RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 TBC1D2Q9BYX2 928 aa15.99■□□□□ 0.15
PPP4R3A-206ENST00000554943 HMOX1P09601 288 aa15.98■□□□□ 0.15
PPP4R3A-206ENST00000554943 ABCC6O95255 1503 aa15.98■□□□□ 0.15
PPP4R3A-206ENST00000554943 FLT4P35916 1363 aa15.98■□□□□ 0.15
PPP4R3A-206ENST00000554943 THUMPD2Q9BTF0 503 aaKnown RBP15.98■□□□□ 0.15
PPP4R3A-206ENST00000554943 CHD1LQ86WJ1 897 aa15.97■□□□□ 0.15
PPP4R3A-206ENST00000554943 ITPRIPQ8IWB1 547 aa15.97■□□□□ 0.15
PPP4R3A-206ENST00000554943 SNX21Q969T3 373 aa15.96■□□□□ 0.15
PPP4R3A-206ENST00000554943 TWISTNBQ3B726 338 aaPredicted RBP15.95■□□□□ 0.14
PPP4R3A-206ENST00000554943 AEBP1Q8IUX7 1158 aa15.95■□□□□ 0.14
PPP4R3A-206ENST00000554943 FAM83GA6ND36 823 aa15.95■□□□□ 0.14
PPP4R3A-206ENST00000554943 MSH6P52701 1360 aa15.95■□□□□ 0.14
PPP4R3A-206ENST00000554943 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
PPP4R3A-206ENST00000554943 KIF1AQ12756 1690 aa15.94■□□□□ 0.14
PPP4R3A-206ENST00000554943 MLECQ14165 292 aa15.94■□□□□ 0.14
PPP4R3A-206ENST00000554943 PTPRCP08575 1304 aa15.94■□□□□ 0.14
PPP4R3A-206ENST00000554943 COL18A1P39060 1754 aa15.93■□□□□ 0.14
PPP4R3A-206ENST00000554943 HTATSF1O43719 755 aaKnown RBP15.93■□□□□ 0.14
PPP4R3A-206ENST00000554943 CHMP4BQ9H444 224 aaKnown RBP15.93■□□□□ 0.14
PPP4R3A-206ENST00000554943 DCTPP1Q9H773 170 aa15.93■□□□□ 0.14
PPP4R3A-206ENST00000554943 SOS1Q07889 1333 aaPredicted RBP15.92■□□□□ 0.14
PPP4R3A-206ENST00000554943 CEMIPQ8WUJ3 1361 aa15.92■□□□□ 0.14
PPP4R3A-206ENST00000554943 OVOS2A0A0G2JMS6 1433 aa15.92■□□□□ 0.14
PPP4R3A-206ENST00000554943 GSE1Q14687 1217 aa15.92■□□□□ 0.14
PPP4R3A-206ENST00000554943 API5Q9BZZ5 524 aaKnown RBP15.91■□□□□ 0.14
PPP4R3A-206ENST00000554943 AMOTL2Q9Y2J4 779 aa15.91■□□□□ 0.14
PPP4R3A-206ENST00000554943 SALL3Q9BXA9 1300 aa15.91■□□□□ 0.14
PPP4R3A-206ENST00000554943 FRAT2O75474 233 aaPredicted RBP15.9■□□□□ 0.14
PPP4R3A-206ENST00000554943 HSP90AB2PQ58FF8 381 aa15.9■□□□□ 0.14
PPP4R3A-206ENST00000554943 IL17RAQ96F46 866 aa15.9■□□□□ 0.14
PPP4R3A-206ENST00000554943 RTL5Q5HYW3 569 aaPredicted RBP15.9■□□□□ 0.14
PPP4R3A-206ENST00000554943 BABAM1Q9NWV8 329 aa15.9■□□□□ 0.14
PPP4R3A-206ENST00000554943 C22orf23Q9BZE7 217 aa15.9■□□□□ 0.14
PPP4R3A-206ENST00000554943 GLI3P10071 1580 aa15.89■□□□□ 0.13
PPP4R3A-206ENST00000554943 ANKRD44Q8N8A2 993 aa15.89■□□□□ 0.13
PPP4R3A-206ENST00000554943 RGPD5Q99666 1765 aa15.89■□□□□ 0.13
PPP4R3A-206ENST00000554943 SCN11AQ9UI33 1791 aa15.88■□□□□ 0.13
PPP4R3A-206ENST00000554943 IBTKQ9P2D0 1353 aaPredicted RBP15.88■□□□□ 0.13
PPP4R3A-206ENST00000554943 GSPT1P15170 499 aaKnown RBP15.88■□□□□ 0.13
PPP4R3A-206ENST00000554943 SULT6B1Q6IMI4 303 aa15.88■□□□□ 0.13
PPP4R3A-206ENST00000554943 STRCP1A6NGW2 1772 aa15.88■□□□□ 0.13
PPP4R3A-206ENST00000554943 ADGRL3Q9HAR2 1447 aa15.87■□□□□ 0.13
PPP4R3A-206ENST00000554943 BECN1Q14457 450 aa15.87■□□□□ 0.13
PPP4R3A-206ENST00000554943 DCTN1Q14203 1278 aa15.87■□□□□ 0.13
PPP4R3A-206ENST00000554943 CLEC17AQ6ZS10 378 aa15.87■□□□□ 0.13
PPP4R3A-206ENST00000554943 PLEKHM2Q8IWE5 1019 aa15.87■□□□□ 0.13
PPP4R3A-206ENST00000554943 PARP4Q9UKK3 1724 aaKnown RBP15.87■□□□□ 0.13
PPP4R3A-206ENST00000554943 MTHFSDQ2M296 383 aaKnown RBP15.86■□□□□ 0.13
PPP4R3A-206ENST00000554943 PKD1L3Q7Z443 1732 aa15.86■□□□□ 0.13
PPP4R3A-206ENST00000554943 OSBPL3Q9H4L5 887 aa15.86■□□□□ 0.13
PPP4R3A-206ENST00000554943 CEP85Q6P2H3 762 aa15.86■□□□□ 0.13
PPP4R3A-206ENST00000554943 SETD1BQ9UPS6 1966 aaKnown RBP15.85■□□□□ 0.13
PPP4R3A-206ENST00000554943 EYA1Q99502 592 aa15.85■□□□□ 0.13
PPP4R3A-206ENST00000554943 AK9Q5TCS8 1911 aa15.85■□□□□ 0.13
PPP4R3A-206ENST00000554943 HEG1Q9ULI3 1381 aa15.84■□□□□ 0.13
PPP4R3A-206ENST00000554943 CEBPAP49715 358 aaPredicted RBP15.84■□□□□ 0.13
PPP4R3A-206ENST00000554943 C5P01031 1676 aa15.84■□□□□ 0.13
PPP4R3A-206ENST00000554943 ARXQ96QS3 562 aa15.84■□□□□ 0.13
PPP4R3A-206ENST00000554943 RPAP2Q8IXW5 612 aaPredicted RBP15.84■□□□□ 0.13
PPP4R3A-206ENST00000554943 THEMISQ8N1K5 641 aaPredicted RBP15.83■□□□□ 0.12
PPP4R3A-206ENST00000554943 PRKCSHP14314 528 aaPredicted RBP15.83■□□□□ 0.12
PPP4R3A-206ENST00000554943 HOXC9P31274 260 aa15.83■□□□□ 0.12
PPP4R3A-206ENST00000554943 KRT24Q2M2I5 525 aa15.83■□□□□ 0.12
PPP4R3A-206ENST00000554943 PLEKHG2Q9H7P9 1386 aa15.82■□□□□ 0.12
PPP4R3A-206ENST00000554943 XIRP1Q702N8 1843 aaKnown RBP15.82■□□□□ 0.12
PPP4R3A-206ENST00000554943 FSD2A1L4K1 749 aa15.82■□□□□ 0.12
PPP4R3A-206ENST00000554943 HAP1P54257 671 aaPredicted RBP15.82■□□□□ 0.12
PPP4R3A-206ENST00000554943 TBC1D9Q6ZT07 1266 aa15.82■□□□□ 0.12
PPP4R3A-206ENST00000554943 MCM10Q7L590 875 aa15.82■□□□□ 0.12
PPP4R3A-206ENST00000554943 EID1Q9Y6B2 187 aa15.82■□□□□ 0.12
PPP4R3A-206ENST00000554943 ESF1Q9H501 851 aaKnown RBP15.81■□□□□ 0.12
PPP4R3A-206ENST00000554943 SLC26A8Q96RN1 970 aa15.81■□□□□ 0.12
PPP4R3A-206ENST00000554943 LNPKQ9C0E8 428 aa15.81■□□□□ 0.12
PPP4R3A-206ENST00000554943 TTC22Q5TAA0 569 aa15.81■□□□□ 0.12
PPP4R3A-206ENST00000554943 UPF2Q9HAU5 1272 aaKnown RBP15.8■□□□□ 0.12
PPP4R3A-206ENST00000554943 MAP3K5Q99683 1374 aa15.8■□□□□ 0.12
PPP4R3A-206ENST00000554943 MRC1P22897 1456 aa15.8■□□□□ 0.12
PPP4R3A-206ENST00000554943 C1orf115Q9H7X2 142 aa15.79■□□□□ 0.12
PPP4R3A-206ENST00000554943 PAPPAQ13219 1627 aa15.79■□□□□ 0.12
PPP4R3A-206ENST00000554943 KCNA6P17658 529 aa15.79■□□□□ 0.12
PPP4R3A-206ENST00000554943 FOXO3O43524 673 aa15.79■□□□□ 0.12
PPP4R3A-206ENST00000554943 LAMB4A4D0S4 1761 aa15.79■□□□□ 0.12
PPP4R3A-206ENST00000554943 CD2BP2O95400 341 aaKnown RBP15.78■□□□□ 0.12
PPP4R3A-206ENST00000554943 UBR2Q8IWV8 1755 aa15.77■□□□□ 0.12
PPP4R3A-206ENST00000554943 CIZ1Q9ULV3 898 aaPredicted RBP15.77■□□□□ 0.12
PPP4R3A-206ENST00000554943 GAS2L2Q8NHY3 880 aa15.77■□□□□ 0.11
PPP4R3A-206ENST00000554943 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.77■□□□□ 0.11
PPP4R3A-206ENST00000554943 PLPPR3Q6T4P5 718 aa15.76■□□□□ 0.11
PPP4R3A-206ENST00000554943 IL17REQ8NFR9 667 aa15.76■□□□□ 0.11
PPP4R3A-206ENST00000554943 ANKRD45Q5TZF3 282 aa15.76■□□□□ 0.11
PPP4R3A-206ENST00000554943 CHMP5Q9NZZ3 219 aa15.75■□□□□ 0.11
PPP4R3A-206ENST00000554943 SHANK3Q9BYB0 1731 aa15.75■□□□□ 0.11
PPP4R3A-206ENST00000554943 PXDNQ92626 1479 aa15.75■□□□□ 0.11
PPP4R3A-206ENST00000554943 CYP2E1P05181 493 aaPredicted RBP15.75■□□□□ 0.11
PPP4R3A-206ENST00000554943 MFAP1P55081 439 aaKnown RBP15.75■□□□□ 0.11
PPP4R3A-206ENST00000554943 RAB3GAP1Q15042 981 aa15.75■□□□□ 0.11
PPP4R3A-206ENST00000554943 G2E3Q7L622 706 aa15.75■□□□□ 0.11
PPP4R3A-206ENST00000554943 MEIS3Q99687 375 aa15.75■□□□□ 0.11
PPP4R3A-206ENST00000554943 MCM4P33991 863 aa15.74■□□□□ 0.11
PPP4R3A-206ENST00000554943 USP26Q9BXU7 913 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms