RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 PSME1Q06323 249 aa5.28□□□□□ -1.56
HMGB1P14-201ENST00000557424 SCARF1Q14162 830 aa5.28□□□□□ -1.56
HMGB1P14-201ENST00000557424 OXLD1Q5BKU9 147 aa5.28□□□□□ -1.56
HMGB1P14-201ENST00000557424 PPP1R26Q5T8A7 1209 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P14-201ENST00000557424 OCSTAMPQ9BR26 566 aa5.28□□□□□ -1.56
HMGB1P14-201ENST00000557424 PATL2C9JE40 543 aaKnown RBP5.27□□□□□ -1.57
HMGB1P14-201ENST00000557424 BACH1O14867 736 aa5.27□□□□□ -1.57
HMGB1P14-201ENST00000557424 WDR4P57081 412 aaKnown RBP5.27□□□□□ -1.57
HMGB1P14-201ENST00000557424 ERVK-9P63128 1117 aa5.27□□□□□ -1.57
HMGB1P14-201ENST00000557424 LARGE2Q8N3Y3 721 aa5.27□□□□□ -1.57
HMGB1P14-201ENST00000557424 NBPF15Q8N660 670 aa5.27□□□□□ -1.57
HMGB1P14-201ENST00000557424 RETREG2Q8NC44 543 aa5.27□□□□□ -1.57
HMGB1P14-201ENST00000557424 TSEN34Q9BSV6 310 aaKnown RBP5.27□□□□□ -1.57
HMGB1P14-201ENST00000557424 CHIC2Q9UKJ5 165 aa5.27□□□□□ -1.57
HMGB1P14-201ENST00000557424 MAFBQ9Y5Q3 323 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P14-201ENST00000557424 FAM196BA6NMK8 535 aa5.26□□□□□ -1.57
HMGB1P14-201ENST00000557424 ERVH48-1M5A8F1 160 aa5.26□□□□□ -1.57
HMGB1P14-201ENST00000557424 GNRH1P01148 92 aa5.26□□□□□ -1.57
HMGB1P14-201ENST00000557424 CSB-PGBD3P0DP91 1061 aa5.26□□□□□ -1.57
HMGB1P14-201ENST00000557424 RFX1P22670 979 aa5.26□□□□□ -1.57
HMGB1P14-201ENST00000557424 LMOD1P29536 600 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P14-201ENST00000557424 NCOA4Q13772 614 aa5.26□□□□□ -1.57
HMGB1P14-201ENST00000557424 EMID1Q96A84 441 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P14-201ENST00000557424 GZF1Q9H116 711 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P14-201ENST00000557424 TFIP11Q9UBB9 837 aaKnown RBP5.26□□□□□ -1.57
HMGB1P14-201ENST00000557424 CHMP3Q9Y3E7 222 aa5.26□□□□□ -1.57
HMGB1P14-201ENST00000557424 CAPN5O15484 640 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P14-201ENST00000557424 ZIC2O95409 532 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P14-201ENST00000557424 ADH1AP07327 375 aa5.25□□□□□ -1.57
HMGB1P14-201ENST00000557424 GRM5P41594 1212 aa5.25□□□□□ -1.57
HMGB1P14-201ENST00000557424 SMCPP49901 116 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P14-201ENST00000557424 GTF2IP78347 998 aa5.25□□□□□ -1.57
HMGB1P14-201ENST00000557424 CRIPAKQ8N1N5 446 aa5.25□□□□□ -1.57
HMGB1P14-201ENST00000557424 PHTF2Q8N3S3 785 aa5.25□□□□□ -1.57
HMGB1P14-201ENST00000557424 NLRP3Q96P20 1036 aa5.25□□□□□ -1.57
HMGB1P14-201ENST00000557424 DNAAF2Q9NVR5 837 aaKnown RBP5.25□□□□□ -1.57
HMGB1P14-201ENST00000557424 USTQ9Y2C2 406 aa5.25□□□□□ -1.57
HMGB1P14-201ENST00000557424 AXIN1O15169 862 aa5.24□□□□□ -1.57
HMGB1P14-201ENST00000557424 AVPP01185 164 aa5.24□□□□□ -1.57
HMGB1P14-201ENST00000557424 SMPD1P17405 629 aa5.24□□□□□ -1.57
HMGB1P14-201ENST00000557424 RASA1P20936 1047 aa5.24□□□□□ -1.57
HMGB1P14-201ENST00000557424 ELOAQ14241 798 aaKnown RBP5.24□□□□□ -1.57
HMGB1P14-201ENST00000557424 ZNF784Q8NCA9 323 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P14-201ENST00000557424 ADAMTS19Q8TE59 1207 aa5.24□□□□□ -1.57
HMGB1P14-201ENST00000557424 KIFC2Q96AC6 838 aa5.24□□□□□ -1.57
HMGB1P14-201ENST00000557424 UCN2Q96RP3 112 aa5.24□□□□□ -1.57
HMGB1P14-201ENST00000557424 SENP2Q9HC62 589 aa5.24□□□□□ -1.57
HMGB1P14-201ENST00000557424 MKRN1Q9UHC7 482 aaKnown RBP5.24□□□□□ -1.57
HMGB1P14-201ENST00000557424 WASLO00401 505 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P14-201ENST00000557424 GPC1P35052 558 aa5.23□□□□□ -1.57
HMGB1P14-201ENST00000557424 RBM25P49756 843 aaKnown RBP5.23□□□□□ -1.57
HMGB1P14-201ENST00000557424 MFAP1P55081 439 aaKnown RBP5.23□□□□□ -1.57
HMGB1P14-201ENST00000557424 TBC1D9Q6ZT07 1266 aa5.23□□□□□ -1.57
HMGB1P14-201ENST00000557424 MEIOBQ8N635 442 aa5.23□□□□□ -1.57
HMGB1P14-201ENST00000557424 CYLDQ9NQC7 956 aa5.23□□□□□ -1.57
HMGB1P14-201ENST00000557424 J3QL48 77 aa5.22□□□□□ -1.57
HMGB1P14-201ENST00000557424 M0R2N6 131 aa5.22□□□□□ -1.57
HMGB1P14-201ENST00000557424 ATG7O95352 703 aa5.22□□□□□ -1.57
HMGB1P14-201ENST00000557424 TIMP2P16035 220 aa5.22□□□□□ -1.57
HMGB1P14-201ENST00000557424 SEC13P55735 322 aa5.22□□□□□ -1.57
HMGB1P14-201ENST00000557424 SWI5Q1ZZU3 235 aa5.22□□□□□ -1.57
HMGB1P14-201ENST00000557424 CFAP70Q5T0N1 1121 aa5.22□□□□□ -1.57
HMGB1P14-201ENST00000557424 TMCO4Q5TGY1 634 aa5.22□□□□□ -1.57
HMGB1P14-201ENST00000557424 Q6ZVU0 165 aa5.22□□□□□ -1.57
HMGB1P14-201ENST00000557424 SIX5Q8N196 739 aa5.22□□□□□ -1.57
HMGB1P14-201ENST00000557424 OGFOD1Q8N543 542 aa5.22□□□□□ -1.57
HMGB1P14-201ENST00000557424 FAM200AQ8TCP9 573 aa5.22□□□□□ -1.57
HMGB1P14-201ENST00000557424 CCDC85AQ96PX6 553 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P14-201ENST00000557424 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB1P14-201ENST00000557424 USP17L15C9J2P7 530 aa5.21□□□□□ -1.58
HMGB1P14-201ENST00000557424 USP17L10C9JJH3 530 aa5.21□□□□□ -1.58
HMGB1P14-201ENST00000557424 USP17L13C9JLJ4 530 aa5.21□□□□□ -1.58
HMGB1P14-201ENST00000557424 USP17L12C9JPN9 530 aa5.21□□□□□ -1.58
HMGB1P14-201ENST00000557424 USP17L11C9JVI0 530 aa5.21□□□□□ -1.58
HMGB1P14-201ENST00000557424 USP17L21D6R901 530 aa5.21□□□□□ -1.58
HMGB1P14-201ENST00000557424 USP17L18D6R9N7 530 aa5.21□□□□□ -1.58
HMGB1P14-201ENST00000557424 USP17L22D6RA61 530 aa5.21□□□□□ -1.58
HMGB1P14-201ENST00000557424 USP17L17D6RBQ6 530 aa5.21□□□□□ -1.58
HMGB1P14-201ENST00000557424 USP17L19D6RCP7 530 aa5.21□□□□□ -1.58
HMGB1P14-201ENST00000557424 USP17L20D6RJB6 530 aa5.21□□□□□ -1.58
HMGB1P14-201ENST00000557424 NR3C2P08235 984 aa5.21□□□□□ -1.58
HMGB1P14-201ENST00000557424 USP17L24Q0WX57 530 aa5.21□□□□□ -1.58
HMGB1P14-201ENST00000557424 GNASQ5JWF2 1037 aa5.21□□□□□ -1.58
HMGB1P14-201ENST00000557424 TRIM67Q6ZTA4 783 aa5.21□□□□□ -1.58
HMGB1P14-201ENST00000557424 LINC00528Q8N1L1 170 aa5.21□□□□□ -1.58
HMGB1P14-201ENST00000557424 PIK3CDO00329 1044 aa5.2□□□□□ -1.58
HMGB1P14-201ENST00000557424 BMP2P12643 396 aa5.2□□□□□ -1.58
HMGB1P14-201ENST00000557424 CLN3Q13286 438 aa5.2□□□□□ -1.58
HMGB1P14-201ENST00000557424 GAS2L2Q8NHY3 880 aa5.2□□□□□ -1.58
HMGB1P14-201ENST00000557424 ITPKCQ96DU7 683 aa5.2□□□□□ -1.58
HMGB1P14-201ENST00000557424 CDCA7Q9BWT1 371 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P14-201ENST00000557424 PTGIRP43119 386 aa5.19□□□□□ -1.58
HMGB1P14-201ENST00000557424 GDF10P55107 478 aa5.19□□□□□ -1.58
HMGB1P14-201ENST00000557424 HIF1AQ16665 826 aa5.19□□□□□ -1.58
HMGB1P14-201ENST00000557424 SLC27A3Q5K4L6 730 aa5.19□□□□□ -1.58
HMGB1P14-201ENST00000557424 LCE2AQ5TA79 106 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P14-201ENST00000557424 CCDC102BQ68D86 513 aa5.19□□□□□ -1.58
HMGB1P14-201ENST00000557424 MRPL14Q6P1L8 145 aaKnown RBP5.19□□□□□ -1.58
HMGB1P14-201ENST00000557424 ANKMY2Q8IV38 441 aa5.19□□□□□ -1.58
HMGB1P14-201ENST00000557424 DEPDC4Q8N2C3 294 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms