RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 NRXN1Q9ULB1 1477 aa10.36□□□□□ -0.75
CHPT1-208ENST00000552215 TRIM35Q9UPQ4 493 aa10.36□□□□□ -0.75
CHPT1-208ENST00000552215 ATP7BP35670 1465 aa10.36□□□□□ -0.75
CHPT1-208ENST00000552215 SBNO1A3KN83 1393 aa10.35□□□□□ -0.75
CHPT1-208ENST00000552215 PRAMEF22A3QJZ6 481 aa10.35□□□□□ -0.75
CHPT1-208ENST00000552215 SMIM5Q71RC9 77 aa10.35□□□□□ -0.75
CHPT1-208ENST00000552215 UBR1Q8IWV7 1749 aa10.35□□□□□ -0.75
CHPT1-208ENST00000552215 IQGAP1P46940 1657 aa10.35□□□□□ -0.75
CHPT1-208ENST00000552215 ZBTB3Q9H5J0 574 aa10.35□□□□□ -0.75
CHPT1-208ENST00000552215 POLR3AO14802 1390 aaPredicted RBP10.35□□□□□ -0.75
CHPT1-208ENST00000552215 IL17REQ8NFR9 667 aa10.35□□□□□ -0.75
CHPT1-208ENST00000552215 C9orf78Q9NZ63 289 aaPredicted RBP10.35□□□□□ -0.75
CHPT1-208ENST00000552215 DZIP1LQ8IYY4 767 aaKnown RBP10.34□□□□□ -0.75
CHPT1-208ENST00000552215 PPP4R2Q9NY27 417 aa10.34□□□□□ -0.75
CHPT1-208ENST00000552215 ARHGAP23Q9P227 1491 aa10.34□□□□□ -0.75
CHPT1-208ENST00000552215 ATP5J2-PTCD1G3V325 749 aa10.34□□□□□ -0.75
CHPT1-208ENST00000552215 GPTP24298 496 aa10.34□□□□□ -0.75
CHPT1-208ENST00000552215 AMOTQ4VCS5 1084 aa10.34□□□□□ -0.75
CHPT1-208ENST00000552215 ERBB3P21860 1342 aa10.33□□□□□ -0.76
CHPT1-208ENST00000552215 ARHGEF10O15013 1369 aa10.33□□□□□ -0.76
CHPT1-208ENST00000552215 NKTRP30414 1462 aaKnown RBP10.33□□□□□ -0.76
CHPT1-208ENST00000552215 WDR63Q8IWG1 891 aa10.33□□□□□ -0.76
CHPT1-208ENST00000552215 DIP2AQ14689 1571 aa10.32□□□□□ -0.76
CHPT1-208ENST00000552215 SLIT1O75093 1534 aa10.32□□□□□ -0.76
CHPT1-208ENST00000552215 CCDC24Q8N4L8 307 aa10.32□□□□□ -0.76
CHPT1-208ENST00000552215 PTCH1Q13635 1447 aa10.32□□□□□ -0.76
CHPT1-208ENST00000552215 CFAP44Q96MT7 982 aa10.32□□□□□ -0.76
CHPT1-208ENST00000552215 CHPF2Q9P2E5 772 aa10.32□□□□□ -0.76
CHPT1-208ENST00000552215 TAOK2Q9UL54 1235 aa10.32□□□□□ -0.76
CHPT1-208ENST00000552215 RARSP54136 660 aaKnown RBP10.31□□□□□ -0.76
CHPT1-208ENST00000552215 TBC1D2BQ9UPU7 963 aa10.31□□□□□ -0.76
CHPT1-208ENST00000552215 AFF2P51816 1311 aa10.31□□□□□ -0.76
CHPT1-208ENST00000552215 RNMTO43148 476 aaKnown RBP10.31□□□□□ -0.76
CHPT1-208ENST00000552215 CCDC30Q5VVM6 783 aa10.31□□□□□ -0.76
CHPT1-208ENST00000552215 G2E3Q7L622 706 aa10.31□□□□□ -0.76
CHPT1-208ENST00000552215 PHAXQ9H814 394 aaKnown RBP10.31□□□□□ -0.76
CHPT1-208ENST00000552215 ERICH6Q7L0X2 663 aa10.31□□□□□ -0.76
CHPT1-208ENST00000552215 ASAP1Q9ULH1 1129 aa10.31□□□□□ -0.76
CHPT1-208ENST00000552215 A1BGP04217 495 aa10.3□□□□□ -0.76
CHPT1-208ENST00000552215 TMEM57Q8N5G2 664 aa10.3□□□□□ -0.76
CHPT1-208ENST00000552215 KCNQ2O43526 872 aa10.3□□□□□ -0.76
CHPT1-208ENST00000552215 TAF7LQ5H9L4 462 aa10.3□□□□□ -0.76
CHPT1-208ENST00000552215 AKAP4Q5JQC9 854 aa10.3□□□□□ -0.76
CHPT1-208ENST00000552215 DAXXQ9UER7 740 aaPredicted RBP10.3□□□□□ -0.76
CHPT1-208ENST00000552215 CPSF1Q10570 1443 aaKnown RBP10.3□□□□□ -0.76
CHPT1-208ENST00000552215 ADAMTSL3P82987 1691 aa10.3□□□□□ -0.76
CHPT1-208ENST00000552215 SETBP1Q9Y6X0 1596 aa10.3□□□□□ -0.76
CHPT1-208ENST00000552215 ZNF496Q96IT1 587 aaPredicted RBP10.3□□□□□ -0.76
CHPT1-208ENST00000552215 PLEKHF1Q96S99 279 aa10.3□□□□□ -0.76
CHPT1-208ENST00000552215 ATP6V1AP38606 617 aa10.29□□□□□ -0.76
CHPT1-208ENST00000552215 SIL1Q9H173 461 aa10.29□□□□□ -0.76
CHPT1-208ENST00000552215 MST1RQ04912 1400 aa10.29□□□□□ -0.76
CHPT1-208ENST00000552215 CYP27B1O15528 508 aa10.29□□□□□ -0.76
CHPT1-208ENST00000552215 TRIM37O94972 964 aa10.29□□□□□ -0.76
CHPT1-208ENST00000552215 NEXNQ0ZGT2 675 aa10.29□□□□□ -0.76
CHPT1-208ENST00000552215 ANKRD45Q5TZF3 282 aa10.29□□□□□ -0.76
CHPT1-208ENST00000552215 IFT57Q9NWB7 429 aa10.29□□□□□ -0.76
CHPT1-208ENST00000552215 INSRP06213 1382 aa10.28□□□□□ -0.76
CHPT1-208ENST00000552215 SF3B2Q13435 895 aaKnown RBP10.28□□□□□ -0.76
CHPT1-208ENST00000552215 BCL11BQ9C0K0 894 aaPredicted RBP10.28□□□□□ -0.76
CHPT1-208ENST00000552215 PI4KAP2A4QPH2 592 aa10.28□□□□□ -0.76
CHPT1-208ENST00000552215 PI4KAP1Q8N8J0 262 aa10.28□□□□□ -0.76
CHPT1-208ENST00000552215 USP16Q9Y5T5 823 aa10.28□□□□□ -0.76
CHPT1-208ENST00000552215 HSP90AB1P08238 724 aaKnown RBP10.28□□□□□ -0.76
CHPT1-208ENST00000552215 TECPR2O15040 1411 aa10.28□□□□□ -0.76
CHPT1-208ENST00000552215 RLBP1P12271 317 aa10.27□□□□□ -0.76
CHPT1-208ENST00000552215 LRRC7Q96NW7 1537 aa10.27□□□□□ -0.76
CHPT1-208ENST00000552215 WDR17Q8IZU2 1322 aa10.27□□□□□ -0.77
CHPT1-208ENST00000552215 COPS6Q7L5N1 327 aa10.27□□□□□ -0.77
CHPT1-208ENST00000552215 DNAJC10Q8IXB1 793 aa10.27□□□□□ -0.77
CHPT1-208ENST00000552215 LNPKQ9C0E8 428 aa10.27□□□□□ -0.77
CHPT1-208ENST00000552215 ZNF219Q9P2Y4 722 aaPredicted RBP10.27□□□□□ -0.77
CHPT1-208ENST00000552215 NPC1L1Q9UHC9 1359 aa10.27□□□□□ -0.77
CHPT1-208ENST00000552215 TNS3Q68CZ2 1445 aa10.27□□□□□ -0.77
CHPT1-208ENST00000552215 ANKARQ7Z5J8 1434 aa10.27□□□□□ -0.77
CHPT1-208ENST00000552215 TRIM27P14373 513 aa10.27□□□□□ -0.77
CHPT1-208ENST00000552215 PHKG2P15735 406 aa10.27□□□□□ -0.77
CHPT1-208ENST00000552215 ATF7IPQ6VMQ6 1270 aa10.27□□□□□ -0.77
CHPT1-208ENST00000552215 MYD88Q99836 296 aa10.27□□□□□ -0.77
CHPT1-208ENST00000552215 SOS2Q07890 1332 aaPredicted RBP10.27□□□□□ -0.77
CHPT1-208ENST00000552215 SEPT12Q8IYM1 358 aa10.26□□□□□ -0.77
CHPT1-208ENST00000552215 FMNL2Q96PY5 1086 aa10.26□□□□□ -0.77
CHPT1-208ENST00000552215 CD163L1Q9NR16 1453 aa10.26□□□□□ -0.77
CHPT1-208ENST00000552215 MAP3K5Q99683 1374 aa10.26□□□□□ -0.77
CHPT1-208ENST00000552215 UNC5CLQ8IV45 518 aa10.26□□□□□ -0.77
CHPT1-208ENST00000552215 XAGE3Q8WTP9 111 aa10.26□□□□□ -0.77
CHPT1-208ENST00000552215 VAMP4O75379 141 aa10.26□□□□□ -0.77
CHPT1-208ENST00000552215 MS4A1P11836 297 aa10.26□□□□□ -0.77
CHPT1-208ENST00000552215 ZNF790Q6PG37 636 aa10.26□□□□□ -0.77
CHPT1-208ENST00000552215 DCAF5Q96JK2 942 aa10.26□□□□□ -0.77
CHPT1-208ENST00000552215 IGSF1Q8N6C5 1336 aa10.25□□□□□ -0.77
CHPT1-208ENST00000552215 DDX58O95786 925 aaKnown RBP10.25□□□□□ -0.77
CHPT1-208ENST00000552215 FLIIQ13045 1269 aa10.25□□□□□ -0.77
CHPT1-208ENST00000552215 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.25□□□□□ -0.77
CHPT1-208ENST00000552215 CWF19L2Q2TBE0 894 aaKnown RBP10.25□□□□□ -0.77
CHPT1-208ENST00000552215 API5Q9BZZ5 524 aaKnown RBP10.25□□□□□ -0.77
CHPT1-208ENST00000552215 ARHGEF28Q8N1W1 1705 aaKnown RBP10.25□□□□□ -0.77
CHPT1-208ENST00000552215 PROSER3Q2NL68 480 aa10.24□□□□□ -0.77
CHPT1-208ENST00000552215 CARD10Q9BWT7 1032 aa10.24□□□□□ -0.77
CHPT1-208ENST00000552215 MAP3K2Q9Y2U5 619 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms