RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 NGDNQ8NEJ9 315 aaKnown RBP23.32■■□□□ 1.32
COPS7A-215ENST00000543155 USP54Q70EL1 1684 aa23.32■■□□□ 1.32
COPS7A-215ENST00000543155 KDRP35968 1356 aa23.31■■□□□ 1.32
COPS7A-215ENST00000543155 RBM25P49756 843 aaKnown RBP23.3■■□□□ 1.32
COPS7A-215ENST00000543155 PTPRCP08575 1304 aa23.3■■□□□ 1.32
COPS7A-215ENST00000543155 KRT24Q2M2I5 525 aa23.29■■□□□ 1.32
COPS7A-215ENST00000543155 MARF1Q9Y4F3 1742 aaKnown RBP23.29■■□□□ 1.32
COPS7A-215ENST00000543155 CEP170BQ9Y4F5 1589 aaPredicted RBP23.27■■□□□ 1.32
COPS7A-215ENST00000543155 LRRC37A3O60309 1634 aa23.27■■□□□ 1.32
COPS7A-215ENST00000543155 IGSF1Q8N6C5 1336 aa23.27■■□□□ 1.32
COPS7A-215ENST00000543155 ATP10DQ9P241 1426 aa23.27■■□□□ 1.32
COPS7A-215ENST00000543155 HSCBQ8IWL3 235 aa23.26■■□□□ 1.31
COPS7A-215ENST00000543155 AMPHP49418 695 aa23.26■■□□□ 1.31
COPS7A-215ENST00000543155 MTHFSDQ2M296 383 aaKnown RBP23.26■■□□□ 1.31
COPS7A-215ENST00000543155 PLPPR3Q6T4P5 718 aa23.26■■□□□ 1.31
COPS7A-215ENST00000543155 RTF1Q92541 710 aaKnown RBP23.26■■□□□ 1.31
COPS7A-215ENST00000543155 DCTPP1Q9H773 170 aa23.25■■□□□ 1.31
COPS7A-215ENST00000543155 MSH6P52701 1360 aa23.24■■□□□ 1.31
COPS7A-215ENST00000543155 ANKRD44Q8N8A2 993 aa23.24■■□□□ 1.31
COPS7A-215ENST00000543155 GAS2L2Q8NHY3 880 aa23.24■■□□□ 1.31
COPS7A-215ENST00000543155 RPAP2Q8IXW5 612 aaPredicted RBP23.23■■□□□ 1.31
COPS7A-215ENST00000543155 EYA1Q99502 592 aa23.23■■□□□ 1.31
COPS7A-215ENST00000543155 FOXO3O43524 673 aa23.22■■□□□ 1.31
COPS7A-215ENST00000543155 SNX21Q969T3 373 aa23.22■■□□□ 1.31
COPS7A-215ENST00000543155 TBC1D9Q6ZT07 1266 aa23.21■■□□□ 1.31
COPS7A-215ENST00000543155 CHMP5Q9NZZ3 219 aa23.21■■□□□ 1.31
COPS7A-215ENST00000543155 TSPYL4Q9UJ04 414 aa23.21■■□□□ 1.31
COPS7A-215ENST00000543155 NCOA3Q9Y6Q9 1424 aa23.21■■□□□ 1.31
COPS7A-215ENST00000543155 RTL1A6NKG5 1358 aa23.21■■□□□ 1.31
COPS7A-215ENST00000543155 SPRYD3Q8NCJ5 442 aa23.21■■□□□ 1.31
COPS7A-215ENST00000543155 FAM208AQ9UK61 1670 aaKnown RBP23.2■■□□□ 1.3
COPS7A-215ENST00000543155 HTATSF1O43719 755 aaKnown RBP23.2■■□□□ 1.3
COPS7A-215ENST00000543155 CDC45O75419 566 aa23.2■■□□□ 1.3
COPS7A-215ENST00000543155 NLRP6P59044 892 aa23.2■■□□□ 1.3
COPS7A-215ENST00000543155 CEP85Q6P2H3 762 aa23.2■■□□□ 1.3
COPS7A-215ENST00000543155 EIF5BO60841 1220 aaKnown RBP23.19■■□□□ 1.3
COPS7A-215ENST00000543155 SLC4A2P04920 1241 aa23.19■■□□□ 1.3
COPS7A-215ENST00000543155 NWD1Q149M9 1564 aa23.19■■□□□ 1.3
COPS7A-215ENST00000543155 KCNA6P17658 529 aa23.18■■□□□ 1.3
COPS7A-215ENST00000543155 PLEKHM2Q8IWE5 1019 aa23.18■■□□□ 1.3
COPS7A-215ENST00000543155 MIS18AQ9NYP9 233 aa23.18■■□□□ 1.3
COPS7A-215ENST00000543155 HOXC9P31274 260 aa23.17■■□□□ 1.3
COPS7A-215ENST00000543155 GSPT1P15170 499 aaKnown RBP23.16■■□□□ 1.3
COPS7A-215ENST00000543155 TTC22Q5TAA0 569 aa23.15■■□□□ 1.3
COPS7A-215ENST00000543155 MEIS3Q99687 375 aa23.15■■□□□ 1.3
COPS7A-215ENST00000543155 CHD2O14647 1828 aaKnown RBP23.15■■□□□ 1.3
COPS7A-215ENST00000543155 CCT4P50991 539 aaKnown RBP23.14■■□□□ 1.3
COPS7A-215ENST00000543155 LTN1O94822 1766 aa23.14■■□□□ 1.29
COPS7A-215ENST00000543155 KIF2CQ99661 725 aa23.14■■□□□ 1.29
COPS7A-215ENST00000543155 GNAT3A8MTJ3 354 aa23.13■■□□□ 1.29
COPS7A-215ENST00000543155 N4BP2Q86UW6 1770 aaPredicted RBP23.13■■□□□ 1.29
COPS7A-215ENST00000543155 MCM4P33991 863 aa23.12■■□□□ 1.29
COPS7A-215ENST00000543155 G2E3Q7L622 706 aa23.12■■□□□ 1.29
COPS7A-215ENST00000543155 MAP3K5Q99683 1374 aa23.12■■□□□ 1.29
COPS7A-215ENST00000543155 CACNA1FO60840 1977 aa23.11■■□□□ 1.29
COPS7A-215ENST00000543155 HMMRO75330 724 aa23.11■■□□□ 1.29
COPS7A-215ENST00000543155 DDIT3P35638 169 aa23.11■■□□□ 1.29
COPS7A-215ENST00000543155 ABTB2Q8N961 1025 aa23.11■■□□□ 1.29
COPS7A-215ENST00000543155 STK31Q9BXU1 1019 aa23.11■■□□□ 1.29
COPS7A-215ENST00000543155 NUTM2GQ5VZR2 741 aa23.11■■□□□ 1.29
COPS7A-215ENST00000543155 IL27Q8NEV9 243 aa23.11■■□□□ 1.29
COPS7A-215ENST00000543155 SOS1Q07889 1333 aaPredicted RBP23.11■■□□□ 1.29
COPS7A-215ENST00000543155 ZNF142P52746 1687 aaPredicted RBP23.11■■□□□ 1.29
COPS7A-215ENST00000543155 HSP90AB1P08238 724 aaKnown RBP23.1■■□□□ 1.29
COPS7A-215ENST00000543155 C16orf71Q8IYS4 520 aaPredicted RBP23.09■■□□□ 1.29
COPS7A-215ENST00000543155 SLC4A10Q6U841 1118 aa23.08■■□□□ 1.29
COPS7A-215ENST00000543155 BABAM1Q9NWV8 329 aa23.08■■□□□ 1.29
COPS7A-215ENST00000543155 CCDC30Q5VVM6 783 aa23.08■■□□□ 1.28
COPS7A-215ENST00000543155 CIZ1Q9ULV3 898 aaPredicted RBP23.08■■□□□ 1.28
COPS7A-215ENST00000543155 F6X3S4 739 aa23.07■■□□□ 1.28
COPS7A-215ENST00000543155 BRPF3Q9ULD4 1205 aa23.07■■□□□ 1.28
COPS7A-215ENST00000543155 PHF8Q9UPP1 1060 aa23.06■■□□□ 1.28
COPS7A-215ENST00000543155 OTUD7AQ8TE49 926 aaPredicted RBP23.06■■□□□ 1.28
COPS7A-215ENST00000543155 NFAT5O94916 1531 aa23.06■■□□□ 1.28
COPS7A-215ENST00000543155 K7ELQ4 463 aaPredicted RBP23.05■■□□□ 1.28
COPS7A-215ENST00000543155 SMARCA5O60264 1052 aaPredicted RBP23.05■■□□□ 1.28
COPS7A-215ENST00000543155 GNAI2P04899 355 aa23.05■■□□□ 1.28
COPS7A-215ENST00000543155 FLIIQ13045 1269 aa23.05■■□□□ 1.28
COPS7A-215ENST00000543155 PXDNLA1KZ92 1463 aa23.04■■□□□ 1.28
COPS7A-215ENST00000543155 CASC1Q6TDU7 716 aa23.04■■□□□ 1.28
COPS7A-215ENST00000543155 TAF7Q15545 349 aaPredicted RBP23.03■■□□□ 1.28
COPS7A-215ENST00000543155 IL17REQ8NFR9 667 aa23.03■■□□□ 1.28
COPS7A-215ENST00000543155 LTV1Q96GA3 475 aaPredicted RBP23.03■■□□□ 1.28
COPS7A-215ENST00000543155 DDX11L8A8MPP1 907 aa23.03■■□□□ 1.28
COPS7A-215ENST00000543155 APBB1O00213 710 aa23.03■■□□□ 1.28
COPS7A-215ENST00000543155 C14orf37Q86TY3 774 aa23.03■■□□□ 1.28
COPS7A-215ENST00000543155 PHRF1Q9P1Y6 1649 aaKnown RBP23.03■■□□□ 1.28
COPS7A-215ENST00000543155 SDSP20132 328 aa23.02■■□□□ 1.28
COPS7A-215ENST00000543155 ANKLE2Q86XL3 938 aa23.02■■□□□ 1.28
COPS7A-215ENST00000543155 CD2BP2O95400 341 aaKnown RBP23.02■■□□□ 1.28
COPS7A-215ENST00000543155 FKBP5Q13451 457 aaPredicted RBP23.02■■□□□ 1.28
COPS7A-215ENST00000543155 GNAI3P08754 354 aa23.01■■□□□ 1.27
COPS7A-215ENST00000543155 ADGRL3Q9HAR2 1447 aa23.01■■□□□ 1.27
COPS7A-215ENST00000543155 MED1Q15648 1581 aaPredicted RBP23.01■■□□□ 1.27
COPS7A-215ENST00000543155 RABEP1Q15276 862 aa23■■□□□ 1.27
COPS7A-215ENST00000543155 L1TD1Q5T7N2 865 aaKnown RBP23■■□□□ 1.27
COPS7A-215ENST00000543155 IP6K1Q92551 441 aa23■■□□□ 1.27
COPS7A-215ENST00000543155 RBM42Q9BTD8 480 aaKnown RBP23■■□□□ 1.27
COPS7A-215ENST00000543155 OSBPL3Q9H4L5 887 aa23■■□□□ 1.27
COPS7A-215ENST00000543155 HSP90AA1P07900 732 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms