RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 NEURL4Q96JN8 1562 aa9.63□□□□□ -0.87
MARK3-212ENST00000558223 CFAP74Q9C0B2 1584 aa9.63□□□□□ -0.87
MARK3-212ENST00000558223 SMARCA5O60264 1052 aaPredicted RBP9.63□□□□□ -0.87
MARK3-212ENST00000558223 TSR1Q2NL82 804 aaKnown RBP9.63□□□□□ -0.87
MARK3-212ENST00000558223 ERICH6BQ5W0A0 696 aa9.63□□□□□ -0.87
MARK3-212ENST00000558223 BCL2L13Q9BXK5 485 aa9.63□□□□□ -0.87
MARK3-212ENST00000558223 PRAG1Q86YV5 1406 aa9.63□□□□□ -0.87
MARK3-212ENST00000558223 ADGRL1O94910 1474 aa9.62□□□□□ -0.87
MARK3-212ENST00000558223 MAP3K7O43318 606 aa9.62□□□□□ -0.87
MARK3-212ENST00000558223 USP17L8P0C7I0 530 aa9.62□□□□□ -0.87
MARK3-212ENST00000558223 ZNF16P17020 682 aaPredicted RBP9.62□□□□□ -0.87
MARK3-212ENST00000558223 SPATA32Q96LK8 384 aa9.62□□□□□ -0.87
MARK3-212ENST00000558223 C8orf37Q96NL8 207 aa9.62□□□□□ -0.87
MARK3-212ENST00000558223 PTPRTO14522 1441 aa9.62□□□□□ -0.87
MARK3-212ENST00000558223 SCAPERQ9BY12 1400 aa9.62□□□□□ -0.87
MARK3-212ENST00000558223 POLR1AO95602 1720 aaPredicted RBP9.62□□□□□ -0.87
MARK3-212ENST00000558223 ZNF518AQ6AHZ1 1483 aa9.61□□□□□ -0.87
MARK3-212ENST00000558223 LAMC1P11047 1609 aa9.61□□□□□ -0.87
MARK3-212ENST00000558223 PPP1R3GB7ZBB8 358 aa9.61□□□□□ -0.87
MARK3-212ENST00000558223 RALBP1Q15311 655 aa9.61□□□□□ -0.87
MARK3-212ENST00000558223 PROX2Q3B8N5 592 aa9.61□□□□□ -0.87
MARK3-212ENST00000558223 SPIRE2Q8WWL2 714 aa9.61□□□□□ -0.87
MARK3-212ENST00000558223 EPAS1Q99814 870 aa9.61□□□□□ -0.87
MARK3-212ENST00000558223 ZFYVE16Q7Z3T8 1539 aa9.61□□□□□ -0.87
MARK3-212ENST00000558223 KDM5CP41229 1560 aa9.6□□□□□ -0.87
MARK3-212ENST00000558223 SPTLC1O15269 473 aa9.6□□□□□ -0.87
MARK3-212ENST00000558223 NCLP19338 710 aaKnown RBP9.6□□□□□ -0.87
MARK3-212ENST00000558223 PTPN5P54829 565 aa9.6□□□□□ -0.87
MARK3-212ENST00000558223 EN1Q05925 392 aaPredicted RBP9.6□□□□□ -0.87
MARK3-212ENST00000558223 VAC14Q08AM6 782 aa9.6□□□□□ -0.87
MARK3-212ENST00000558223 FAM161AQ3B820 660 aa9.6□□□□□ -0.87
MARK3-212ENST00000558223 ZNF326Q5BKZ1 582 aaKnown RBP9.6□□□□□ -0.87
MARK3-212ENST00000558223 C6orf132Q5T0Z8 1188 aa9.6□□□□□ -0.87
MARK3-212ENST00000558223 DNAJC14Q6Y2X3 702 aaPredicted RBP9.6□□□□□ -0.87
MARK3-212ENST00000558223 AFAP1Q8N556 730 aa9.6□□□□□ -0.87
MARK3-212ENST00000558223 ATP7AQ04656 1500 aa9.6□□□□□ -0.87
MARK3-212ENST00000558223 PLA2R1Q13018 1463 aa9.59□□□□□ -0.87
MARK3-212ENST00000558223 NEO1Q92859 1461 aa9.59□□□□□ -0.87
MARK3-212ENST00000558223 CD109Q6YHK3 1445 aa9.59□□□□□ -0.87
MARK3-212ENST00000558223 C11orf95C9JLR9 678 aaPredicted RBP9.59□□□□□ -0.87
MARK3-212ENST00000558223 PRDM15P57071 1507 aaPredicted RBP9.59□□□□□ -0.87
MARK3-212ENST00000558223 MLH3Q9UHC1 1453 aa9.59□□□□□ -0.87
MARK3-212ENST00000558223 TMF1P82094 1093 aa9.58□□□□□ -0.88
MARK3-212ENST00000558223 RSBN1LQ6PCB5 846 aaPredicted RBP9.58□□□□□ -0.88
MARK3-212ENST00000558223 MRPL50Q8N5N7 158 aaKnown RBP9.58□□□□□ -0.88
MARK3-212ENST00000558223 GIPC2Q8TF65 315 aa9.58□□□□□ -0.88
MARK3-212ENST00000558223 ALG2Q9H553 416 aa9.58□□□□□ -0.88
MARK3-212ENST00000558223 INO80Q9ULG1 1556 aaPredicted RBP9.58□□□□□ -0.88
MARK3-212ENST00000558223 TRPM2O94759 1503 aa9.57□□□□□ -0.88
MARK3-212ENST00000558223 LMTK2Q8IWU2 1503 aa9.57□□□□□ -0.88
MARK3-212ENST00000558223 DEPDC5O75140 1603 aa9.57□□□□□ -0.88
MARK3-212ENST00000558223 ST20-MTHFSA0A0A6YYL1 179 aa9.57□□□□□ -0.88
MARK3-212ENST00000558223 NUTM2BA6NNL0 878 aaPredicted RBP9.57□□□□□ -0.88
MARK3-212ENST00000558223 NUTM2EB1AL46 878 aaPredicted RBP9.57□□□□□ -0.88
MARK3-212ENST00000558223 NUTM2DQ5VT03 806 aaPredicted RBP9.57□□□□□ -0.88
MARK3-212ENST00000558223 NUTM1Q86Y26 1132 aa9.57□□□□□ -0.88
MARK3-212ENST00000558223 NUTM2AQ8IVF1 878 aaPredicted RBP9.57□□□□□ -0.88
MARK3-212ENST00000558223 PXYLP1Q8TE99 480 aa9.57□□□□□ -0.88
MARK3-212ENST00000558223 RBM33Q96EV2 1170 aaKnown RBP9.57□□□□□ -0.88
MARK3-212ENST00000558223 MRS2Q9HD23 443 aa9.57□□□□□ -0.88
MARK3-212ENST00000558223 PPP1R1BQ9UD71 204 aaPredicted RBP9.57□□□□□ -0.88
MARK3-212ENST00000558223 VWDEQ8N2E2 1590 aa9.57□□□□□ -0.88
MARK3-212ENST00000558223 A2MP01023 1474 aa9.56□□□□□ -0.88
MARK3-212ENST00000558223 EIF3AQ14152 1382 aaKnown RBP9.56□□□□□ -0.88
MARK3-212ENST00000558223 KIF3BO15066 747 aa9.56□□□□□ -0.88
MARK3-212ENST00000558223 LILRB3O75022 631 aa9.56□□□□□ -0.88
MARK3-212ENST00000558223 QPCTQ16769 361 aa9.56□□□□□ -0.88
MARK3-212ENST00000558223 GJD4Q96KN9 370 aaPredicted RBP9.56□□□□□ -0.88
MARK3-212ENST00000558223 RABGEF1Q9UJ41 708 aa9.56□□□□□ -0.88
MARK3-212ENST00000558223 RPGRIP1LQ68CZ1 1315 aa9.56□□□□□ -0.88
MARK3-212ENST00000558223 TET3O43151 1660 aa9.55□□□□□ -0.88
MARK3-212ENST00000558223 INSRP06213 1382 aa9.55□□□□□ -0.88
MARK3-212ENST00000558223 ARID4AP29374 1257 aaPredicted RBP9.55□□□□□ -0.88
MARK3-212ENST00000558223 ZC3H6P61129 1189 aaKnown RBP9.55□□□□□ -0.88
MARK3-212ENST00000558223 HNRNPUQ00839 825 aaKnown RBP eCLIP9.55□□□□□ -0.88
MARK3-212ENST00000558223 RGL3Q3MIN7 710 aa9.55□□□□□ -0.88
MARK3-212ENST00000558223 THSD4Q6ZMP0 1018 aa9.55□□□□□ -0.88
MARK3-212ENST00000558223 UBXN4Q92575 508 aa9.55□□□□□ -0.88
MARK3-212ENST00000558223 NBPF3Q9H094 633 aa9.55□□□□□ -0.88
MARK3-212ENST00000558223 SUPT16HQ9Y5B9 1047 aaKnown RBP9.55□□□□□ -0.88
MARK3-212ENST00000558223 MAFBQ9Y5Q3 323 aaPredicted RBP9.55□□□□□ -0.88
MARK3-212ENST00000558223 ZBED9Q6R2W3 1325 aa9.55□□□□□ -0.88
MARK3-212ENST00000558223 BRD4O60885 1362 aaPredicted RBP9.54□□□□□ -0.88
MARK3-212ENST00000558223 GOLGA8CPA6NN73 597 aa9.54□□□□□ -0.88
MARK3-212ENST00000558223 SOX11P35716 441 aa9.54□□□□□ -0.88
MARK3-212ENST00000558223 RTL5Q5HYW3 569 aaPredicted RBP9.54□□□□□ -0.88
MARK3-212ENST00000558223 ANKRD13AQ8IZ07 590 aa9.54□□□□□ -0.88
MARK3-212ENST00000558223 WNT2BQ93097 391 aa9.54□□□□□ -0.88
MARK3-212ENST00000558223 UCN2Q96RP3 112 aa9.54□□□□□ -0.88
MARK3-212ENST00000558223 POGZQ7Z3K3 1410 aa9.54□□□□□ -0.88
MARK3-212ENST00000558223 TRPM1Q7Z4N2 1603 aa9.53□□□□□ -0.88
MARK3-212ENST00000558223 CWC22Q9HCG8 908 aaKnown RBP9.53□□□□□ -0.88
MARK3-212ENST00000558223 KIAA1468Q9P260 1216 aa9.53□□□□□ -0.88
MARK3-212ENST00000558223 MYBBP1AQ9BQG0 1328 aaKnown RBP9.53□□□□□ -0.88
MARK3-212ENST00000558223 MARSP56192 900 aaKnown RBP9.52□□□□□ -0.89
MARK3-212ENST00000558223 SEMA3FQ13275 785 aa9.52□□□□□ -0.89
MARK3-212ENST00000558223 SF3A1Q15459 793 aaKnown RBP9.52□□□□□ -0.89
MARK3-212ENST00000558223 TMC1Q8TDI8 760 aa9.52□□□□□ -0.89
MARK3-212ENST00000558223 ADGRG1Q9Y653 693 aa9.52□□□□□ -0.89
MARK3-212ENST00000558223 MOXD2PA6NHM9 499 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms