBFD1-204ENST00000565634 TNS1Q9HBL0 1735 aaKnown RBP9.22□□□□□ -0.93
UBFD1-204ENST00000565634 KCNQ2O43526 872 aa9.22□□□□□ -0.93
UBFD1-204ENST00000565634 SPON1Q9HCB6 807 aa9.22□□□□□ -0.93
UBFD1-204ENST00000565634 FAM198AQ9UFP1 575 aa9.22□□□□□ -0.93
UBFD1-204ENST00000565634 TIMELESSQ9UNS1 1208 aa9.22□□□□□ -0.93
UBFD1-204ENST00000565634 PLCH1Q4KWH8 1693 aa9.22□□□□□ -0.93
UBFD1-204ENST00000565634 ROBO2Q9HCK4 1378 aa9.22□□□□□ -0.93
UBFD1-204ENST00000565634 DAPK1P53355 1430 aa9.22□□□□□ -0.93
UBFD1-204ENST00000565634 PXDNQ92626 1479 aa9.21□□□□□ -0.93
UBFD1-204ENST00000565634 C3orf80F5H4A9 247 aa9.21□□□□□ -0.94
UBFD1-204ENST00000565634 KRT28Q7Z3Y7 464 aa9.21□□□□□ -0.94
UBFD1-204ENST00000565634 PCGF6Q9BYE7 350 aa9.21□□□□□ -0.94
UBFD1-204ENST00000565634 NPHP3Q7Z494 1330 aa9.21□□□□□ -0.94
UBFD1-204ENST00000565634 TRIM26Q12899 539 aaPredicted RBP9.2□□□□□ -0.94
UBFD1-204ENST00000565634 NYAP1Q6ZVC0 841 aa9.2□□□□□ -0.94
UBFD1-204ENST00000565634 PACS2Q86VP3 889 aa9.2□□□□□ -0.94
UBFD1-204ENST00000565634 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.2□□□□□ -0.94
UBFD1-204ENST00000565634 ANKRD30AQ9BXX3 1397 aa9.2□□□□□ -0.94
UBFD1-204ENST00000565634 CEP350Q5VT06 3117 aa9.19□□□□□ -0.94
UBFD1-204ENST00000565634 GRXCR2A6NFK2 248 aa9.19□□□□□ -0.94
UBFD1-204ENST00000565634 WAPLQ7Z5K2 1190 aa9.19□□□□□ -0.94
UBFD1-204ENST00000565634 CDCA7LQ96GN5 454 aa9.19□□□□□ -0.94
UBFD1-204ENST00000565634 BTG4Q9NY30 223 aa9.19□□□□□ -0.94
UBFD1-204ENST00000565634 TSR3Q9UJK0 312 aaKnown RBP9.19□□□□□ -0.94
UBFD1-204ENST00000565634 SPATA31A3Q5VYP0 1347 aa9.19□□□□□ -0.94
UBFD1-204ENST00000565634 SMAPO00193 183 aa9.18□□□□□ -0.94
UBFD1-204ENST00000565634 ZBTB7AO95365 584 aa9.18□□□□□ -0.94
UBFD1-204ENST00000565634 PRSS12P56730 875 aa9.18□□□□□ -0.94
UBFD1-204ENST00000565634 NBPF8Q3BBV2 869 aa9.18□□□□□ -0.94
UBFD1-204ENST00000565634 NBPF14Q5TI25 921 aa9.18□□□□□ -0.94
UBFD1-204ENST00000565634 USP32Q8NFA0 1604 aa9.18□□□□□ -0.94
UBFD1-204ENST00000565634 LRCH3Q96II8 777 aa9.18□□□□□ -0.94
UBFD1-204ENST00000565634 STK26Q9P289 416 aa9.18□□□□□ -0.94
UBFD1-204ENST00000565634 HPS5Q9UPZ3 1129 aa9.18□□□□□ -0.94
UBFD1-204ENST00000565634 UTRNP46939 3433 aa9.18□□□□□ -0.94
UBFD1-204ENST00000565634 NUP188Q5SRE5 1749 aa9.17□□□□□ -0.94
UBFD1-204ENST00000565634 OSBPP22059 807 aa9.17□□□□□ -0.94
UBFD1-204ENST00000565634 WDR70Q9NW82 654 aa9.17□□□□□ -0.94
UBFD1-204ENST00000565634 RPRD2Q5VT52 1461 aaKnown RBP9.16□□□□□ -0.94
UBFD1-204ENST00000565634 TULP1O00294 542 aaPredicted RBP9.16□□□□□ -0.94
UBFD1-204ENST00000565634 USP35Q9P2H5 1018 aa9.16□□□□□ -0.94
UBFD1-204ENST00000565634 NWD2Q9ULI1 1742 aa9.15□□□□□ -0.94
UBFD1-204ENST00000565634 KCNC4Q03721 635 aa9.15□□□□□ -0.94
UBFD1-204ENST00000565634 IRX2Q9BZI1 471 aaPredicted RBP9.15□□□□□ -0.94
UBFD1-204ENST00000565634 CDHR5Q9HBB8 845 aa9.15□□□□□ -0.94
UBFD1-204ENST00000565634 KAT6BQ8WYB5 2073 aa9.14□□□□□ -0.95
UBFD1-204ENST00000565634 GIGYF1O75420 1035 aaPredicted RBP9.14□□□□□ -0.95
UBFD1-204ENST00000565634 FHDC1Q9C0D6 1143 aaPredicted RBP9.14□□□□□ -0.95
UBFD1-204ENST00000565634 ADGRL2O95490 1459 aa9.14□□□□□ -0.95
UBFD1-204ENST00000565634 ANKRD50Q9ULJ7 1429 aa9.14□□□□□ -0.95
UBFD1-204ENST00000565634 RREB1Q92766 1687 aa9.13□□□□□ -0.95
UBFD1-204ENST00000565634 NINLQ9Y2I6 1382 aa9.13□□□□□ -0.95
UBFD1-204ENST00000565634 NRKQ7Z2Y5 1582 aa9.13□□□□□ -0.95
UBFD1-204ENST00000565634 FAM196AQ6ZSG2 479 aa9.13□□□□□ -0.95
UBFD1-204ENST00000565634 SAMD7Q7Z3H4 446 aa9.13□□□□□ -0.95
UBFD1-204ENST00000565634 TATDN2Q93075 761 aa9.13□□□□□ -0.95
UBFD1-204ENST00000565634 SYT17Q9BSW7 474 aa9.13□□□□□ -0.95
UBFD1-204ENST00000565634 STRN4Q9NRL3 753 aa9.13□□□□□ -0.95
UBFD1-204ENST00000565634 NRAPQ86VF7 1730 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms