RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 FAM13BQ9NYF5 915 aa12.13□□□□□ -0.47
DDX11-229ENST00000545668 SSH2Q76I76 1423 aa12.13□□□□□ -0.47
DDX11-229ENST00000545668 TOPAZ1Q8N9V7 1692 aa12.13□□□□□ -0.47
DDX11-229ENST00000545668 TPRNQ4KMQ1 711 aa12.13□□□□□ -0.47
DDX11-229ENST00000545668 FLT4P35916 1363 aa12.12□□□□□ -0.47
DDX11-229ENST00000545668 TBC1D2Q9BYX2 928 aa12.12□□□□□ -0.47
DDX11-229ENST00000545668 MRPL50Q8N5N7 158 aaKnown RBP12.12□□□□□ -0.47
DDX11-229ENST00000545668 RTF1Q92541 710 aaKnown RBP12.12□□□□□ -0.47
DDX11-229ENST00000545668 SBNO1A3KN83 1393 aa12.11□□□□□ -0.47
DDX11-229ENST00000545668 NRKQ7Z2Y5 1582 aa12.11□□□□□ -0.47
DDX11-229ENST00000545668 ANKRD45Q5TZF3 282 aa12.11□□□□□ -0.47
DDX11-229ENST00000545668 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
DDX11-229ENST00000545668 RIMS1Q86UR5 1692 aaKnown RBP12.11□□□□□ -0.47
DDX11-229ENST00000545668 LTV1Q96GA3 475 aaPredicted RBP12.11□□□□□ -0.47
DDX11-229ENST00000545668 C1orf115Q9H7X2 142 aa12.11□□□□□ -0.47
DDX11-229ENST00000545668 ZBTB40Q9NUA8 1239 aa12.11□□□□□ -0.47
DDX11-229ENST00000545668 ANKARQ7Z5J8 1434 aa12.11□□□□□ -0.47
DDX11-229ENST00000545668 BRPF1P55201 1214 aaPredicted RBP12.1□□□□□ -0.47
DDX11-229ENST00000545668 ESCO1Q5FWF5 840 aa12.1□□□□□ -0.47
DDX11-229ENST00000545668 CHMP4BQ9H444 224 aaKnown RBP12.1□□□□□ -0.47
DDX11-229ENST00000545668 PDE4CQ08493 712 aa12.1□□□□□ -0.47
DDX11-229ENST00000545668 HDAC1Q13547 482 aaPredicted RBP12.1□□□□□ -0.47
DDX11-229ENST00000545668 FAM43AQ8N2R8 423 aa12.1□□□□□ -0.47
DDX11-229ENST00000545668 ARHGAP45Q92619 1136 aa12.1□□□□□ -0.47
DDX11-229ENST00000545668 EYA1Q99502 592 aa12.1□□□□□ -0.47
DDX11-229ENST00000545668 HAP1P54257 671 aaPredicted RBP12.09□□□□□ -0.47
DDX11-229ENST00000545668 PSME1Q06323 249 aa12.09□□□□□ -0.47
DDX11-229ENST00000545668 FOXO3O43524 673 aa12.09□□□□□ -0.47
DDX11-229ENST00000545668 MTHFSDQ2M296 383 aaKnown RBP12.09□□□□□ -0.47
DDX11-229ENST00000545668 PRDM10Q9NQV6 1147 aa12.08□□□□□ -0.47
DDX11-229ENST00000545668 ARHGEF10O15013 1369 aa12.08□□□□□ -0.48
DDX11-229ENST00000545668 XRN1Q8IZH2 1706 aaKnown RBP12.08□□□□□ -0.48
DDX11-229ENST00000545668 RGPD8O14715 1765 aaPredicted RBP12.08□□□□□ -0.48
DDX11-229ENST00000545668 KRT24Q2M2I5 525 aa12.08□□□□□ -0.48
DDX11-229ENST00000545668 API5Q9BZZ5 524 aaKnown RBP12.08□□□□□ -0.48
DDX11-229ENST00000545668 CHL1O00533 1208 aa12.08□□□□□ -0.48
DDX11-229ENST00000545668 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
DDX11-229ENST00000545668 HOXC9P31274 260 aa12.07□□□□□ -0.48
DDX11-229ENST00000545668 ANP32BQ92688 251 aaKnown RBP12.07□□□□□ -0.48
DDX11-229ENST00000545668 TRAK2O60296 914 aa12.07□□□□□ -0.48
DDX11-229ENST00000545668 GAS2L2Q8NHY3 880 aa12.07□□□□□ -0.48
DDX11-229ENST00000545668 ZHX1Q9UKY1 873 aaPredicted RBP12.07□□□□□ -0.48
DDX11-229ENST00000545668 PEAK1Q9H792 1746 aa12.07□□□□□ -0.48
DDX11-229ENST00000545668 CHMP5Q9NZZ3 219 aa12.06□□□□□ -0.48
DDX11-229ENST00000545668 ZBTB7BO15156 539 aaPredicted RBP12.06□□□□□ -0.48
DDX11-229ENST00000545668 TSPYL4Q9UJ04 414 aa12.06□□□□□ -0.48
DDX11-229ENST00000545668 LMOD2Q6P5Q4 547 aa12.06□□□□□ -0.48
DDX11-229ENST00000545668 IGSF1Q8N6C5 1336 aa12.06□□□□□ -0.48
DDX11-229ENST00000545668 PANK2Q9BZ23 570 aa12.06□□□□□ -0.48
DDX11-229ENST00000545668 DLG5Q8TDM6 1919 aa12.06□□□□□ -0.48
DDX11-229ENST00000545668 MCM4P33991 863 aa12.05□□□□□ -0.48
DDX11-229ENST00000545668 SMC5Q8IY18 1101 aa12.05□□□□□ -0.48
DDX11-229ENST00000545668 RRAGDQ9NQL2 400 aaPredicted RBP12.05□□□□□ -0.48
DDX11-229ENST00000545668 NALCNQ8IZF0 1738 aa12.05□□□□□ -0.48
DDX11-229ENST00000545668 AEBP2Q6ZN18 517 aaPredicted RBP12.05□□□□□ -0.48
DDX11-229ENST00000545668 TBC1D32Q96NH3 1257 aa12.05□□□□□ -0.48
DDX11-229ENST00000545668 FOXD4L5Q5VV16 416 aaPredicted RBP12.04□□□□□ -0.48
DDX11-229ENST00000545668 FOXD4L4Q8WXT5 416 aaPredicted RBP12.04□□□□□ -0.48
DDX11-229ENST00000545668 ABCC4O15439 1325 aa12.04□□□□□ -0.48
DDX11-229ENST00000545668 XPCQ01831 940 aaPredicted RBP12.04□□□□□ -0.48
DDX11-229ENST00000545668 NPHP4O75161 1426 aaPredicted RBP12.03□□□□□ -0.48
DDX11-229ENST00000545668 KDRP35968 1356 aa12.03□□□□□ -0.48
DDX11-229ENST00000545668 PIK3C2AO00443 1686 aa12.03□□□□□ -0.48
DDX11-229ENST00000545668 USHBP1Q8N6Y0 703 aa12.03□□□□□ -0.48
DDX11-229ENST00000545668 SETD1BQ9UPS6 1966 aaKnown RBP12.03□□□□□ -0.48
DDX11-229ENST00000545668 GNAT3A8MTJ3 354 aa12.03□□□□□ -0.48
DDX11-229ENST00000545668 GOLGA6L22H0YM25 854 aa12.03□□□□□ -0.48
DDX11-229ENST00000545668 SLC4A2P04920 1241 aa12.03□□□□□ -0.48
DDX11-229ENST00000545668 PROSER2Q86WR7 435 aaPredicted RBP12.03□□□□□ -0.48
DDX11-229ENST00000545668 DNTTIP2Q5QJE6 756 aaKnown RBP12.02□□□□□ -0.48
DDX11-229ENST00000545668 ORAI2Q96SN7 254 aa12.02□□□□□ -0.49
DDX11-229ENST00000545668 FMN2Q9NZ56 1722 aa12.02□□□□□ -0.49
DDX11-229ENST00000545668 KIF24Q5T7B8 1368 aa12.02□□□□□ -0.49
DDX11-229ENST00000545668 KIAA0232Q92628 1395 aa12.02□□□□□ -0.49
DDX11-229ENST00000545668 USP19O94966 1318 aa12.02□□□□□ -0.49
DDX11-229ENST00000545668 CDK11BP21127 795 aaKnown RBP12.02□□□□□ -0.49
DDX11-229ENST00000545668 ADGRL3Q9HAR2 1447 aa12.02□□□□□ -0.49
DDX11-229ENST00000545668 NUCB1Q02818 461 aa12.01□□□□□ -0.49
DDX11-229ENST00000545668 CHD1LQ86WJ1 897 aa12.01□□□□□ -0.49
DDX11-229ENST00000545668 CRB1P82279 1406 aa12.01□□□□□ -0.49
DDX11-229ENST00000545668 KCNH5Q8NCM2 988 aa12.01□□□□□ -0.49
DDX11-229ENST00000545668 GCC1Q96CN9 775 aa12.01□□□□□ -0.49
DDX11-229ENST00000545668 GBP4Q96PP9 640 aa12.01□□□□□ -0.49
DDX11-229ENST00000545668 HTATSF1O43719 755 aaKnown RBP12□□□□□ -0.49
DDX11-229ENST00000545668 XRCC6P12956 609 aaKnown RBP eCLIP12□□□□□ -0.49
DDX11-229ENST00000545668 NOL8Q76FK4 1167 aaKnown RBP12□□□□□ -0.49
DDX11-229ENST00000545668 IP6K1Q92551 441 aa12□□□□□ -0.49
DDX11-229ENST00000545668 CHD2O14647 1828 aaKnown RBP12□□□□□ -0.49
DDX11-229ENST00000545668 STK31Q9BXU1 1019 aa12□□□□□ -0.49
DDX11-229ENST00000545668 RGPD1P0DJD0 1748 aa12□□□□□ -0.49
DDX11-229ENST00000545668 RRP9O43818 475 aaKnown RBP11.99□□□□□ -0.49
DDX11-229ENST00000545668 SLC4A10Q6U841 1118 aa11.99□□□□□ -0.49
DDX11-229ENST00000545668 ADAMTSL3P82987 1691 aa11.99□□□□□ -0.49
DDX11-229ENST00000545668 FOXD4L6Q3SYB3 417 aaPredicted RBP11.99□□□□□ -0.49
DDX11-229ENST00000545668 FOXD4L3Q6VB84 417 aaPredicted RBP11.99□□□□□ -0.49
DDX11-229ENST00000545668 BCL11BQ9C0K0 894 aaPredicted RBP11.99□□□□□ -0.49
DDX11-229ENST00000545668 PTPRCP08575 1304 aa11.99□□□□□ -0.49
DDX11-229ENST00000545668 INTS3Q68E01 1043 aaKnown RBP11.98□□□□□ -0.49
DDX11-229ENST00000545668 ZNF142P52746 1687 aaPredicted RBP11.98□□□□□ -0.49
DDX11-229ENST00000545668 NECTIN2Q92692 538 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 196 ms