RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 API5Q9BZZ5 524 aaKnown RBP19.7■□□□□ 0.74
SNRNP70-203ENST00000544278 RIMS1Q86UR5 1692 aaKnown RBP19.7■□□□□ 0.74
SNRNP70-203ENST00000544278 MSH6P52701 1360 aa19.7■□□□□ 0.74
SNRNP70-203ENST00000544278 CHL1O00533 1208 aa19.7■□□□□ 0.74
SNRNP70-203ENST00000544278 EIF2S2P20042 333 aaKnown RBP19.7■□□□□ 0.74
SNRNP70-203ENST00000544278 ANTXR1Q9H6X2 564 aa19.7■□□□□ 0.74
SNRNP70-203ENST00000544278 EXOC6BQ9Y2D4 811 aa19.7■□□□□ 0.74
SNRNP70-203ENST00000544278 GSPT1P15170 499 aaKnown RBP19.7■□□□□ 0.74
SNRNP70-203ENST00000544278 LRRC59Q96AG4 307 aaKnown RBP19.68■□□□□ 0.74
SNRNP70-203ENST00000544278 HSP90AA1P07900 732 aaKnown RBP19.67■□□□□ 0.74
SNRNP70-203ENST00000544278 FKBP5Q13451 457 aaPredicted RBP19.67■□□□□ 0.74
SNRNP70-203ENST00000544278 ESCO1Q5FWF5 840 aa19.66■□□□□ 0.74
SNRNP70-203ENST00000544278 HSCBQ8IWL3 235 aa19.66■□□□□ 0.74
SNRNP70-203ENST00000544278 THEMISQ8N1K5 641 aaPredicted RBP19.65■□□□□ 0.74
SNRNP70-203ENST00000544278 HSP90AB1P08238 724 aaKnown RBP19.65■□□□□ 0.74
SNRNP70-203ENST00000544278 PLEKHM2Q8IWE5 1019 aa19.65■□□□□ 0.74
SNRNP70-203ENST00000544278 PLEKHG1Q9ULL1 1385 aa19.65■□□□□ 0.74
SNRNP70-203ENST00000544278 CEP85Q6P2H3 762 aa19.64■□□□□ 0.73
SNRNP70-203ENST00000544278 OVOS2A0A0J9YW53 1432 aa19.64■□□□□ 0.73
SNRNP70-203ENST00000544278 OVOS2Q6IE36 1432 aa19.64■□□□□ 0.73
SNRNP70-203ENST00000544278 ARHGAP45Q92619 1136 aa19.64■□□□□ 0.73
SNRNP70-203ENST00000544278 KCNQ3O43525 872 aa19.63■□□□□ 0.73
SNRNP70-203ENST00000544278 GCC1Q96CN9 775 aa19.63■□□□□ 0.73
SNRNP70-203ENST00000544278 RGPD8O14715 1765 aaPredicted RBP19.63■□□□□ 0.73
SNRNP70-203ENST00000544278 UBR1Q8IWV7 1749 aa19.63■□□□□ 0.73
SNRNP70-203ENST00000544278 IL17REQ8NFR9 667 aa19.63■□□□□ 0.73
SNRNP70-203ENST00000544278 TECPR2O15040 1411 aa19.63■□□□□ 0.73
SNRNP70-203ENST00000544278 HOXC9P31274 260 aa19.63■□□□□ 0.73
SNRNP70-203ENST00000544278 PTCH1Q13635 1447 aa19.63■□□□□ 0.73
SNRNP70-203ENST00000544278 NOL8Q76FK4 1167 aaKnown RBP19.63■□□□□ 0.73
SNRNP70-203ENST00000544278 PHAXQ9H814 394 aaKnown RBP19.63■□□□□ 0.73
SNRNP70-203ENST00000544278 LGR6Q9HBX8 967 aa19.62■□□□□ 0.73
SNRNP70-203ENST00000544278 PEAK1Q9H792 1746 aa19.62■□□□□ 0.73
SNRNP70-203ENST00000544278 CEP170BQ9Y4F5 1589 aaPredicted RBP19.62■□□□□ 0.73
SNRNP70-203ENST00000544278 BMP2KLQ5H9B9 411 aa19.61■□□□□ 0.73
SNRNP70-203ENST00000544278 SIRT1Q96EB6 747 aa19.61■□□□□ 0.73
SNRNP70-203ENST00000544278 ORAI2Q96SN7 254 aa19.61■□□□□ 0.73
SNRNP70-203ENST00000544278 VSIG10Q8N0Z9 540 aa19.61■□□□□ 0.73
SNRNP70-203ENST00000544278 DDX17Q92841 729 aaKnown RBP19.61■□□□□ 0.73
SNRNP70-203ENST00000544278 TBX22Q9Y458 520 aa19.61■□□□□ 0.73
SNRNP70-203ENST00000544278 REREQ9P2R6 1566 aa19.61■□□□□ 0.73
SNRNP70-203ENST00000544278 DTNBO60941 627 aa19.61■□□□□ 0.73
SNRNP70-203ENST00000544278 KIF2CQ99661 725 aa19.6■□□□□ 0.73
SNRNP70-203ENST00000544278 MAP4K4O95819 1239 aaPredicted RBP19.6■□□□□ 0.73
SNRNP70-203ENST00000544278 FOXD4L5Q5VV16 416 aaPredicted RBP19.6■□□□□ 0.73
SNRNP70-203ENST00000544278 FOXD4L4Q8WXT5 416 aaPredicted RBP19.6■□□□□ 0.73
SNRNP70-203ENST00000544278 CHAMP1Q96JM3 812 aa19.6■□□□□ 0.73
SNRNP70-203ENST00000544278 PIK3R4Q99570 1358 aa19.59■□□□□ 0.73
SNRNP70-203ENST00000544278 VIRMAQ69YN4 1812 aaKnown RBP19.59■□□□□ 0.73
SNRNP70-203ENST00000544278 C3P01024 1663 aa19.59■□□□□ 0.73
SNRNP70-203ENST00000544278 PSME1Q06323 249 aa19.59■□□□□ 0.73
SNRNP70-203ENST00000544278 DCTPP1Q9H773 170 aa19.59■□□□□ 0.73
SNRNP70-203ENST00000544278 IL1RAPL2Q9NP60 686 aa19.59■□□□□ 0.73
SNRNP70-203ENST00000544278 ITSN1Q15811 1721 aa19.59■□□□□ 0.73
SNRNP70-203ENST00000544278 PNMA6EA0A0J9YXQ4 647 aa19.59■□□□□ 0.73
SNRNP70-203ENST00000544278 BRPF1P55201 1214 aaPredicted RBP19.59■□□□□ 0.73
SNRNP70-203ENST00000544278 MPRIPQ6WCQ1 1025 aa19.59■□□□□ 0.73
SNRNP70-203ENST00000544278 STK31Q9BXU1 1019 aa19.59■□□□□ 0.73
SNRNP70-203ENST00000544278 FLT4P35916 1363 aa19.58■□□□□ 0.73
SNRNP70-203ENST00000544278 NBPF6Q5VWK0 638 aa19.58■□□□□ 0.73
SNRNP70-203ENST00000544278 INTS3Q68E01 1043 aaKnown RBP19.58■□□□□ 0.73
SNRNP70-203ENST00000544278 NBPF4Q96M43 638 aa19.58■□□□□ 0.73
SNRNP70-203ENST00000544278 ANKRD44Q8N8A2 993 aa19.58■□□□□ 0.72
SNRNP70-203ENST00000544278 SDSP20132 328 aa19.57■□□□□ 0.72
SNRNP70-203ENST00000544278 RTL1A6NKG5 1358 aa19.57■□□□□ 0.72
SNRNP70-203ENST00000544278 MON2Q7Z3U7 1717 aa19.57■□□□□ 0.72
SNRNP70-203ENST00000544278 RGS12O14924 1447 aa19.57■□□□□ 0.72
SNRNP70-203ENST00000544278 FLIIQ13045 1269 aa19.57■□□□□ 0.72
SNRNP70-203ENST00000544278 PHF8Q9UPP1 1060 aa19.57■□□□□ 0.72
SNRNP70-203ENST00000544278 CRB1P82279 1406 aa19.57■□□□□ 0.72
SNRNP70-203ENST00000544278 GNAT3A8MTJ3 354 aa19.57■□□□□ 0.72
SNRNP70-203ENST00000544278 MCM4P33991 863 aa19.56■□□□□ 0.72
SNRNP70-203ENST00000544278 GAS2L2Q8NHY3 880 aa19.56■□□□□ 0.72
SNRNP70-203ENST00000544278 TPRNQ4KMQ1 711 aa19.55■□□□□ 0.72
SNRNP70-203ENST00000544278 LRRFIP2Q9Y608 721 aaKnown RBP19.55■□□□□ 0.72
SNRNP70-203ENST00000544278 CDC45O75419 566 aa19.55■□□□□ 0.72
SNRNP70-203ENST00000544278 KNDC1Q76NI1 1749 aa19.54■□□□□ 0.72
SNRNP70-203ENST00000544278 SBNO1A3KN83 1393 aa19.54■□□□□ 0.72
SNRNP70-203ENST00000544278 PRAMEF22A3QJZ6 481 aa19.54■□□□□ 0.72
SNRNP70-203ENST00000544278 TTC22Q5TAA0 569 aa19.54■□□□□ 0.72
SNRNP70-203ENST00000544278 RILPL2Q969X0 211 aa19.54■□□□□ 0.72
SNRNP70-203ENST00000544278 CHMP5Q9NZZ3 219 aa19.54■□□□□ 0.72
SNRNP70-203ENST00000544278 IGSF1Q8N6C5 1336 aa19.54■□□□□ 0.72
SNRNP70-203ENST00000544278 HDGFL1Q5TGJ6 251 aa19.53■□□□□ 0.72
SNRNP70-203ENST00000544278 PANK2Q9BZ23 570 aa19.53■□□□□ 0.72
SNRNP70-203ENST00000544278 ZC3H6P61129 1189 aaKnown RBP19.53■□□□□ 0.72
SNRNP70-203ENST00000544278 ATP10DQ9P241 1426 aa19.53■□□□□ 0.72
SNRNP70-203ENST00000544278 AKAP12Q02952 1782 aa19.52■□□□□ 0.72
SNRNP70-203ENST00000544278 USP31Q70CQ4 1352 aa19.52■□□□□ 0.71
SNRNP70-203ENST00000544278 TTC21AQ8NDW8 1320 aa19.52■□□□□ 0.71
SNRNP70-203ENST00000544278 TRIM6-TRIM34B2RNG4 842 aa19.51■□□□□ 0.71
SNRNP70-203ENST00000544278 SSFA2P28290 1259 aa19.51■□□□□ 0.71
SNRNP70-203ENST00000544278 RBM25P49756 843 aaKnown RBP19.51■□□□□ 0.71
SNRNP70-203ENST00000544278 NUTM1Q86Y26 1132 aa19.51■□□□□ 0.71
SNRNP70-203ENST00000544278 PIP4K2AP48426 406 aaPredicted RBP19.51■□□□□ 0.71
SNRNP70-203ENST00000544278 FOXD4L6Q3SYB3 417 aaPredicted RBP19.51■□□□□ 0.71
SNRNP70-203ENST00000544278 FOXD4L3Q6VB84 417 aaPredicted RBP19.51■□□□□ 0.71
SNRNP70-203ENST00000544278 CHMP4BQ9H444 224 aaKnown RBP19.51■□□□□ 0.71
SNRNP70-203ENST00000544278 PKP1Q13835 747 aa19.51■□□□□ 0.71
SNRNP70-203ENST00000544278 TNPO1Q92973 898 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms