RNA–Protein interactions for RNA: ENST00000560940.5

AP3S2-214, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 5 BASIC

Gene AP3S2, Length 519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-214ENST00000560940 TERF2IPQ9NYB0 399 aa9.69□□□□□ -0.86
AP3S2-214ENST00000560940 TFCP2L1Q9NZI6 479 aa9.69□□□□□ -0.86
AP3S2-214ENST00000560940 RGPD2P0DJD1 1756 aa9.68□□□□□ -0.86
AP3S2-214ENST00000560940 SHANK3Q9BYB0 1731 aa9.68□□□□□ -0.86
AP3S2-214ENST00000560940 KLHL34Q8N239 644 aa9.68□□□□□ -0.86
AP3S2-214ENST00000560940 DDX54Q8TDD1 881 aaKnown RBP9.68□□□□□ -0.86
AP3S2-214ENST00000560940 TMC1Q8TDI8 760 aa9.68□□□□□ -0.86
AP3S2-214ENST00000560940 PUS7Q96PZ0 661 aaKnown RBP9.68□□□□□ -0.86
AP3S2-214ENST00000560940 GRIN3BO60391 1043 aa9.67□□□□□ -0.86
AP3S2-214ENST00000560940 HMGB2P26583 209 aaKnown RBP9.67□□□□□ -0.86
AP3S2-214ENST00000560940 SIN3AQ96ST3 1273 aa9.67□□□□□ -0.86
AP3S2-214ENST00000560940 A0A1W2PP64 1363 aa9.66□□□□□ -0.86
AP3S2-214ENST00000560940 PRIM1P49642 420 aaKnown RBP9.66□□□□□ -0.86
AP3S2-214ENST00000560940 PELP1Q8IZL8 1130 aaKnown RBP9.66□□□□□ -0.86
AP3S2-214ENST00000560940 SYTL4Q96C24 671 aaPredicted RBP9.66□□□□□ -0.86
AP3S2-214ENST00000560940 CARD11Q9BXL7 1154 aa9.66□□□□□ -0.86
AP3S2-214ENST00000560940 SLC12A5Q9H2X9 1139 aa9.66□□□□□ -0.86
AP3S2-214ENST00000560940 TAF1LQ8IZX4 1826 aa9.66□□□□□ -0.86
AP3S2-214ENST00000560940 C5P01031 1676 aa9.65□□□□□ -0.86
AP3S2-214ENST00000560940 NEUROD1Q13562 356 aa9.65□□□□□ -0.86
AP3S2-214ENST00000560940 ZCRB1Q8TBF4 217 aaKnown RBP9.65□□□□□ -0.86
AP3S2-214ENST00000560940 NSD2O96028 1365 aa9.64□□□□□ -0.87
AP3S2-214ENST00000560940 USP47Q96K76 1375 aa9.64□□□□□ -0.87
AP3S2-214ENST00000560940 CGNL1Q0VF96 1302 aa9.64□□□□□ -0.87
AP3S2-214ENST00000560940 SLC24A1O60721 1099 aa9.64□□□□□ -0.87
AP3S2-214ENST00000560940 NLGN2Q8NFZ4 835 aa9.64□□□□□ -0.87
AP3S2-214ENST00000560940 LTV1Q96GA3 475 aaPredicted RBP9.64□□□□□ -0.87
AP3S2-214ENST00000560940 COG3Q96JB2 828 aa9.64□□□□□ -0.87
AP3S2-214ENST00000560940 CCNL1Q9UK58 526 aaPredicted RBP9.64□□□□□ -0.87
AP3S2-214ENST00000560940 MAP3K19Q56UN5 1328 aa9.63□□□□□ -0.87
AP3S2-214ENST00000560940 HOXC9P31274 260 aa9.63□□□□□ -0.87
AP3S2-214ENST00000560940 AMPHP49418 695 aa9.63□□□□□ -0.87
AP3S2-214ENST00000560940 KCNQ4P56696 695 aa9.63□□□□□ -0.87
AP3S2-214ENST00000560940 IFFO2Q5TF58 517 aa9.63□□□□□ -0.87
AP3S2-214ENST00000560940 RTL1A6NKG5 1358 aa9.63□□□□□ -0.87
AP3S2-214ENST00000560940 MEGF6O75095 1541 aa9.62□□□□□ -0.87
AP3S2-214ENST00000560940 YBX3P16989 372 aaKnown RBP eCLIP9.62□□□□□ -0.872e-6■■□□□ 12.4
AP3S2-214ENST00000560940 COL23A1Q86Y22 540 aaPredicted RBP9.62□□□□□ -0.87
AP3S2-214ENST00000560940 FLAD1Q8NFF5 587 aa9.62□□□□□ -0.87
AP3S2-214ENST00000560940 FOXD4L1Q9NU39 408 aa9.62□□□□□ -0.87
AP3S2-214ENST00000560940 CD2APQ9Y5K6 639 aa9.62□□□□□ -0.87
AP3S2-214ENST00000560940 ITGB4P16144 1822 aa9.61□□□□□ -0.87
AP3S2-214ENST00000560940 ZBTB22O15209 634 aa9.61□□□□□ -0.87
AP3S2-214ENST00000560940 SMG6Q86US8 1419 aaKnown RBP9.61□□□□□ -0.87
AP3S2-214ENST00000560940 ATP10DQ9P241 1426 aa9.6□□□□□ -0.87
AP3S2-214ENST00000560940 RAPGEF4Q8WZA2 1011 aa9.6□□□□□ -0.87
AP3S2-214ENST00000560940 UBR3Q6ZT12 1888 aa9.59□□□□□ -0.87
AP3S2-214ENST00000560940 C4BP0C0L5 1744 aa9.59□□□□□ -0.87
AP3S2-214ENST00000560940 NSD3Q9BZ95 1437 aa9.59□□□□□ -0.87
AP3S2-214ENST00000560940 GPBP1L1Q9HC44 474 aaPredicted RBP9.59□□□□□ -0.87
AP3S2-214ENST00000560940 KIF24Q5T7B8 1368 aa9.59□□□□□ -0.87
AP3S2-214ENST00000560940 KIF20BQ96Q89 1820 aa9.59□□□□□ -0.88
AP3S2-214ENST00000560940 PCDH11XQ9BZA7 1347 aa9.58□□□□□ -0.88
AP3S2-214ENST00000560940 PCDH11YQ9BZA8 1340 aa9.58□□□□□ -0.88
AP3S2-214ENST00000560940 TATP17735 454 aaPredicted RBP9.58□□□□□ -0.88
AP3S2-214ENST00000560940 NBPF6Q5VWK0 638 aa9.58□□□□□ -0.88
AP3S2-214ENST00000560940 MSL1Q68DK7 614 aa9.58□□□□□ -0.88
AP3S2-214ENST00000560940 NBPF4Q96M43 638 aa9.58□□□□□ -0.88
AP3S2-214ENST00000560940 TESK2Q96S53 571 aa9.58□□□□□ -0.88
AP3S2-214ENST00000560940 PKD1L3Q7Z443 1732 aa9.58□□□□□ -0.88
AP3S2-214ENST00000560940 ADCY9O60503 1353 aa9.58□□□□□ -0.88
AP3S2-214ENST00000560940 PALLDQ8WX93 1383 aa9.58□□□□□ -0.88
AP3S2-214ENST00000560940 TOGARAM1Q9Y4F4 1720 aa9.57□□□□□ -0.88
AP3S2-214ENST00000560940 FBLN1P23142 703 aa9.57□□□□□ -0.88
AP3S2-214ENST00000560940 SMARCC1Q92922 1105 aaPredicted RBP9.57□□□□□ -0.88
AP3S2-214ENST00000560940 INSRP06213 1382 aa9.57□□□□□ -0.88
AP3S2-214ENST00000560940 TONSLQ96HA7 1378 aa9.57□□□□□ -0.88
AP3S2-214ENST00000560940 MAP2P11137 1827 aaKnown RBP9.56□□□□□ -0.88
AP3S2-214ENST00000560940 ST20-MTHFSA0A0A6YYL1 179 aa9.56□□□□□ -0.88
AP3S2-214ENST00000560940 FYB1O15117 783 aa9.56□□□□□ -0.88
AP3S2-214ENST00000560940 HSPA6P17066 643 aa9.56□□□□□ -0.88
AP3S2-214ENST00000560940 RRS1Q15050 365 aaKnown RBP9.56□□□□□ -0.88
AP3S2-214ENST00000560940 MPRIPQ6WCQ1 1025 aa9.56□□□□□ -0.88
AP3S2-214ENST00000560940 AK7Q96M32 723 aa9.56□□□□□ -0.88
AP3S2-214ENST00000560940 FLT4P35916 1363 aa9.55□□□□□ -0.88
AP3S2-214ENST00000560940 USHBP1Q8N6Y0 703 aa9.55□□□□□ -0.88
AP3S2-214ENST00000560940 KIF13BQ9NQT8 1826 aa9.54□□□□□ -0.88
AP3S2-214ENST00000560940 ANKRD26Q9UPS8 1709 aa9.54□□□□□ -0.88
AP3S2-214ENST00000560940 CYP27B1O15528 508 aa9.54□□□□□ -0.88
AP3S2-214ENST00000560940 SSFA2P28290 1259 aa9.54□□□□□ -0.88
AP3S2-214ENST00000560940 GGNBP2Q9H3C7 697 aa9.54□□□□□ -0.88
AP3S2-214ENST00000560940 IGSF1Q8N6C5 1336 aa9.54□□□□□ -0.88
AP3S2-214ENST00000560940 CICQ96RK0 1608 aaPredicted RBP9.53□□□□□ -0.88
AP3S2-214ENST00000560940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.53□□□□□ -0.88
AP3S2-214ENST00000560940 SLC4A2P04920 1241 aa9.53□□□□□ -0.88
AP3S2-214ENST00000560940 HSP90AB2PQ58FF8 381 aa9.53□□□□□ -0.88
AP3S2-214ENST00000560940 TMF1P82094 1093 aa9.52□□□□□ -0.89
AP3S2-214ENST00000560940 NCAPD2Q15021 1401 aa9.52□□□□□ -0.89
AP3S2-214ENST00000560940 NKX1-1Q15270 411 aaPredicted RBP9.52□□□□□ -0.89
AP3S2-214ENST00000560940 CDCA8Q53HL2 280 aa9.52□□□□□ -0.89
AP3S2-214ENST00000560940 ZNF526Q8TF50 670 aaPredicted RBP9.52□□□□□ -0.89
AP3S2-214ENST00000560940 SPG7Q9UQ90 795 aa9.52□□□□□ -0.89
AP3S2-214ENST00000560940 ZNF831Q5JPB2 1677 aa9.51□□□□□ -0.89
AP3S2-214ENST00000560940 LOC102724428A0A0B4J2F2 783 aa9.51□□□□□ -0.89
AP3S2-214ENST00000560940 PHF14O94880 888 aa9.51□□□□□ -0.89
AP3S2-214ENST00000560940 SIK1P57059 783 aa9.51□□□□□ -0.89
AP3S2-214ENST00000560940 PIGBQ92521 554 aa9.51□□□□□ -0.89
AP3S2-214ENST00000560940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.51□□□□□ -0.89
AP3S2-214ENST00000560940 KIAA1551Q9HCM1 1747 aa9.51□□□□□ -0.89
AP3S2-214ENST00000560940 N4BP2Q86UW6 1770 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms