RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 ITSN1Q15811 1721 aa10.46□□□□□ -0.73
AC005840.3-201ENST00000541888 BCL2L12Q9HB09 334 aa10.46□□□□□ -0.74
AC005840.3-201ENST00000541888 ADGRB2O60241 1585 aa10.46□□□□□ -0.74
AC005840.3-201ENST00000541888 ATAD2Q6PL18 1390 aa10.46□□□□□ -0.74
AC005840.3-201ENST00000541888 MYBBP1AQ9BQG0 1328 aaKnown RBP10.45□□□□□ -0.74
AC005840.3-201ENST00000541888 ZDHHC16Q969W1 377 aa10.45□□□□□ -0.74
AC005840.3-201ENST00000541888 KCNK17Q96T54 332 aa10.45□□□□□ -0.74
AC005840.3-201ENST00000541888 PCDHGA10Q9Y5H3 936 aa10.45□□□□□ -0.74
AC005840.3-201ENST00000541888 TOPAZ1Q8N9V7 1692 aa10.45□□□□□ -0.74
AC005840.3-201ENST00000541888 KIF20BQ96Q89 1820 aa10.45□□□□□ -0.74
AC005840.3-201ENST00000541888 FMN2Q9NZ56 1722 aa10.44□□□□□ -0.74
AC005840.3-201ENST00000541888 ZNF335Q9H4Z2 1342 aaPredicted RBP10.44□□□□□ -0.74
AC005840.3-201ENST00000541888 AKAP12Q02952 1782 aa10.44□□□□□ -0.74
AC005840.3-201ENST00000541888 PROSER2Q86WR7 435 aaPredicted RBP10.44□□□□□ -0.74
AC005840.3-201ENST00000541888 ADAM33Q9BZ11 813 aa10.44□□□□□ -0.74
AC005840.3-201ENST00000541888 SLC24A1O60721 1099 aa10.43□□□□□ -0.74
AC005840.3-201ENST00000541888 PPP2R1AP30153 589 aa10.43□□□□□ -0.74
AC005840.3-201ENST00000541888 ARIH1Q9Y4X5 557 aaPredicted RBP10.43□□□□□ -0.74
AC005840.3-201ENST00000541888 MON2Q7Z3U7 1717 aa10.43□□□□□ -0.74
AC005840.3-201ENST00000541888 XIRP1Q702N8 1843 aaKnown RBP10.43□□□□□ -0.74
AC005840.3-201ENST00000541888 PHF14O94880 888 aa10.42□□□□□ -0.74
AC005840.3-201ENST00000541888 HNRNPUQ00839 825 aaKnown RBP eCLIP10.42□□□□□ -0.74
AC005840.3-201ENST00000541888 RALBP1Q15311 655 aa10.42□□□□□ -0.74
AC005840.3-201ENST00000541888 ADGRD1Q6QNK2 874 aa10.42□□□□□ -0.74
AC005840.3-201ENST00000541888 NME9Q86XW9 330 aa10.42□□□□□ -0.74
AC005840.3-201ENST00000541888 SIRT1Q96EB6 747 aa10.42□□□□□ -0.74
AC005840.3-201ENST00000541888 CDC42BPGQ6DT37 1551 aa10.42□□□□□ -0.74
AC005840.3-201ENST00000541888 ACEP12821 1306 aa10.42□□□□□ -0.74
AC005840.3-201ENST00000541888 NWD1Q149M9 1564 aa10.42□□□□□ -0.74
AC005840.3-201ENST00000541888 PIK3R4Q99570 1358 aa10.42□□□□□ -0.74
AC005840.3-201ENST00000541888 PTGER2P43116 358 aa10.42□□□□□ -0.74
AC005840.3-201ENST00000541888 XPCQ01831 940 aaPredicted RBP10.42□□□□□ -0.74
AC005840.3-201ENST00000541888 HDGFL2Q7Z4V5 671 aaPredicted RBP10.42□□□□□ -0.74
AC005840.3-201ENST00000541888 TERF2IPQ9NYB0 399 aa10.42□□□□□ -0.74
AC005840.3-201ENST00000541888 CGNL1Q0VF96 1302 aa10.41□□□□□ -0.74
AC005840.3-201ENST00000541888 FYB1O15117 783 aa10.41□□□□□ -0.74
AC005840.3-201ENST00000541888 PDIA6Q15084 440 aa10.41□□□□□ -0.74
AC005840.3-201ENST00000541888 NUTM2GQ5VZR2 741 aa10.41□□□□□ -0.74
AC005840.3-201ENST00000541888 MORC1Q86VD1 984 aa10.41□□□□□ -0.74
AC005840.3-201ENST00000541888 SALL2Q9Y467 1007 aaPredicted RBP10.41□□□□□ -0.74
AC005840.3-201ENST00000541888 TK2O00142 265 aa10.4□□□□□ -0.74
AC005840.3-201ENST00000541888 PTPREP23469 700 aa10.4□□□□□ -0.74
AC005840.3-201ENST00000541888 NLRP13Q86W25 1043 aa10.4□□□□□ -0.74
AC005840.3-201ENST00000541888 DDX17Q92841 729 aaKnown RBP10.4□□□□□ -0.74
AC005840.3-201ENST00000541888 ANKRD26Q9UPS8 1709 aa10.4□□□□□ -0.74
AC005840.3-201ENST00000541888 TMEM94Q12767 1356 aa10.4□□□□□ -0.74
AC005840.3-201ENST00000541888 SPDYE16A6NNV3 312 aaPredicted RBP10.4□□□□□ -0.75
AC005840.3-201ENST00000541888 DDX12PQ92771 950 aa10.4□□□□□ -0.75
AC005840.3-201ENST00000541888 ORAI2Q96SN7 254 aa10.4□□□□□ -0.75
AC005840.3-201ENST00000541888 CPSF1Q10570 1443 aaKnown RBP10.4□□□□□ -0.75
AC005840.3-201ENST00000541888 ADGRL3Q9HAR2 1447 aa10.4□□□□□ -0.75
AC005840.3-201ENST00000541888 NRKQ7Z2Y5 1582 aa10.39□□□□□ -0.75
AC005840.3-201ENST00000541888 TYW1BQ6NUM6 668 aa10.39□□□□□ -0.75
AC005840.3-201ENST00000541888 PNISRQ8TF01 805 aaKnown RBP10.39□□□□□ -0.75
AC005840.3-201ENST00000541888 RNF166Q96A37 237 aaPredicted RBP10.39□□□□□ -0.75
AC005840.3-201ENST00000541888 PUS7Q96PZ0 661 aaKnown RBP10.39□□□□□ -0.75
AC005840.3-201ENST00000541888 MAP2P11137 1827 aaKnown RBP10.39□□□□□ -0.75
AC005840.3-201ENST00000541888 PPM1GO15355 546 aaPredicted RBP10.38□□□□□ -0.75
AC005840.3-201ENST00000541888 ESCO1Q5FWF5 840 aa10.38□□□□□ -0.75
AC005840.3-201ENST00000541888 NGDNQ8NEJ9 315 aaKnown RBP10.38□□□□□ -0.75
AC005840.3-201ENST00000541888 FBXW7Q969H0 707 aa10.38□□□□□ -0.75
AC005840.3-201ENST00000541888 BRD4O60885 1362 aaPredicted RBP10.38□□□□□ -0.75
AC005840.3-201ENST00000541888 NINLQ9Y2I6 1382 aa10.38□□□□□ -0.75
AC005840.3-201ENST00000541888 HRO43593 1189 aa10.37□□□□□ -0.75
AC005840.3-201ENST00000541888 MTHFSP49914 203 aa10.37□□□□□ -0.75
AC005840.3-201ENST00000541888 EPAS1Q99814 870 aa10.37□□□□□ -0.75
AC005840.3-201ENST00000541888 CCDC146Q8IYE0 955 aa10.36□□□□□ -0.75
AC005840.3-201ENST00000541888 VPS9D1Q9Y2B5 631 aa10.36□□□□□ -0.75
AC005840.3-201ENST00000541888 SHPRHQ149N8 1683 aa10.36□□□□□ -0.75
AC005840.3-201ENST00000541888 USP6P35125 1406 aa10.36□□□□□ -0.75
AC005840.3-201ENST00000541888 EDC4Q6P2E9 1401 aaKnown RBP10.36□□□□□ -0.75
AC005840.3-201ENST00000541888 PIK3C2AO00443 1686 aa10.35□□□□□ -0.75
AC005840.3-201ENST00000541888 FOXO3O43524 673 aa10.35□□□□□ -0.75
AC005840.3-201ENST00000541888 RRS1Q15050 365 aaKnown RBP10.35□□□□□ -0.75
AC005840.3-201ENST00000541888 ADAMTS8Q9UP79 889 aa10.35□□□□□ -0.75
AC005840.3-201ENST00000541888 NPC1L1Q9UHC9 1359 aa10.35□□□□□ -0.75
AC005840.3-201ENST00000541888 ZBED2Q9BTP6 218 aa10.35□□□□□ -0.75
AC005840.3-201ENST00000541888 SLC4A5Q9BY07 1137 aa10.35□□□□□ -0.75
AC005840.3-201ENST00000541888 EMILIN1Q9Y6C2 1016 aa10.35□□□□□ -0.75
AC005840.3-201ENST00000541888 TTC21BQ7Z4L5 1316 aa10.35□□□□□ -0.75
AC005840.3-201ENST00000541888 PLEKHG3A1L390 1219 aa10.34□□□□□ -0.75
AC005840.3-201ENST00000541888 LRRC7Q96NW7 1537 aa10.33□□□□□ -0.76
AC005840.3-201ENST00000541888 MARF1Q9Y4F3 1742 aaKnown RBP10.33□□□□□ -0.76
AC005840.3-201ENST00000541888 COL9A1P20849 921 aa10.33□□□□□ -0.76
AC005840.3-201ENST00000541888 LMOD2Q6P5Q4 547 aa10.33□□□□□ -0.76
AC005840.3-201ENST00000541888 POLR3AO14802 1390 aaPredicted RBP10.32□□□□□ -0.76
AC005840.3-201ENST00000541888 ATF3P18847 181 aa10.32□□□□□ -0.76
AC005840.3-201ENST00000541888 C6orf132Q5T0Z8 1188 aa10.32□□□□□ -0.76
AC005840.3-201ENST00000541888 KCNV2Q8TDN2 545 aa10.32□□□□□ -0.76
AC005840.3-201ENST00000541888 C19orf44Q9H6X5 657 aa10.32□□□□□ -0.76
AC005840.3-201ENST00000541888 C1orf167Q5SNV9 1468 aa10.31□□□□□ -0.76
AC005840.3-201ENST00000541888 ANKARQ7Z5J8 1434 aa10.31□□□□□ -0.76
AC005840.3-201ENST00000541888 NBR1Q14596 966 aa10.31□□□□□ -0.76
AC005840.3-201ENST00000541888 WDR43Q15061 677 aaKnown RBP eCLIP10.31□□□□□ -0.76
AC005840.3-201ENST00000541888 ARHGEF1Q92888 912 aaKnown RBP10.31□□□□□ -0.76
AC005840.3-201ENST00000541888 COG3Q96JB2 828 aa10.31□□□□□ -0.76
AC005840.3-201ENST00000541888 MST1RQ04912 1400 aa10.31□□□□□ -0.76
AC005840.3-201ENST00000541888 ZBTB7CA1YPR0 619 aa10.3□□□□□ -0.76
AC005840.3-201ENST00000541888 PPP1R3GB7ZBB8 358 aa10.3□□□□□ -0.76
AC005840.3-201ENST00000541888 PSME1Q06323 249 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms