RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 EVA1CP58658 441 aa9.67□□□□□ -0.86
SPG11-224ENST00000561268 SF3B2Q13435 895 aaKnown RBP9.67□□□□□ -0.86
SPG11-224ENST00000561268 FAM182BQ5T319 152 aa9.67□□□□□ -0.86
SPG11-224ENST00000561268 CAMKK2Q96RR4 588 aa9.67□□□□□ -0.86
SPG11-224ENST00000561268 MEGF6O75095 1541 aa9.66□□□□□ -0.86
SPG11-224ENST00000561268 SMG6Q86US8 1419 aaKnown RBP9.66□□□□□ -0.86
SPG11-224ENST00000561268 TMF1P82094 1093 aa9.66□□□□□ -0.86
SPG11-224ENST00000561268 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.66□□□□□ -0.86
SPG11-224ENST00000561268 USP35Q9P2H5 1018 aa9.66□□□□□ -0.86
SPG11-224ENST00000561268 C5P01031 1676 aa9.66□□□□□ -0.86
SPG11-224ENST00000561268 TOM1L2Q6ZVM7 507 aa9.65□□□□□ -0.86
SPG11-224ENST00000561268 NSD3Q9BZ95 1437 aa9.65□□□□□ -0.87
SPG11-224ENST00000561268 ZNF831Q5JPB2 1677 aa9.64□□□□□ -0.87
SPG11-224ENST00000561268 CICQ96RK0 1608 aaPredicted RBP9.64□□□□□ -0.87
SPG11-224ENST00000561268 MAP3K19Q56UN5 1328 aa9.64□□□□□ -0.87
SPG11-224ENST00000561268 TRIM37O94972 964 aa9.64□□□□□ -0.87
SPG11-224ENST00000561268 EN1Q05925 392 aaPredicted RBP9.64□□□□□ -0.87
SPG11-224ENST00000561268 PDE3BQ13370 1112 aa9.64□□□□□ -0.87
SPG11-224ENST00000561268 DDB1Q16531 1140 aa9.64□□□□□ -0.87
SPG11-224ENST00000561268 PELP1Q8IZL8 1130 aaKnown RBP9.64□□□□□ -0.87
SPG11-224ENST00000561268 SPDYE1Q8NFV5 336 aaPredicted RBP9.64□□□□□ -0.87
SPG11-224ENST00000561268 TMC1Q8TDI8 760 aa9.64□□□□□ -0.87
SPG11-224ENST00000561268 PLEKHG2Q9H7P9 1386 aa9.63□□□□□ -0.87
SPG11-224ENST00000561268 EZH2Q15910 746 aaKnown RBP9.63□□□□□ -0.87
SPG11-224ENST00000561268 CDCA8Q53HL2 280 aa9.63□□□□□ -0.87
SPG11-224ENST00000561268 MARCH10Q8NA82 808 aaPredicted RBP9.63□□□□□ -0.87
SPG11-224ENST00000561268 IP6K1Q92551 441 aa9.63□□□□□ -0.87
SPG11-224ENST00000561268 INSRP06213 1382 aa9.63□□□□□ -0.87
SPG11-224ENST00000561268 FLT4P35916 1363 aa9.63□□□□□ -0.87
SPG11-224ENST00000561268 UBR3Q6ZT12 1888 aa9.62□□□□□ -0.87
SPG11-224ENST00000561268 FYB1O15117 783 aa9.62□□□□□ -0.87
SPG11-224ENST00000561268 PLSCR1O15162 318 aa9.62□□□□□ -0.87
SPG11-224ENST00000561268 C19orf67A6NJJ6 358 aa9.61□□□□□ -0.87
SPG11-224ENST00000561268 SOX12O15370 315 aa9.61□□□□□ -0.87
SPG11-224ENST00000561268 ATXN8OSP0DMR3 200 aa9.61□□□□□ -0.87
SPG11-224ENST00000561268 HOXC9P31274 260 aa9.61□□□□□ -0.87
SPG11-224ENST00000561268 ANKRD24Q8TF21 1146 aa9.61□□□□□ -0.87
SPG11-224ENST00000561268 COG3Q96JB2 828 aa9.61□□□□□ -0.87
SPG11-224ENST00000561268 COL5A3P25940 1745 aaPredicted RBP9.61□□□□□ -0.87
SPG11-224ENST00000561268 NSD2O96028 1365 aa9.61□□□□□ -0.87
SPG11-224ENST00000561268 SCN11AQ9UI33 1791 aa9.6□□□□□ -0.87
SPG11-224ENST00000561268 ZBTB7CA1YPR0 619 aa9.6□□□□□ -0.87
SPG11-224ENST00000561268 CCER1Q8TC90 406 aaPredicted RBP9.6□□□□□ -0.87
SPG11-224ENST00000561268 CARD14Q9BXL6 1004 aa9.6□□□□□ -0.87
SPG11-224ENST00000561268 BCL11BQ9C0K0 894 aaPredicted RBP9.6□□□□□ -0.87
SPG11-224ENST00000561268 ADAMTS7Q9UKP4 1686 aa9.6□□□□□ -0.87
SPG11-224ENST00000561268 APBA3O96018 575 aa9.59□□□□□ -0.87
SPG11-224ENST00000561268 CSB-PGBD3P0DP91 1061 aa9.59□□□□□ -0.87
SPG11-224ENST00000561268 IL2RBP14784 551 aa9.59□□□□□ -0.87
SPG11-224ENST00000561268 CHD4Q14839 1912 aa9.58□□□□□ -0.88
SPG11-224ENST00000561268 PTF1AQ7RTS3 328 aa9.58□□□□□ -0.88
SPG11-224ENST00000561268 PSDA5PKW4 1024 aaPredicted RBP9.57□□□□□ -0.88
SPG11-224ENST00000561268 GABBR2O75899 941 aa9.57□□□□□ -0.88
SPG11-224ENST00000561268 GGNBP2Q9H3C7 697 aa9.57□□□□□ -0.88
SPG11-224ENST00000561268 ANO8Q9HCE9 1232 aaPredicted RBP9.57□□□□□ -0.88
SPG11-224ENST00000561268 CGNL1Q0VF96 1302 aa9.56□□□□□ -0.88
SPG11-224ENST00000561268 C4BP0C0L5 1744 aa9.56□□□□□ -0.88
SPG11-224ENST00000561268 EXOC5O00471 708 aa9.56□□□□□ -0.88
SPG11-224ENST00000561268 EIF4G2P78344 907 aaKnown RBP eCLIP9.56□□□□□ -0.88
SPG11-224ENST00000561268 R3HDM1Q15032 1099 aaKnown RBP9.56□□□□□ -0.88
SPG11-224ENST00000561268 RRS1Q15050 365 aaKnown RBP9.56□□□□□ -0.88
SPG11-224ENST00000561268 PROM2Q8N271 834 aa9.56□□□□□ -0.88
SPG11-224ENST00000561268 NLRP2Q9NX02 1062 aa9.56□□□□□ -0.88
SPG11-224ENST00000561268 SIPA1L3O60292 1781 aaPredicted RBP9.55□□□□□ -0.88
SPG11-224ENST00000561268 HSPA5P11021 654 aaKnown RBP9.55□□□□□ -0.88
SPG11-224ENST00000561268 FBLN1P23142 703 aa9.55□□□□□ -0.88
SPG11-224ENST00000561268 LHX8Q68G74 356 aa9.55□□□□□ -0.88
SPG11-224ENST00000561268 CHADLQ6NUI6 762 aa9.55□□□□□ -0.88
SPG11-224ENST00000561268 C4AP0C0L4 1744 aa9.55□□□□□ -0.88
SPG11-224ENST00000561268 MKRN4PQ13434 485 aaPredicted RBP9.54□□□□□ -0.88
SPG11-224ENST00000561268 SSUH2Q9Y2M2 353 aa9.54□□□□□ -0.88
SPG11-224ENST00000561268 UBR2Q8IWV8 1755 aa9.54□□□□□ -0.88
SPG11-224ENST00000561268 KIF13BQ9NQT8 1826 aa9.54□□□□□ -0.88
SPG11-224ENST00000561268 WASHC2AQ641Q2 1341 aa9.54□□□□□ -0.88
SPG11-224ENST00000561268 TJP1Q07157 1748 aa9.53□□□□□ -0.88
SPG11-224ENST00000561268 KCNQ2O43526 872 aa9.53□□□□□ -0.88
SPG11-224ENST00000561268 AMPHP49418 695 aa9.53□□□□□ -0.88
SPG11-224ENST00000561268 NBPF6Q5VWK0 638 aa9.53□□□□□ -0.88
SPG11-224ENST00000561268 NBPF4Q96M43 638 aa9.53□□□□□ -0.88
SPG11-224ENST00000561268 EMILIN1Q9Y6C2 1016 aa9.53□□□□□ -0.88
SPG11-224ENST00000561268 MYH14Q7Z406 1995 aaKnown RBP9.52□□□□□ -0.89
SPG11-224ENST00000561268 TXNRD1Q16881 649 aa9.52□□□□□ -0.89
SPG11-224ENST00000561268 HSP90AB2PQ58FF8 381 aa9.52□□□□□ -0.89
SPG11-224ENST00000561268 COL3A1P02461 1466 aaPredicted RBP9.52□□□□□ -0.89
SPG11-224ENST00000561268 MRC1P22897 1456 aa9.52□□□□□ -0.89
SPG11-224ENST00000561268 KDRP35968 1356 aa9.51□□□□□ -0.89
SPG11-224ENST00000561268 KIAA1551Q9HCM1 1747 aa9.51□□□□□ -0.89
SPG11-224ENST00000561268 NBPF14Q5TI25 921 aa9.51□□□□□ -0.89
SPG11-224ENST00000561268 IGSF1Q8N6C5 1336 aa9.51□□□□□ -0.89
SPG11-224ENST00000561268 PCDH11XQ9BZA7 1347 aa9.51□□□□□ -0.89
SPG11-224ENST00000561268 PCDH11YQ9BZA8 1340 aa9.51□□□□□ -0.89
SPG11-224ENST00000561268 BRCA1P38398 1863 aaKnown RBP9.51□□□□□ -0.89
SPG11-224ENST00000561268 MAP3K5Q99683 1374 aa9.5□□□□□ -0.89
SPG11-224ENST00000561268 NPC1L1Q9UHC9 1359 aa9.5□□□□□ -0.89
SPG11-224ENST00000561268 POLKQ9UBT6 870 aa9.5□□□□□ -0.89
SPG11-224ENST00000561268 KIF7Q2M1P5 1343 aa9.5□□□□□ -0.89
SPG11-224ENST00000561268 ZCRB1Q8TBF4 217 aaKnown RBP9.49□□□□□ -0.89
SPG11-224ENST00000561268 LTV1Q96GA3 475 aaPredicted RBP9.49□□□□□ -0.89
SPG11-224ENST00000561268 SGIP1Q9BQI5 828 aa9.49□□□□□ -0.89
SPG11-224ENST00000561268 LRRC4BQ9NT99 713 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms