RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 RAB3GAP1Q15042 981 aa15.32■□□□□ 0.04
HDAC7-230ENST00000552960 TBC1D9Q6ZT07 1266 aa15.32■□□□□ 0.04
HDAC7-230ENST00000552960 KIF16BQ96L93 1317 aa15.32■□□□□ 0.04
HDAC7-230ENST00000552960 K7ELQ4 463 aaPredicted RBP15.32■□□□□ 0.04
HDAC7-230ENST00000552960 RRP9O43818 475 aaKnown RBP15.32■□□□□ 0.04
HDAC7-230ENST00000552960 CT47B1P0C2W7 299 aaPredicted RBP15.32■□□□□ 0.04
HDAC7-230ENST00000552960 GAS2L2Q8NHY3 880 aa15.32■□□□□ 0.04
HDAC7-230ENST00000552960 XRN1Q8IZH2 1706 aaKnown RBP15.32■□□□□ 0.04
HDAC7-230ENST00000552960 MON2Q7Z3U7 1717 aa15.31■□□□□ 0.04
HDAC7-230ENST00000552960 SKOR2Q2VWA4 1001 aaPredicted RBP15.31■□□□□ 0.04
HDAC7-230ENST00000552960 SNX21Q969T3 373 aa15.31■□□□□ 0.04
HDAC7-230ENST00000552960 ORAI2Q96SN7 254 aa15.3■□□□□ 0.04
HDAC7-230ENST00000552960 MCTP1Q6DN14 999 aa15.3■□□□□ 0.04
HDAC7-230ENST00000552960 ESCO1Q5FWF5 840 aa15.3■□□□□ 0.04
HDAC7-230ENST00000552960 AKAP12Q02952 1782 aa15.3■□□□□ 0.04
HDAC7-230ENST00000552960 FAM83GA6ND36 823 aa15.29■□□□□ 0.04
HDAC7-230ENST00000552960 NLRP6P59044 892 aa15.29■□□□□ 0.04
HDAC7-230ENST00000552960 DCTN1Q14203 1278 aa15.29■□□□□ 0.04
HDAC7-230ENST00000552960 EIF4A2Q14240 407 aaKnown RBP15.29■□□□□ 0.04
HDAC7-230ENST00000552960 NPHP4O75161 1426 aaPredicted RBP15.29■□□□□ 0.04
HDAC7-230ENST00000552960 ITSN1Q15811 1721 aa15.29■□□□□ 0.04
HDAC7-230ENST00000552960 BMP2KLQ5H9B9 411 aa15.29■□□□□ 0.04
HDAC7-230ENST00000552960 FOXD4L5Q5VV16 416 aaPredicted RBP15.29■□□□□ 0.04
HDAC7-230ENST00000552960 FOXD4L4Q8WXT5 416 aaPredicted RBP15.29■□□□□ 0.04
HDAC7-230ENST00000552960 CIZ1Q9ULV3 898 aaPredicted RBP15.29■□□□□ 0.04
HDAC7-230ENST00000552960 TOPAZ1Q8N9V7 1692 aa15.29■□□□□ 0.04
HDAC7-230ENST00000552960 SSH2Q76I76 1423 aa15.28■□□□□ 0.04
HDAC7-230ENST00000552960 MSNP26038 577 aaKnown RBP15.28■□□□□ 0.04
HDAC7-230ENST00000552960 KIAA1211Q6ZU35 1233 aa15.28■□□□□ 0.04
HDAC7-230ENST00000552960 KIF2CQ99661 725 aa15.28■□□□□ 0.04
HDAC7-230ENST00000552960 LRRC7Q96NW7 1537 aa15.28■□□□□ 0.04
HDAC7-230ENST00000552960 CAVIN1Q6NZI2 390 aaKnown RBP15.28■□□□□ 0.04
HDAC7-230ENST00000552960 MAP3K19Q56UN5 1328 aa15.28■□□□□ 0.04
HDAC7-230ENST00000552960 SETD1BQ9UPS6 1966 aaKnown RBP15.28■□□□□ 0.04
HDAC7-230ENST00000552960 DDIT3P35638 169 aa15.28■□□□□ 0.04
HDAC7-230ENST00000552960 RBM10P98175 930 aaKnown RBP15.28■□□□□ 0.04
HDAC7-230ENST00000552960 ISY1Q9ULR0 285 aaKnown RBP15.28■□□□□ 0.04
HDAC7-230ENST00000552960 OVOS2A0A0J9YW53 1432 aa15.27■□□□□ 0.04
HDAC7-230ENST00000552960 OVOS2Q6IE36 1432 aa15.27■□□□□ 0.04
HDAC7-230ENST00000552960 FCHSD2O94868 740 aa15.26■□□□□ 0.03
HDAC7-230ENST00000552960 SULT6B1Q6IMI4 303 aa15.26■□□□□ 0.03
HDAC7-230ENST00000552960 TSPYL6Q8N831 410 aa15.26■□□□□ 0.03
HDAC7-230ENST00000552960 ABTB2Q8N961 1025 aa15.26■□□□□ 0.03
HDAC7-230ENST00000552960 FOXO3O43524 673 aa15.26■□□□□ 0.03
HDAC7-230ENST00000552960 DDX17Q92841 729 aaKnown RBP15.26■□□□□ 0.03
HDAC7-230ENST00000552960 NRKQ7Z2Y5 1582 aa15.26■□□□□ 0.03
HDAC7-230ENST00000552960 AATKQ6ZMQ8 1374 aa15.26■□□□□ 0.03
HDAC7-230ENST00000552960 ZNF142P52746 1687 aaPredicted RBP15.26■□□□□ 0.03
HDAC7-230ENST00000552960 BAG4O95429 457 aaKnown RBP15.26■□□□□ 0.03
HDAC7-230ENST00000552960 CALD1Q05682 793 aaKnown RBP15.26■□□□□ 0.03
HDAC7-230ENST00000552960 PHF8Q9UPP1 1060 aa15.25■□□□□ 0.03
HDAC7-230ENST00000552960 NALCNQ8IZF0 1738 aa15.25■□□□□ 0.03
HDAC7-230ENST00000552960 LTV1Q96GA3 475 aaPredicted RBP15.24■□□□□ 0.03
HDAC7-230ENST00000552960 PIK3R4Q99570 1358 aa15.24■□□□□ 0.03
HDAC7-230ENST00000552960 ZBTB7BO15156 539 aaPredicted RBP15.24■□□□□ 0.03
HDAC7-230ENST00000552960 CCDC173Q0VFZ6 552 aa15.24■□□□□ 0.03
HDAC7-230ENST00000552960 PROSER2Q86WR7 435 aaPredicted RBP15.24■□□□□ 0.03
HDAC7-230ENST00000552960 AK9Q5TCS8 1911 aa15.24■□□□□ 0.03
HDAC7-230ENST00000552960 CHD2O14647 1828 aaKnown RBP15.24■□□□□ 0.03
HDAC7-230ENST00000552960 GCC1Q96CN9 775 aa15.24■□□□□ 0.03
HDAC7-230ENST00000552960 PKP1Q13835 747 aa15.23■□□□□ 0.03
HDAC7-230ENST00000552960 LMOD2Q6P5Q4 547 aa15.23■□□□□ 0.03
HDAC7-230ENST00000552960 C16orf71Q8IYS4 520 aaPredicted RBP15.23■□□□□ 0.03
HDAC7-230ENST00000552960 CHAMP1Q96JM3 812 aa15.23■□□□□ 0.03
HDAC7-230ENST00000552960 PEAK1Q9H792 1746 aa15.23■□□□□ 0.03
HDAC7-230ENST00000552960 KDM4FA0A1W2PPD8 638 aa15.23■□□□□ 0.03
HDAC7-230ENST00000552960 TPRNQ4KMQ1 711 aa15.23■□□□□ 0.03
HDAC7-230ENST00000552960 CDC45O75419 566 aa15.22■□□□□ 0.03
HDAC7-230ENST00000552960 CDK12Q9NYV4 1490 aaPredicted RBP15.22■□□□□ 0.03
HDAC7-230ENST00000552960 PTMSP20962 102 aa15.22■□□□□ 0.03
HDAC7-230ENST00000552960 R3HCC1Q9Y3T6 440 aaKnown RBP15.22■□□□□ 0.03
HDAC7-230ENST00000552960 NCOA3Q9Y6Q9 1424 aa15.22■□□□□ 0.03
HDAC7-230ENST00000552960 PRPF40AO75400 957 aaKnown RBP15.22■□□□□ 0.03
HDAC7-230ENST00000552960 ZSCAN30Q86W11 494 aa15.22■□□□□ 0.03
HDAC7-230ENST00000552960 SIRT2Q8IXJ6 389 aa15.22■□□□□ 0.03
HDAC7-230ENST00000552960 FAM13BQ9NYF5 915 aa15.21■□□□□ 0.03
HDAC7-230ENST00000552960 AMPHP49418 695 aa15.21■□□□□ 0.03
HDAC7-230ENST00000552960 PSME1Q06323 249 aa15.21■□□□□ 0.03
HDAC7-230ENST00000552960 NFE2L2Q16236 605 aa15.21■□□□□ 0.03
HDAC7-230ENST00000552960 ALDH1L2Q3SY69 923 aa15.21■□□□□ 0.03
HDAC7-230ENST00000552960 RBM27Q9P2N5 1060 aaKnown RBP15.21■□□□□ 0.03
HDAC7-230ENST00000552960 KLHL40Q2TBA0 621 aa15.21■□□□□ 0.02
HDAC7-230ENST00000552960 FOXD4L6Q3SYB3 417 aaPredicted RBP15.2■□□□□ 0.02
HDAC7-230ENST00000552960 FOXD4L3Q6VB84 417 aaPredicted RBP15.2■□□□□ 0.02
HDAC7-230ENST00000552960 USHBP1Q8N6Y0 703 aa15.2■□□□□ 0.02
HDAC7-230ENST00000552960 PIK3C2AO00443 1686 aa15.2■□□□□ 0.02
HDAC7-230ENST00000552960 USP31Q70CQ4 1352 aa15.2■□□□□ 0.02
HDAC7-230ENST00000552960 IL16Q14005 1332 aa15.19■□□□□ 0.02
HDAC7-230ENST00000552960 VAMP4O75379 141 aa15.19■□□□□ 0.02
HDAC7-230ENST00000552960 NOL8Q76FK4 1167 aaKnown RBP15.19■□□□□ 0.02
HDAC7-230ENST00000552960 MCM10Q7L590 875 aa15.19■□□□□ 0.02
HDAC7-230ENST00000552960 TTC21AQ8NDW8 1320 aa15.19■□□□□ 0.02
HDAC7-230ENST00000552960 GSPT1P15170 499 aaKnown RBP15.19■□□□□ 0.02
HDAC7-230ENST00000552960 FMN2Q9NZ56 1722 aa15.19■□□□□ 0.02
HDAC7-230ENST00000552960 ADGRL3Q9HAR2 1447 aa15.19■□□□□ 0.02
HDAC7-230ENST00000552960 TPM2P07951 284 aa15.19■□□□□ 0.02
HDAC7-230ENST00000552960 ZGPATQ8N5A5 531 aaKnown RBP15.19■□□□□ 0.02
HDAC7-230ENST00000552960 OTUD7AQ8TE49 926 aaPredicted RBP15.19■□□□□ 0.02
HDAC7-230ENST00000552960 SMARCA5O60264 1052 aaPredicted RBP15.18■□□□□ 0.02
HDAC7-230ENST00000552960 TWISTNBQ3B726 338 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms