RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 MAP3K1Q13233 1512 aa8.71□□□□□ -1.01
SMARCC2-213ENST00000552627 TTC24A2A3L6 582 aaPredicted RBP8.71□□□□□ -1.02
SMARCC2-213ENST00000552627 ZNF511Q8NB15 262 aa8.71□□□□□ -1.02
SMARCC2-213ENST00000552627 LRRN4Q8WUT4 740 aa8.71□□□□□ -1.02
SMARCC2-213ENST00000552627 TOR4AQ9NXH8 423 aa8.71□□□□□ -1.02
SMARCC2-213ENST00000552627 CCNB3Q8WWL7 1395 aa8.71□□□□□ -1.02
SMARCC2-213ENST00000552627 SCAPERQ9BY12 1400 aa8.71□□□□□ -1.02
SMARCC2-213ENST00000552627 ARHGEF12Q9NZN5 1544 aa8.7□□□□□ -1.02
SMARCC2-213ENST00000552627 TMEM259Q4ZIN3 620 aa8.7□□□□□ -1.02
SMARCC2-213ENST00000552627 PKDCCQ504Y2 493 aa8.7□□□□□ -1.02
SMARCC2-213ENST00000552627 EFCAB2Q5VUJ9 269 aa8.7□□□□□ -1.02
SMARCC2-213ENST00000552627 EHBP1Q8NDI1 1231 aa8.7□□□□□ -1.02
SMARCC2-213ENST00000552627 ARMC2Q8NEN0 867 aa8.7□□□□□ -1.02
SMARCC2-213ENST00000552627 SNIP1Q8TAD8 396 aaKnown RBP8.7□□□□□ -1.02
SMARCC2-213ENST00000552627 ZNF777Q9ULD5 760 aaPredicted RBP8.7□□□□□ -1.02
SMARCC2-213ENST00000552627 PHLDB1Q86UU1 1377 aa8.7□□□□□ -1.02
SMARCC2-213ENST00000552627 POGZQ7Z3K3 1410 aa8.7□□□□□ -1.02
SMARCC2-213ENST00000552627 SYCP2Q9BX26 1530 aa8.7□□□□□ -1.02
SMARCC2-213ENST00000552627 FAM187AA6NFU0 413 aa8.69□□□□□ -1.02
SMARCC2-213ENST00000552627 DGAT1O75907 488 aa8.69□□□□□ -1.02
SMARCC2-213ENST00000552627 ZMYM4Q5VZL5 1548 aa8.69□□□□□ -1.02
SMARCC2-213ENST00000552627 SIGLEC1Q9BZZ2 1709 aa8.68□□□□□ -1.02
SMARCC2-213ENST00000552627 USP17L8P0C7I0 530 aa8.68□□□□□ -1.02
SMARCC2-213ENST00000552627 TRAF7Q6Q0C0 670 aa8.68□□□□□ -1.02
SMARCC2-213ENST00000552627 ZNF644Q9H582 1327 aaPredicted RBP8.68□□□□□ -1.02
SMARCC2-213ENST00000552627 YEATS2Q9ULM3 1422 aa8.68□□□□□ -1.02
SMARCC2-213ENST00000552627 TRAPPC8Q9Y2L5 1435 aa8.68□□□□□ -1.02
SMARCC2-213ENST00000552627 ARHGEF40Q8TER5 1519 aa8.68□□□□□ -1.02
SMARCC2-213ENST00000552627 ZFYVE16Q7Z3T8 1539 aa8.67□□□□□ -1.02
SMARCC2-213ENST00000552627 PPARGC1BQ86YN6 1023 aaKnown RBP8.67□□□□□ -1.02
SMARCC2-213ENST00000552627 CFDP1Q9UEE9 299 aaPredicted RBP8.67□□□□□ -1.02
SMARCC2-213ENST00000552627 KDM5CP41229 1560 aa8.66□□□□□ -1.02
SMARCC2-213ENST00000552627 HECW2Q9P2P5 1572 aa8.66□□□□□ -1.02
SMARCC2-213ENST00000552627 CAMSAP2Q08AD1 1489 aa8.66□□□□□ -1.02
SMARCC2-213ENST00000552627 VARSP26640 1264 aaKnown RBP8.66□□□□□ -1.02
SMARCC2-213ENST00000552627 AGERQ15109 404 aa8.66□□□□□ -1.02
SMARCC2-213ENST00000552627 NR6A1Q15406 480 aa8.66□□□□□ -1.02
SMARCC2-213ENST00000552627 NBPF14Q5TI25 921 aa8.66□□□□□ -1.02
SMARCC2-213ENST00000552627 AFAP1Q8N556 730 aa8.66□□□□□ -1.02
SMARCC2-213ENST00000552627 ABCA6Q8N139 1617 aa8.65□□□□□ -1.02
SMARCC2-213ENST00000552627 ZNF518AQ6AHZ1 1483 aa8.65□□□□□ -1.02
SMARCC2-213ENST00000552627 SIAH2O43255 324 aa8.65□□□□□ -1.02
SMARCC2-213ENST00000552627 HNRNPMP52272 730 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMARCC2-213ENST00000552627 BPHLQ86WA6 291 aaPredicted RBP8.65□□□□□ -1.02
SMARCC2-213ENST00000552627 FOXJ1Q92949 421 aa8.65□□□□□ -1.02
SMARCC2-213ENST00000552627 KIDINS220Q9ULH0 1771 aa8.64□□□□□ -1.03
SMARCC2-213ENST00000552627 J3QL48 77 aa8.64□□□□□ -1.03
SMARCC2-213ENST00000552627 ALDH1A1P00352 501 aa8.64□□□□□ -1.03
SMARCC2-213ENST00000552627 DIP2CQ9Y2E4 1556 aa8.64□□□□□ -1.03
SMARCC2-213ENST00000552627 MYOM3Q5VTT5 1437 aa8.63□□□□□ -1.03
SMARCC2-213ENST00000552627 SMPD1P17405 629 aa8.63□□□□□ -1.03
SMARCC2-213ENST00000552627 MYT1Q01538 1121 aa8.63□□□□□ -1.03
SMARCC2-213ENST00000552627 FAM174AQ8TBP5 190 aa8.63□□□□□ -1.03
SMARCC2-213ENST00000552627 GPKOWQ92917 476 aaPredicted RBP eCLIP8.63□□□□□ -1.03
SMARCC2-213ENST00000552627 HMX1Q9NP08 348 aaPredicted RBP8.63□□□□□ -1.03
SMARCC2-213ENST00000552627 FKBPLQ9UIM3 349 aa8.63□□□□□ -1.03
SMARCC2-213ENST00000552627 INO80Q9ULG1 1556 aaPredicted RBP8.63□□□□□ -1.03
SMARCC2-213ENST00000552627 PLEKHH2Q8IVE3 1493 aa8.63□□□□□ -1.03
SMARCC2-213ENST00000552627 PTPN23Q9H3S7 1636 aa8.62□□□□□ -1.03
SMARCC2-213ENST00000552627 LCE2BO14633 110 aa8.62□□□□□ -1.03
SMARCC2-213ENST00000552627 PNMA1Q8ND90 353 aa8.62□□□□□ -1.03
SMARCC2-213ENST00000552627 BANK1Q8NDB2 785 aa8.62□□□□□ -1.03
SMARCC2-213ENST00000552627 MBD5Q9P267 1494 aa8.62□□□□□ -1.03
SMARCC2-213ENST00000552627 KIAA1107Q9UPP5 1409 aa8.62□□□□□ -1.03
SMARCC2-213ENST00000552627 ATP7AQ04656 1500 aa8.61□□□□□ -1.03
SMARCC2-213ENST00000552627 EPS8L1Q8TE68 723 aa8.61□□□□□ -1.03
SMARCC2-213ENST00000552627 MAGI2Q86UL8 1455 aa8.61□□□□□ -1.03
SMARCC2-213ENST00000552627 MLH3Q9UHC1 1453 aa8.61□□□□□ -1.03
SMARCC2-213ENST00000552627 BCORL1Q5H9F3 1711 aa8.6□□□□□ -1.03
SMARCC2-213ENST00000552627 ARID4BQ4LE39 1312 aaPredicted RBP8.6□□□□□ -1.03
SMARCC2-213ENST00000552627 ZC3H4Q9UPT8 1303 aaKnown RBP8.6□□□□□ -1.03
SMARCC2-213ENST00000552627 ADGBQ8N7X0 1667 aa8.6□□□□□ -1.03
SMARCC2-213ENST00000552627 ATP10AO60312 1499 aa8.6□□□□□ -1.03
SMARCC2-213ENST00000552627 AVPP01185 164 aa8.6□□□□□ -1.03
SMARCC2-213ENST00000552627 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
SMARCC2-213ENST00000552627 PDXDC2PQ6P474 469 aa8.6□□□□□ -1.03
SMARCC2-213ENST00000552627 SH3BP5LQ7L8J4 393 aa8.6□□□□□ -1.03
SMARCC2-213ENST00000552627 SH3RF1Q7Z6J0 888 aa8.6□□□□□ -1.03
SMARCC2-213ENST00000552627 MPNDQ8N594 471 aa8.6□□□□□ -1.03
SMARCC2-213ENST00000552627 WASF2Q9Y6W5 498 aa8.6□□□□□ -1.03
SMARCC2-213ENST00000552627 MADDQ8WXG6 1647 aa8.6□□□□□ -1.03
SMARCC2-213ENST00000552627 FGD6Q6ZV73 1430 aa8.6□□□□□ -1.03
SMARCC2-213ENST00000552627 ARHGEF5Q12774 1597 aa8.6□□□□□ -1.03
SMARCC2-213ENST00000552627 CROCC2H7BZ55 1655 aa8.59□□□□□ -1.03
SMARCC2-213ENST00000552627 SPAG9O60271 1321 aaKnown RBP8.59□□□□□ -1.03
SMARCC2-213ENST00000552627 CCDC141Q6ZP82 1450 aa8.59□□□□□ -1.03
SMARCC2-213ENST00000552627 MAGEB6P1A0A0J9YX57 407 aa8.59□□□□□ -1.03
SMARCC2-213ENST00000552627 TLL2Q9Y6L7 1015 aa8.59□□□□□ -1.03
SMARCC2-213ENST00000552627 C9orf84Q5VXU9 1444 aa8.59□□□□□ -1.03
SMARCC2-213ENST00000552627 MIA2Q96PC5 1412 aa8.59□□□□□ -1.03
SMARCC2-213ENST00000552627 ADAMTSL3P82987 1691 aa8.59□□□□□ -1.03
SMARCC2-213ENST00000552627 MLECQ14165 292 aa8.58□□□□□ -1.04
SMARCC2-213ENST00000552627 ARID5BQ14865 1188 aa8.58□□□□□ -1.04
SMARCC2-213ENST00000552627 CTC1Q2NKJ3 1217 aa8.58□□□□□ -1.04
SMARCC2-213ENST00000552627 HPS1Q92902 700 aa8.58□□□□□ -1.04
SMARCC2-213ENST00000552627 TRIM34Q9BYJ4 488 aa8.58□□□□□ -1.04
SMARCC2-213ENST00000552627 AAASQ9NRG9 546 aa8.58□□□□□ -1.04
SMARCC2-213ENST00000552627 RIMS1Q86UR5 1692 aaKnown RBP8.58□□□□□ -1.04
SMARCC2-213ENST00000552627 PTK2Q05397 1052 aa8.57□□□□□ -1.04
SMARCC2-213ENST00000552627 CRIPAKQ8N1N5 446 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms