RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 HDGFL1Q5TGJ6 251 aa6.3□□□□□ -1.4
SCFD1-213ENST00000554776 ERICH6Q7L0X2 663 aa6.3□□□□□ -1.4
SCFD1-213ENST00000554776 PLPP7Q8NBV4 271 aa6.3□□□□□ -1.4
SCFD1-213ENST00000554776 NFATC2IPQ8NCF5 419 aa6.3□□□□□ -1.4
SCFD1-213ENST00000554776 ATP5J2-PTCD1G3V325 749 aa6.29□□□□□ -1.4
SCFD1-213ENST00000554776 CYP2U1Q7Z449 544 aa6.29□□□□□ -1.4
SCFD1-213ENST00000554776 GLMNQ92990 594 aa6.29□□□□□ -1.4
SCFD1-213ENST00000554776 ZNF395Q9H8N7 513 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-213ENST00000554776 TTLL8A6PVC2 850 aa6.28□□□□□ -1.4
SCFD1-213ENST00000554776 MYCP01106 439 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-213ENST00000554776 USP4Q13107 963 aa6.28□□□□□ -1.4
SCFD1-213ENST00000554776 UCN2Q96RP3 112 aa6.28□□□□□ -1.4
SCFD1-213ENST00000554776 INSM2Q96T92 566 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-213ENST00000554776 SKIP12755 728 aa6.27□□□□□ -1.41
SCFD1-213ENST00000554776 CTSOP43234 321 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-213ENST00000554776 OXLD1Q5BKU9 147 aa6.27□□□□□ -1.41
SCFD1-213ENST00000554776 SIRT1Q96EB6 747 aa6.27□□□□□ -1.41
SCFD1-213ENST00000554776 ESF1Q9H501 851 aaKnown RBP6.27□□□□□ -1.41
SCFD1-213ENST00000554776 DNMT3LQ9UJW3 386 aa6.27□□□□□ -1.41
SCFD1-213ENST00000554776 A0A1W2PRU2 124 aa6.26□□□□□ -1.41
SCFD1-213ENST00000554776 SOBPA7XYQ1 873 aa6.26□□□□□ -1.41
SCFD1-213ENST00000554776 LZTS3O60299 673 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-213ENST00000554776 MAN1A2O60476 641 aa6.26□□□□□ -1.41
SCFD1-213ENST00000554776 GNRH1P01148 92 aa6.26□□□□□ -1.41
SCFD1-213ENST00000554776 FOXD4L5Q5VV16 416 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-213ENST00000554776 RNF217Q8TC41 542 aa6.26□□□□□ -1.41
SCFD1-213ENST00000554776 ZNF775Q96BV0 537 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-213ENST00000554776 POLMQ9NP87 494 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-213ENST00000554776 USP17L5A8MUK1 530 aa6.25□□□□□ -1.41
SCFD1-213ENST00000554776 RNF144AP50876 292 aaPredicted RBP6.25□□□□□ -1.41
SCFD1-213ENST00000554776 CLN3Q13286 438 aa6.25□□□□□ -1.41
SCFD1-213ENST00000554776 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.25□□□□□ -1.412e-7■□□□□ 8.5
SCFD1-213ENST00000554776 TBC1D9Q6ZT07 1266 aa6.25□□□□□ -1.41
SCFD1-213ENST00000554776 ARHGEF10LQ9HCE6 1279 aa6.25□□□□□ -1.41
SCFD1-213ENST00000554776 FIGNL2A6NMB9 653 aa6.24□□□□□ -1.41
SCFD1-213ENST00000554776 ATP9BO43861 1147 aa6.24□□□□□ -1.41
SCFD1-213ENST00000554776 GPC1P35052 558 aa6.24□□□□□ -1.41
SCFD1-213ENST00000554776 NCOA4Q13772 614 aa6.24□□□□□ -1.41
SCFD1-213ENST00000554776 EML3Q32P44 896 aa6.24□□□□□ -1.41
SCFD1-213ENST00000554776 PLEKHM2Q8IWE5 1019 aa6.24□□□□□ -1.41
SCFD1-213ENST00000554776 CALR3Q96L12 384 aaKnown RBP6.24□□□□□ -1.41
SCFD1-213ENST00000554776 ZNF777Q9ULD5 760 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-213ENST00000554776 MEN1O00255 615 aa6.23□□□□□ -1.41
SCFD1-213ENST00000554776 IL2RAP01589 272 aa6.23□□□□□ -1.41
SCFD1-213ENST00000554776 RAB6BQ9NRW1 208 aa6.23□□□□□ -1.41
SCFD1-213ENST00000554776 NXF1Q9UBU9 619 aaKnown RBP6.23□□□□□ -1.41
SCFD1-213ENST00000554776 HRH3Q9Y5N1 445 aa6.23□□□□□ -1.41
SCFD1-213ENST00000554776 USP17L3A6NCW0 530 aa6.22□□□□□ -1.41
SCFD1-213ENST00000554776 USP17L4A6NCW7 530 aa6.22□□□□□ -1.41
SCFD1-213ENST00000554776 TERTO14746 1132 aaKnown RBP6.22□□□□□ -1.41
SCFD1-213ENST00000554776 USP17L2Q6R6M4 530 aa6.22□□□□□ -1.41
SCFD1-213ENST00000554776 USP17L1Q7RTZ2 530 aa6.22□□□□□ -1.41
SCFD1-213ENST00000554776 NPAS3Q8IXF0 933 aa6.22□□□□□ -1.41
SCFD1-213ENST00000554776 DEPDC4Q8N2C3 294 aa6.22□□□□□ -1.41
SCFD1-213ENST00000554776 XAGE2Q96GT9 111 aa6.22□□□□□ -1.41
SCFD1-213ENST00000554776 NLRP3Q96P20 1036 aa6.22□□□□□ -1.41
SCFD1-213ENST00000554776 ESYT1Q9BSJ8 1104 aa6.22□□□□□ -1.41
SCFD1-213ENST00000554776 C1orf115Q9H7X2 142 aa6.22□□□□□ -1.41
SCFD1-213ENST00000554776 ETNK1Q9HBU6 452 aa6.22□□□□□ -1.41
SCFD1-213ENST00000554776 NOD1Q9Y239 953 aa6.22□□□□□ -1.41
SCFD1-213ENST00000554776 PCDHGA11Q9Y5H2 935 aa6.22□□□□□ -1.41
SCFD1-213ENST00000554776 WASLO00401 505 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-213ENST00000554776 STAU1O95793 577 aaKnown RBP6.21□□□□□ -1.42
SCFD1-213ENST00000554776 SCNN1DP51172 638 aa6.21□□□□□ -1.42
SCFD1-213ENST00000554776 NFX1Q12986 1120 aaKnown RBP6.21□□□□□ -1.42
SCFD1-213ENST00000554776 ESCO1Q5FWF5 840 aa6.21□□□□□ -1.42
SCFD1-213ENST00000554776 LYSMD3Q7Z3D4 306 aa6.21□□□□□ -1.42
SCFD1-213ENST00000554776 CNKSR1Q969H4 720 aa6.21□□□□□ -1.42
SCFD1-213ENST00000554776 PPP1R12CQ9BZL4 782 aa6.21□□□□□ -1.42
SCFD1-213ENST00000554776 GRIP2Q9C0E4 1043 aa6.21□□□□□ -1.42
SCFD1-213ENST00000554776 TFIP11Q9UBB9 837 aaKnown RBP6.21□□□□□ -1.42
SCFD1-213ENST00000554776 MAFBQ9Y5Q3 323 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-213ENST00000554776 PALM3A6NDB9 673 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-213ENST00000554776 ARID3CA6NKF2 412 aa6.2□□□□□ -1.42
SCFD1-213ENST00000554776 GDF10P55107 478 aa6.2□□□□□ -1.42
SCFD1-213ENST00000554776 GTF2IP78347 998 aa6.2□□□□□ -1.42
SCFD1-213ENST00000554776 CENPCQ03188 943 aa6.2□□□□□ -1.42
SCFD1-213ENST00000554776 PTSQ03393 145 aa6.2□□□□□ -1.42
SCFD1-213ENST00000554776 LCE2AQ5TA79 106 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-213ENST00000554776 SLC35F4A4IF30 521 aa6.19□□□□□ -1.42
SCFD1-213ENST00000554776 H3BM21 787 aa6.19□□□□□ -1.42
SCFD1-213ENST00000554776 SUPT5HO00267 1087 aaKnown RBP6.19□□□□□ -1.42
SCFD1-213ENST00000554776 INHAP05111 366 aa6.19□□□□□ -1.42
SCFD1-213ENST00000554776 TREML4Q6UXN2 200 aa6.19□□□□□ -1.42
SCFD1-213ENST00000554776 TRIM50Q86XT4 487 aa6.19□□□□□ -1.42
SCFD1-213ENST00000554776 FHDC1Q9C0D6 1143 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-213ENST00000554776 SENP3-EIF4A1A0A087X0R7 540 aa6.18□□□□□ -1.42
SCFD1-213ENST00000554776 TMEM229AB2RXF0 380 aa6.18□□□□□ -1.42
SCFD1-213ENST00000554776 SPATA31C2B4DYI2 1134 aa6.18□□□□□ -1.42
SCFD1-213ENST00000554776 PPFIA3O75145 1194 aa6.18□□□□□ -1.42
SCFD1-213ENST00000554776 WFS1O76024 890 aa6.18□□□□□ -1.42
SCFD1-213ENST00000554776 SLC27A3Q5K4L6 730 aa6.18□□□□□ -1.42
SCFD1-213ENST00000554776 PRICKLE2Q7Z3G6 844 aa6.18□□□□□ -1.42
SCFD1-213ENST00000554776 ZBTB7BO15156 539 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-213ENST00000554776 VEGFBP49765 207 aa6.17□□□□□ -1.42
SCFD1-213ENST00000554776 ATP1A2P50993 1020 aa6.17□□□□□ -1.42
SCFD1-213ENST00000554776 CLDN10P78369 228 aa6.17□□□□□ -1.42
SCFD1-213ENST00000554776 CFAP70Q5T0N1 1121 aa6.17□□□□□ -1.42
SCFD1-213ENST00000554776 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
SCFD1-213ENST00000554776 CCDC155Q8N6L0 562 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms