RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 ATF7IPQ6VMQ6 1270 aa14.43□□□□□ -0.1
DDB1-224ENST00000545894 ITPRIPQ8IWB1 547 aa14.43□□□□□ -0.1
DDB1-224ENST00000545894 SPRYD3Q8NCJ5 442 aa14.43□□□□□ -0.1
DDB1-224ENST00000545894 SSH1Q8WYL5 1049 aa14.43□□□□□ -0.1
DDB1-224ENST00000545894 SMC5Q8IY18 1101 aa14.43□□□□□ -0.1
DDB1-224ENST00000545894 IL16Q14005 1332 aa14.42□□□□□ -0.1
DDB1-224ENST00000545894 KIF20BQ96Q89 1820 aa14.42□□□□□ -0.1
DDB1-224ENST00000545894 U2SURPO15042 1029 aaKnown RBP14.42□□□□□ -0.1
DDB1-224ENST00000545894 FBLN1P23142 703 aa14.42□□□□□ -0.1
DDB1-224ENST00000545894 TRIM35Q9UPQ4 493 aa14.42□□□□□ -0.1
DDB1-224ENST00000545894 MED1Q15648 1581 aaPredicted RBP14.42□□□□□ -0.1
DDB1-224ENST00000545894 GOLGA6L3A6NEY3 463 aa14.41□□□□□ -0.1
DDB1-224ENST00000545894 JCADQ9P266 1359 aa14.41□□□□□ -0.1
DDB1-224ENST00000545894 FSD2A1L4K1 749 aa14.41□□□□□ -0.1
DDB1-224ENST00000545894 MARF1Q9Y4F3 1742 aaKnown RBP14.41□□□□□ -0.1
DDB1-224ENST00000545894 SOX12O15370 315 aa14.4□□□□□ -0.1
DDB1-224ENST00000545894 NOB1Q9ULX3 412 aaKnown RBP14.4□□□□□ -0.1
DDB1-224ENST00000545894 COL3A1P02461 1466 aaPredicted RBP14.4□□□□□ -0.1
DDB1-224ENST00000545894 GCP02774 474 aa14.4□□□□□ -0.1
DDB1-224ENST00000545894 HSCBQ8IWL3 235 aa14.4□□□□□ -0.1
DDB1-224ENST00000545894 USP54Q70EL1 1684 aa14.39□□□□□ -0.11
DDB1-224ENST00000545894 EIF5BO60841 1220 aaKnown RBP14.39□□□□□ -0.11
DDB1-224ENST00000545894 SLIT3O75094 1523 aa14.39□□□□□ -0.11
DDB1-224ENST00000545894 KIF16BQ96L93 1317 aa14.39□□□□□ -0.11
DDB1-224ENST00000545894 XRCC6P12956 609 aaKnown RBP eCLIP14.39□□□□□ -0.114e-7■□□□□ 8.4
DDB1-224ENST00000545894 TMEM57Q8N5G2 664 aa14.39□□□□□ -0.11
DDB1-224ENST00000545894 ZBTB40Q9NUA8 1239 aa14.39□□□□□ -0.11
DDB1-224ENST00000545894 COL22A1Q8NFW1 1626 aaPredicted RBP14.38□□□□□ -0.11
DDB1-224ENST00000545894 IPO8O15397 1037 aaKnown RBP14.38□□□□□ -0.11
DDB1-224ENST00000545894 RRAGDQ9NQL2 400 aaPredicted RBP14.38□□□□□ -0.11
DDB1-224ENST00000545894 TRAK2O60296 914 aa14.38□□□□□ -0.11
DDB1-224ENST00000545894 CRYBG1Q9Y4K1 1723 aa14.37□□□□□ -0.11
DDB1-224ENST00000545894 NUTM2BA6NNL0 878 aaPredicted RBP14.37□□□□□ -0.11
DDB1-224ENST00000545894 NUTM2EB1AL46 878 aaPredicted RBP14.37□□□□□ -0.11
DDB1-224ENST00000545894 NUTM2AQ8IVF1 878 aaPredicted RBP14.37□□□□□ -0.11
DDB1-224ENST00000545894 KCNH5Q8NCM2 988 aa14.37□□□□□ -0.11
DDB1-224ENST00000545894 ANKRD26Q9UPS8 1709 aa14.37□□□□□ -0.11
DDB1-224ENST00000545894 RIPK4P57078 832 aa14.36□□□□□ -0.11
DDB1-224ENST00000545894 ZC3H6P61129 1189 aaKnown RBP14.36□□□□□ -0.11
DDB1-224ENST00000545894 NUCB1Q02818 461 aa14.36□□□□□ -0.11
DDB1-224ENST00000545894 GZF1Q9H116 711 aaPredicted RBP14.36□□□□□ -0.11
DDB1-224ENST00000545894 DDX11L8A8MPP1 907 aa14.36□□□□□ -0.11
DDB1-224ENST00000545894 RBM25P49756 843 aaKnown RBP14.36□□□□□ -0.11
DDB1-224ENST00000545894 HAP1P54257 671 aaPredicted RBP14.36□□□□□ -0.11
DDB1-224ENST00000545894 RRS1Q15050 365 aaKnown RBP14.36□□□□□ -0.11
DDB1-224ENST00000545894 PNNQ9H307 717 aaKnown RBP14.36□□□□□ -0.11
DDB1-224ENST00000545894 PHRF1Q9P1Y6 1649 aaKnown RBP14.36□□□□□ -0.11
DDB1-224ENST00000545894 NFAT5O94916 1531 aa14.36□□□□□ -0.11
DDB1-224ENST00000545894 ALDH1L2Q3SY69 923 aa14.35□□□□□ -0.11
DDB1-224ENST00000545894 ARXQ96QS3 562 aa14.35□□□□□ -0.11
DDB1-224ENST00000545894 AATKQ6ZMQ8 1374 aa14.35□□□□□ -0.11
DDB1-224ENST00000545894 SNX21Q969T3 373 aa14.35□□□□□ -0.11
DDB1-224ENST00000545894 POLKQ9UBT6 870 aa14.35□□□□□ -0.11
DDB1-224ENST00000545894 SPATA31A6Q5VVP1 1343 aa14.35□□□□□ -0.11
DDB1-224ENST00000545894 ILDR1Q86SU0 546 aaPredicted RBP14.34□□□□□ -0.11
DDB1-224ENST00000545894 ARHGEF25Q86VW2 580 aa14.34□□□□□ -0.11
DDB1-224ENST00000545894 ABCA3Q99758 1704 aa14.34□□□□□ -0.11
DDB1-224ENST00000545894 ZBTB7CA1YPR0 619 aa14.34□□□□□ -0.11
DDB1-224ENST00000545894 DIAPH1O60610 1272 aaKnown RBP14.34□□□□□ -0.11
DDB1-224ENST00000545894 DDIT3P35638 169 aa14.34□□□□□ -0.11
DDB1-224ENST00000545894 EMILIN1Q9Y6C2 1016 aa14.34□□□□□ -0.11
DDB1-224ENST00000545894 MAP3K19Q56UN5 1328 aa14.33□□□□□ -0.11
DDB1-224ENST00000545894 KIAA0232Q92628 1395 aa14.33□□□□□ -0.11
DDB1-224ENST00000545894 ADAMTS2O95450 1211 aa14.33□□□□□ -0.12
DDB1-224ENST00000545894 MRE11P49959 708 aa14.33□□□□□ -0.12
DDB1-224ENST00000545894 CHD1LQ86WJ1 897 aa14.33□□□□□ -0.12
DDB1-224ENST00000545894 LNPKQ9C0E8 428 aa14.32□□□□□ -0.12
DDB1-224ENST00000545894 FAM83GA6ND36 823 aa14.32□□□□□ -0.12
DDB1-224ENST00000545894 CHRNA2Q15822 529 aa14.32□□□□□ -0.12
DDB1-224ENST00000545894 PANK2Q9BZ23 570 aa14.32□□□□□ -0.12
DDB1-224ENST00000545894 LRP6O75581 1613 aa14.32□□□□□ -0.12
DDB1-224ENST00000545894 CPDO75976 1380 aa14.32□□□□□ -0.12
DDB1-224ENST00000545894 ZNF428Q96B54 188 aa14.31□□□□□ -0.12
DDB1-224ENST00000545894 ISY1Q9ULR0 285 aaKnown RBP14.31□□□□□ -0.12
DDB1-224ENST00000545894 BRPF1P55201 1214 aaPredicted RBP14.31□□□□□ -0.12
DDB1-224ENST00000545894 BMP2KLQ5H9B9 411 aa14.31□□□□□ -0.12
DDB1-224ENST00000545894 CIZ1Q9ULV3 898 aaPredicted RBP14.31□□□□□ -0.12
DDB1-224ENST00000545894 PRDM11Q9NQV5 511 aa14.3□□□□□ -0.12
DDB1-224ENST00000545894 FCHSD2O94868 740 aa14.3□□□□□ -0.12
DDB1-224ENST00000545894 AMPHP49418 695 aa14.3□□□□□ -0.12
DDB1-224ENST00000545894 CHMP4BQ9H444 224 aaKnown RBP14.3□□□□□ -0.12
DDB1-224ENST00000545894 HSP90AB1P08238 724 aaKnown RBP14.29□□□□□ -0.12
DDB1-224ENST00000545894 AXIN2Q9Y2T1 843 aa14.29□□□□□ -0.12
DDB1-224ENST00000545894 HOXC9P31274 260 aa14.29□□□□□ -0.12
DDB1-224ENST00000545894 IP6K1Q92551 441 aa14.29□□□□□ -0.12
DDB1-224ENST00000545894 GCC1Q96CN9 775 aa14.29□□□□□ -0.12
DDB1-224ENST00000545894 GRPEL1Q9HAV7 217 aa14.29□□□□□ -0.12
DDB1-224ENST00000545894 CLCN1P35523 988 aa14.28□□□□□ -0.12
DDB1-224ENST00000545894 HSP90AB2PQ58FF8 381 aa14.28□□□□□ -0.12
DDB1-224ENST00000545894 TNPO1Q92973 898 aaKnown RBP14.28□□□□□ -0.12
DDB1-224ENST00000545894 GBP4Q96PP9 640 aa14.28□□□□□ -0.12
DDB1-224ENST00000545894 PEAK1Q9H792 1746 aa14.28□□□□□ -0.12
DDB1-224ENST00000545894 ZBTB7BO15156 539 aaPredicted RBP14.27□□□□□ -0.13
DDB1-224ENST00000545894 ANKRD45Q5TZF3 282 aa14.27□□□□□ -0.13
DDB1-224ENST00000545894 ARHGAP45Q92619 1136 aa14.27□□□□□ -0.13
DDB1-224ENST00000545894 C8orf37Q96NL8 207 aa14.27□□□□□ -0.13
DDB1-224ENST00000545894 MAP2P11137 1827 aaKnown RBP14.26□□□□□ -0.13
DDB1-224ENST00000545894 PRKAR2BP31323 418 aa14.26□□□□□ -0.13
DDB1-224ENST00000545894 RAB3GAP1Q15042 981 aa14.26□□□□□ -0.13
DDB1-224ENST00000545894 MEX3CQ5U5Q3 659 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms