RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 FLT4P35916 1363 aa24.98■■□□□ 1.59
MSLN-205ENST00000563941 NGDNQ8NEJ9 315 aaKnown RBP24.97■■□□□ 1.59
MSLN-205ENST00000563941 PLPPR3Q6T4P5 718 aa24.96■■□□□ 1.59
MSLN-205ENST00000563941 PIK3C2AO00443 1686 aa24.96■■□□□ 1.59
MSLN-205ENST00000563941 FER1L4A9Z1Z3 1794 aa24.95■■□□□ 1.59
MSLN-205ENST00000563941 DCTPP1Q9H773 170 aa24.95■■□□□ 1.59
MSLN-205ENST00000563941 PTPRCP08575 1304 aa24.95■■□□□ 1.59
MSLN-205ENST00000563941 TBC1D9Q6ZT07 1266 aa24.95■■□□□ 1.58
MSLN-205ENST00000563941 CHMP5Q9NZZ3 219 aa24.95■■□□□ 1.58
MSLN-205ENST00000563941 ATP10DQ9P241 1426 aa24.95■■□□□ 1.58
MSLN-205ENST00000563941 MTHFSDQ2M296 383 aaKnown RBP24.94■■□□□ 1.58
MSLN-205ENST00000563941 KDRP35968 1356 aa24.94■■□□□ 1.58
MSLN-205ENST00000563941 MSH6P52701 1360 aa24.94■■□□□ 1.58
MSLN-205ENST00000563941 FOXO3O43524 673 aa24.94■■□□□ 1.58
MSLN-205ENST00000563941 SNX21Q969T3 373 aa24.94■■□□□ 1.58
MSLN-205ENST00000563941 XRN1Q8IZH2 1706 aaKnown RBP24.93■■□□□ 1.58
MSLN-205ENST00000563941 ANKRD44Q8N8A2 993 aa24.93■■□□□ 1.58
MSLN-205ENST00000563941 AMPHP49418 695 aa24.92■■□□□ 1.58
MSLN-205ENST00000563941 RTF1Q92541 710 aaKnown RBP24.92■■□□□ 1.58
MSLN-205ENST00000563941 BRPF3Q9ULD4 1205 aa24.92■■□□□ 1.58
MSLN-205ENST00000563941 CEP170BQ9Y4F5 1589 aaPredicted RBP24.92■■□□□ 1.58
MSLN-205ENST00000563941 NCOA3Q9Y6Q9 1424 aa24.91■■□□□ 1.58
MSLN-205ENST00000563941 THEMISQ8N1K5 641 aaPredicted RBP24.91■■□□□ 1.58
MSLN-205ENST00000563941 MIS18AQ9NYP9 233 aa24.91■■□□□ 1.58
MSLN-205ENST00000563941 IGSF1Q8N6C5 1336 aa24.91■■□□□ 1.58
MSLN-205ENST00000563941 PLEKHM2Q8IWE5 1019 aa24.91■■□□□ 1.58
MSLN-205ENST00000563941 RPAP2Q8IXW5 612 aaPredicted RBP24.9■■□□□ 1.58
MSLN-205ENST00000563941 EYA1Q99502 592 aa24.9■■□□□ 1.58
MSLN-205ENST00000563941 RTL1A6NKG5 1358 aa24.9■■□□□ 1.58
MSLN-205ENST00000563941 CDC45O75419 566 aa24.89■■□□□ 1.58
MSLN-205ENST00000563941 SLC4A2P04920 1241 aa24.89■■□□□ 1.58
MSLN-205ENST00000563941 GSPT1P15170 499 aaKnown RBP24.89■■□□□ 1.58
MSLN-205ENST00000563941 CEP85Q6P2H3 762 aa24.89■■□□□ 1.58
MSLN-205ENST00000563941 TSPYL4Q9UJ04 414 aa24.89■■□□□ 1.58
MSLN-205ENST00000563941 KIF2CQ99661 725 aa24.89■■□□□ 1.57
MSLN-205ENST00000563941 ANKARQ7Z5J8 1434 aa24.88■■□□□ 1.57
MSLN-205ENST00000563941 MCM4P33991 863 aa24.88■■□□□ 1.57
MSLN-205ENST00000563941 GAS2L2Q8NHY3 880 aa24.88■■□□□ 1.57
MSLN-205ENST00000563941 MEIS3Q99687 375 aa24.87■■□□□ 1.57
MSLN-205ENST00000563941 MARF1Q9Y4F3 1742 aaKnown RBP24.86■■□□□ 1.57
MSLN-205ENST00000563941 NLRP6P59044 892 aa24.86■■□□□ 1.57
MSLN-205ENST00000563941 TTC22Q5TAA0 569 aa24.85■■□□□ 1.57
MSLN-205ENST00000563941 LRRC37A3O60309 1634 aa24.85■■□□□ 1.57
MSLN-205ENST00000563941 DDIT3P35638 169 aa24.84■■□□□ 1.57
MSLN-205ENST00000563941 C16orf71Q8IYS4 520 aaPredicted RBP24.84■■□□□ 1.57
MSLN-205ENST00000563941 HSP90AB1P08238 724 aaKnown RBP24.83■■□□□ 1.57
MSLN-205ENST00000563941 KCNA6P17658 529 aa24.83■■□□□ 1.57
MSLN-205ENST00000563941 G2E3Q7L622 706 aa24.83■■□□□ 1.57
MSLN-205ENST00000563941 USP54Q70EL1 1684 aa24.83■■□□□ 1.56
MSLN-205ENST00000563941 HTATSF1O43719 755 aaKnown RBP24.81■■□□□ 1.56
MSLN-205ENST00000563941 HOXC9P31274 260 aa24.81■■□□□ 1.56
MSLN-205ENST00000563941 NUTM2GQ5VZR2 741 aa24.8■■□□□ 1.56
MSLN-205ENST00000563941 EIF5BO60841 1220 aaKnown RBP24.8■■□□□ 1.56
MSLN-205ENST00000563941 CCT4P50991 539 aaKnown RBP24.8■■□□□ 1.56
MSLN-205ENST00000563941 OTUD7AQ8TE49 926 aaPredicted RBP24.8■■□□□ 1.56
MSLN-205ENST00000563941 RTN4Q9NQC3 1192 aaKnown RBP24.8■■□□□ 1.56
MSLN-205ENST00000563941 NWD1Q149M9 1564 aa24.8■■□□□ 1.56
MSLN-205ENST00000563941 F6X3S4 739 aa24.79■■□□□ 1.56
MSLN-205ENST00000563941 SLC4A10Q6U841 1118 aa24.79■■□□□ 1.56
MSLN-205ENST00000563941 CD2BP2O95400 341 aaKnown RBP24.79■■□□□ 1.56
MSLN-205ENST00000563941 FAM208AQ9UK61 1670 aaKnown RBP24.79■■□□□ 1.56
MSLN-205ENST00000563941 GNAT3A8MTJ3 354 aa24.78■■□□□ 1.56
MSLN-205ENST00000563941 SMARCA5O60264 1052 aaPredicted RBP24.78■■□□□ 1.56
MSLN-205ENST00000563941 APBB1O00213 710 aa24.77■■□□□ 1.56
MSLN-205ENST00000563941 STK31Q9BXU1 1019 aa24.77■■□□□ 1.56
MSLN-205ENST00000563941 HMMRO75330 724 aa24.77■■□□□ 1.56
MSLN-205ENST00000563941 RBM42Q9BTD8 480 aaKnown RBP24.77■■□□□ 1.56
MSLN-205ENST00000563941 CIZ1Q9ULV3 898 aaPredicted RBP24.77■■□□□ 1.56
MSLN-205ENST00000563941 K7ELQ4 463 aaPredicted RBP24.76■■□□□ 1.55
MSLN-205ENST00000563941 ABTB2Q8N961 1025 aa24.76■■□□□ 1.55
MSLN-205ENST00000563941 MAP3K5Q99683 1374 aa24.74■■□□□ 1.55
MSLN-205ENST00000563941 DDX11L8A8MPP1 907 aa24.74■■□□□ 1.55
MSLN-205ENST00000563941 SDSP20132 328 aa24.73■■□□□ 1.55
MSLN-205ENST00000563941 L1TD1Q5T7N2 865 aaKnown RBP24.73■■□□□ 1.55
MSLN-205ENST00000563941 CCDC30Q5VVM6 783 aa24.73■■□□□ 1.55
MSLN-205ENST00000563941 TRAK2O60296 914 aa24.73■■□□□ 1.55
MSLN-205ENST00000563941 HSP90AA1P07900 732 aaKnown RBP24.73■■□□□ 1.55
MSLN-205ENST00000563941 LTV1Q96GA3 475 aaPredicted RBP24.73■■□□□ 1.55
MSLN-205ENST00000563941 FLIIQ13045 1269 aa24.72■■□□□ 1.55
MSLN-205ENST00000563941 CACNA1FO60840 1977 aa24.71■■□□□ 1.55
MSLN-205ENST00000563941 LTN1O94822 1766 aa24.71■■□□□ 1.55
MSLN-205ENST00000563941 GNAI2P04899 355 aa24.71■■□□□ 1.55
MSLN-205ENST00000563941 IL17REQ8NFR9 667 aa24.71■■□□□ 1.55
MSLN-205ENST00000563941 TNPO1Q92973 898 aaKnown RBP24.71■■□□□ 1.55
MSLN-205ENST00000563941 RAB3GAP1Q15042 981 aa24.7■■□□□ 1.54
MSLN-205ENST00000563941 USP26Q9BXU7 913 aa24.7■■□□□ 1.54
MSLN-205ENST00000563941 FKBP5Q13451 457 aaPredicted RBP24.7■■□□□ 1.54
MSLN-205ENST00000563941 CASC1Q6TDU7 716 aa24.7■■□□□ 1.54
MSLN-205ENST00000563941 RABEP1Q15276 862 aa24.69■■□□□ 1.54
MSLN-205ENST00000563941 C14orf37Q86TY3 774 aa24.69■■□□□ 1.54
MSLN-205ENST00000563941 GZF1Q9H116 711 aaPredicted RBP24.69■■□□□ 1.54
MSLN-205ENST00000563941 FOXD4L1Q9NU39 408 aa24.69■■□□□ 1.54
MSLN-205ENST00000563941 SOS1Q07889 1333 aaPredicted RBP24.69■■□□□ 1.54
MSLN-205ENST00000563941 NECTIN2Q92692 538 aa24.68■■□□□ 1.54
MSLN-205ENST00000563941 N4BP2Q86UW6 1770 aaPredicted RBP24.68■■□□□ 1.54
MSLN-205ENST00000563941 TAF7Q15545 349 aaPredicted RBP24.68■■□□□ 1.54
MSLN-205ENST00000563941 BABAM1Q9NWV8 329 aa24.68■■□□□ 1.54
MSLN-205ENST00000563941 PHF8Q9UPP1 1060 aa24.68■■□□□ 1.54
MSLN-205ENST00000563941 CHD2O14647 1828 aaKnown RBP24.68■■□□□ 1.54
MSLN-205ENST00000563941 USHBP1Q8N6Y0 703 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms