RNA–Protein interactions for RNA: ENST00000549832.1

ERBB3-213, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2 BASIC

Gene ERBB3, Length 3,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-213ENST00000549832 MTMR7Q9Y216 660 aa10.73□□□□□ -0.69
ERBB3-213ENST00000549832 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.73□□□□□ -0.69
ERBB3-213ENST00000549832 C8orf34Q49A92 452 aa10.72□□□□□ -0.69
ERBB3-213ENST00000549832 ADAMTS13Q76LX8 1427 aa10.72□□□□□ -0.69
ERBB3-213ENST00000549832 FMN2Q9NZ56 1722 aa10.72□□□□□ -0.69
ERBB3-213ENST00000549832 TMCO4Q5TGY1 634 aa10.72□□□□□ -0.69
ERBB3-213ENST00000549832 ZNF526Q8TF50 670 aaPredicted RBP10.72□□□□□ -0.69
ERBB3-213ENST00000549832 MARF1Q9Y4F3 1742 aaKnown RBP10.72□□□□□ -0.69
ERBB3-213ENST00000549832 HDGFP51858 240 aaKnown RBP10.71□□□□□ -0.69
ERBB3-213ENST00000549832 NALCNQ8IZF0 1738 aa10.71□□□□□ -0.69
ERBB3-213ENST00000549832 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.71□□□□□ -0.7
ERBB3-213ENST00000549832 MFAP1P55081 439 aaKnown RBP10.71□□□□□ -0.7
ERBB3-213ENST00000549832 CERKQ8TCT0 537 aa10.71□□□□□ -0.7
ERBB3-213ENST00000549832 KIF3BO15066 747 aa10.7□□□□□ -0.7
ERBB3-213ENST00000549832 RBM25P49756 843 aaKnown RBP10.7□□□□□ -0.7
ERBB3-213ENST00000549832 DUSP27Q5VZP5 1158 aa10.7□□□□□ -0.7
ERBB3-213ENST00000549832 CCDC144AA2RUR9 1427 aa10.7□□□□□ -0.7
ERBB3-213ENST00000549832 RIMS2Q9UQ26 1411 aa10.7□□□□□ -0.7
ERBB3-213ENST00000549832 TOPAZ1Q8N9V7 1692 aa10.7□□□□□ -0.7
ERBB3-213ENST00000549832 NUTM2FA1L443 756 aa10.69□□□□□ -0.7
ERBB3-213ENST00000549832 TTLL12Q14166 644 aaPredicted RBP10.69□□□□□ -0.7
ERBB3-213ENST00000549832 ITSN1Q15811 1721 aa10.69□□□□□ -0.7
ERBB3-213ENST00000549832 TRMT2AQ8IZ69 625 aaKnown RBP10.69□□□□□ -0.7
ERBB3-213ENST00000549832 COL16A1Q07092 1604 aaPredicted RBP10.69□□□□□ -0.7
ERBB3-213ENST00000549832 PPM1GO15355 546 aaPredicted RBP10.69□□□□□ -0.7
ERBB3-213ENST00000549832 ANKLE2Q86XL3 938 aa10.68□□□□□ -0.7
ERBB3-213ENST00000549832 RBM10P98175 930 aaKnown RBP10.68□□□□□ -0.7
ERBB3-213ENST00000549832 PANK3Q9H999 370 aa10.68□□□□□ -0.7
ERBB3-213ENST00000549832 MED1Q15648 1581 aaPredicted RBP10.68□□□□□ -0.7
ERBB3-213ENST00000549832 NFKBIBQ15653 356 aa10.68□□□□□ -0.7
ERBB3-213ENST00000549832 TBX22Q9Y458 520 aa10.68□□□□□ -0.7
ERBB3-213ENST00000549832 USP19O94966 1318 aa10.67□□□□□ -0.7
ERBB3-213ENST00000549832 PRIM1P49642 420 aaKnown RBP10.67□□□□□ -0.7
ERBB3-213ENST00000549832 KCNA1Q09470 495 aa10.67□□□□□ -0.7
ERBB3-213ENST00000549832 ADAMTS8Q9UP79 889 aa10.67□□□□□ -0.7
ERBB3-213ENST00000549832 PIK3C2GO75747 1445 aa10.66□□□□□ -0.7
ERBB3-213ENST00000549832 CRYBG1Q9Y4K1 1723 aa10.66□□□□□ -0.7
ERBB3-213ENST00000549832 CLCN1P35523 988 aa10.66□□□□□ -0.7
ERBB3-213ENST00000549832 CC2D1BQ5T0F9 858 aaKnown RBP10.66□□□□□ -0.7
ERBB3-213ENST00000549832 CERS3Q8IU89 383 aa10.65□□□□□ -0.7
ERBB3-213ENST00000549832 TMEM121BQ9BXQ6 578 aaPredicted RBP10.65□□□□□ -0.7
ERBB3-213ENST00000549832 AMOTL2Q9Y2J4 779 aa10.65□□□□□ -0.7
ERBB3-213ENST00000549832 ASXL1Q8IXJ9 1541 aa10.65□□□□□ -0.71
ERBB3-213ENST00000549832 CENPQQ7L2Z9 268 aaPredicted RBP10.64□□□□□ -0.71
ERBB3-213ENST00000549832 AEBP1Q8IUX7 1158 aa10.64□□□□□ -0.71
ERBB3-213ENST00000549832 GZF1Q9H116 711 aaPredicted RBP10.64□□□□□ -0.71
ERBB3-213ENST00000549832 GPCPD1Q9NPB8 672 aa10.64□□□□□ -0.71
ERBB3-213ENST00000549832 SLC4A3P48751 1232 aa10.64□□□□□ -0.71
ERBB3-213ENST00000549832 ABCC6O95255 1503 aa10.64□□□□□ -0.71
ERBB3-213ENST00000549832 FXR2P51116 673 aaKnown RBP eCLIP10.64□□□□□ -0.713e-7■□□□□ 11.1
ERBB3-213ENST00000549832 TICAM2Q86XR7 235 aa10.64□□□□□ -0.71
ERBB3-213ENST00000549832 ROBO1Q9Y6N7 1651 aa10.64□□□□□ -0.71
ERBB3-213ENST00000549832 EIF3AQ14152 1382 aaKnown RBP10.64□□□□□ -0.71
ERBB3-213ENST00000549832 PPP2R1AP30153 589 aa10.63□□□□□ -0.71
ERBB3-213ENST00000549832 PPP2R2DQ66LE6 453 aa10.63□□□□□ -0.71
ERBB3-213ENST00000549832 ADGRB1O14514 1584 aa10.63□□□□□ -0.71
ERBB3-213ENST00000549832 FRAT1Q92837 279 aaPredicted RBP10.63□□□□□ -0.71
ERBB3-213ENST00000549832 CDK12Q9NYV4 1490 aaPredicted RBP10.63□□□□□ -0.71
ERBB3-213ENST00000549832 GRXCR2A6NFK2 248 aa10.62□□□□□ -0.71
ERBB3-213ENST00000549832 TUSC1Q2TAM9 212 aa10.62□□□□□ -0.71
ERBB3-213ENST00000549832 NPC1L1Q9UHC9 1359 aa10.62□□□□□ -0.71
ERBB3-213ENST00000549832 ARHGEF28Q8N1W1 1705 aaKnown RBP10.62□□□□□ -0.71
ERBB3-213ENST00000549832 KCNA6P17658 529 aa10.62□□□□□ -0.71
ERBB3-213ENST00000549832 FAM161AQ3B820 660 aa10.62□□□□□ -0.71
ERBB3-213ENST00000549832 PHLPP1O60346 1717 aa10.62□□□□□ -0.71
ERBB3-213ENST00000549832 SLFN5Q08AF3 891 aa10.62□□□□□ -0.71
ERBB3-213ENST00000549832 ABCA3Q99758 1704 aa10.62□□□□□ -0.71
ERBB3-213ENST00000549832 TMEM106CQ9BVX2 250 aa10.61□□□□□ -0.71
ERBB3-213ENST00000549832 PLPP6Q8IY26 295 aa10.6□□□□□ -0.71
ERBB3-213ENST00000549832 MICALL2Q8IY33 904 aa10.6□□□□□ -0.71
ERBB3-213ENST00000549832 PROCA1Q8NCQ7 364 aaPredicted RBP10.6□□□□□ -0.71
ERBB3-213ENST00000549832 NWD2Q9ULI1 1742 aa10.6□□□□□ -0.71
ERBB3-213ENST00000549832 ADGRL3Q9HAR2 1447 aa10.6□□□□□ -0.71
ERBB3-213ENST00000549832 FAM177A1Q8N128 213 aaPredicted RBP10.59□□□□□ -0.71
ERBB3-213ENST00000549832 NPDC1Q9NQX5 325 aaPredicted RBP10.59□□□□□ -0.71
ERBB3-213ENST00000549832 USTQ9Y2C2 406 aa10.59□□□□□ -0.71
ERBB3-213ENST00000549832 ANKARQ7Z5J8 1434 aa10.59□□□□□ -0.71
ERBB3-213ENST00000549832 TRPM3Q9HCF6 1732 aaPredicted RBP10.59□□□□□ -0.71
ERBB3-213ENST00000549832 TBC1D12O60347 775 aa10.59□□□□□ -0.71
ERBB3-213ENST00000549832 BRD1O95696 1058 aa10.59□□□□□ -0.71
ERBB3-213ENST00000549832 RGL3Q3MIN7 710 aa10.59□□□□□ -0.71
ERBB3-213ENST00000549832 CNPY4Q8N129 248 aa10.59□□□□□ -0.71
ERBB3-213ENST00000549832 TMF1P82094 1093 aa10.59□□□□□ -0.71
ERBB3-213ENST00000549832 TMC2Q8TDI7 906 aa10.59□□□□□ -0.71
ERBB3-213ENST00000549832 FAM217BQ9NTX9 383 aaPredicted RBP10.59□□□□□ -0.71
ERBB3-213ENST00000549832 SSTR3P32745 418 aaPredicted RBP10.58□□□□□ -0.72
ERBB3-213ENST00000549832 GOLGA2Q08379 1002 aa10.58□□□□□ -0.72
ERBB3-213ENST00000549832 PHOX2BQ99453 314 aa10.58□□□□□ -0.72
ERBB3-213ENST00000549832 PSMD1Q99460 953 aa10.58□□□□□ -0.72
ERBB3-213ENST00000549832 TMEM259Q4ZIN3 620 aa10.58□□□□□ -0.72
ERBB3-213ENST00000549832 ZNF330Q9Y3S2 320 aaPredicted RBP10.58□□□□□ -0.72
ERBB3-213ENST00000549832 FRAT2O75474 233 aaPredicted RBP10.57□□□□□ -0.72
ERBB3-213ENST00000549832 SRPK2P78362 688 aaKnown RBP10.57□□□□□ -0.72
ERBB3-213ENST00000549832 EID1Q9Y6B2 187 aa10.57□□□□□ -0.72
ERBB3-213ENST00000549832 IGHDP01880 384 aa10.57□□□□□ -0.72
ERBB3-213ENST00000549832 PRKAR2AP13861 404 aaKnown RBP10.56□□□□□ -0.72
ERBB3-213ENST00000549832 MAP3K9P80192 1104 aa10.56□□□□□ -0.72
ERBB3-213ENST00000549832 MYSM1Q5VVJ2 828 aa10.56□□□□□ -0.72
ERBB3-213ENST00000549832 GGT6Q6P531 493 aa10.56□□□□□ -0.72
ERBB3-213ENST00000549832 PRDM16Q9HAZ2 1276 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms