RNA–Protein interactions for RNA: ENST00000541421.2

SMLR1-201, Transcript of small leucine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMLR1, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMLR1-201ENST00000541421 SNX21Q969T3 373 aa12.94□□□□□ -0.34
SMLR1-201ENST00000541421 ANKLE2Q86XL3 938 aa12.93□□□□□ -0.34
SMLR1-201ENST00000541421 AMOTL2Q9Y2J4 779 aa12.93□□□□□ -0.34
SMLR1-201ENST00000541421 RGS12O14924 1447 aa12.93□□□□□ -0.34
SMLR1-201ENST00000541421 PTPRCP08575 1304 aa12.92□□□□□ -0.34
SMLR1-201ENST00000541421 HSPA2P54652 639 aa12.92□□□□□ -0.34
SMLR1-201ENST00000541421 KRT24Q2M2I5 525 aa12.92□□□□□ -0.34
SMLR1-201ENST00000541421 DCTPP1Q9H773 170 aa12.92□□□□□ -0.34
SMLR1-201ENST00000541421 TBX22Q9Y458 520 aa12.92□□□□□ -0.34
SMLR1-201ENST00000541421 CRB1P82279 1406 aa12.92□□□□□ -0.34
SMLR1-201ENST00000541421 MAP3K19Q56UN5 1328 aa12.92□□□□□ -0.34
SMLR1-201ENST00000541421 NCOA3Q9Y6Q9 1424 aa12.92□□□□□ -0.34
SMLR1-201ENST00000541421 TBC1D9Q6ZT07 1266 aa12.92□□□□□ -0.34
SMLR1-201ENST00000541421 BRPF3Q9ULD4 1205 aa12.92□□□□□ -0.34
SMLR1-201ENST00000541421 SBNO1A3KN83 1393 aa12.91□□□□□ -0.34
SMLR1-201ENST00000541421 FLT4P35916 1363 aa12.91□□□□□ -0.34
SMLR1-201ENST00000541421 MCM4P33991 863 aa12.91□□□□□ -0.34
SMLR1-201ENST00000541421 SOX12O15370 315 aa12.91□□□□□ -0.34
SMLR1-201ENST00000541421 EIF5BO60841 1220 aaKnown RBP12.91□□□□□ -0.34
SMLR1-201ENST00000541421 RPAP2Q8IXW5 612 aaPredicted RBP12.91□□□□□ -0.34
SMLR1-201ENST00000541421 ANKRD44Q8N8A2 993 aa12.91□□□□□ -0.34
SMLR1-201ENST00000541421 ATP10DQ9P241 1426 aa12.9□□□□□ -0.34
SMLR1-201ENST00000541421 FMN2Q9NZ56 1722 aa12.9□□□□□ -0.34
SMLR1-201ENST00000541421 CDC45O75419 566 aa12.9□□□□□ -0.34
SMLR1-201ENST00000541421 KDRP35968 1356 aa12.9□□□□□ -0.34
SMLR1-201ENST00000541421 DIP2AQ14689 1571 aa12.89□□□□□ -0.35
SMLR1-201ENST00000541421 PLEKHM2Q8IWE5 1019 aa12.89□□□□□ -0.35
SMLR1-201ENST00000541421 NGDNQ8NEJ9 315 aaKnown RBP12.89□□□□□ -0.35
SMLR1-201ENST00000541421 RTF1Q92541 710 aaKnown RBP12.89□□□□□ -0.35
SMLR1-201ENST00000541421 DDIT3P35638 169 aa12.89□□□□□ -0.35
SMLR1-201ENST00000541421 MTHFSDQ2M296 383 aaKnown RBP12.89□□□□□ -0.35
SMLR1-201ENST00000541421 KIF2CQ99661 725 aa12.89□□□□□ -0.35
SMLR1-201ENST00000541421 MSH6P52701 1360 aa12.89□□□□□ -0.35
SMLR1-201ENST00000541421 CEP85Q6P2H3 762 aa12.88□□□□□ -0.35
SMLR1-201ENST00000541421 RTL1A6NKG5 1358 aa12.88□□□□□ -0.35
SMLR1-201ENST00000541421 SLC4A2P04920 1241 aa12.88□□□□□ -0.35
SMLR1-201ENST00000541421 GSPT1P15170 499 aaKnown RBP12.88□□□□□ -0.35
SMLR1-201ENST00000541421 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
SMLR1-201ENST00000541421 AMPHP49418 695 aa12.87□□□□□ -0.35
SMLR1-201ENST00000541421 GAS2L2Q8NHY3 880 aa12.87□□□□□ -0.35
SMLR1-201ENST00000541421 TSPYL4Q9UJ04 414 aa12.87□□□□□ -0.35
SMLR1-201ENST00000541421 FOXO3O43524 673 aa12.87□□□□□ -0.35
SMLR1-201ENST00000541421 HSP90AB1P08238 724 aaKnown RBP12.87□□□□□ -0.35
SMLR1-201ENST00000541421 TTC22Q5TAA0 569 aa12.87□□□□□ -0.35
SMLR1-201ENST00000541421 CIZ1Q9ULV3 898 aaPredicted RBP12.87□□□□□ -0.35
SMLR1-201ENST00000541421 EYA1Q99502 592 aa12.86□□□□□ -0.35
SMLR1-201ENST00000541421 NPHP4O75161 1426 aaPredicted RBP12.86□□□□□ -0.35
SMLR1-201ENST00000541421 ANKARQ7Z5J8 1434 aa12.86□□□□□ -0.35
SMLR1-201ENST00000541421 PIK3C2AO00443 1686 aa12.86□□□□□ -0.35
SMLR1-201ENST00000541421 L1TD1Q5T7N2 865 aaKnown RBP12.86□□□□□ -0.35
SMLR1-201ENST00000541421 MEIS3Q99687 375 aa12.86□□□□□ -0.35
SMLR1-201ENST00000541421 HTATSF1O43719 755 aaKnown RBP12.85□□□□□ -0.35
SMLR1-201ENST00000541421 MIS18AQ9NYP9 233 aa12.85□□□□□ -0.35
SMLR1-201ENST00000541421 STRCQ7RTU9 1775 aa12.85□□□□□ -0.35
SMLR1-201ENST00000541421 RGPD8O14715 1765 aaPredicted RBP12.85□□□□□ -0.35
SMLR1-201ENST00000541421 XRN1Q8IZH2 1706 aaKnown RBP12.85□□□□□ -0.35
SMLR1-201ENST00000541421 DDX11L8A8MPP1 907 aa12.85□□□□□ -0.35
SMLR1-201ENST00000541421 RTN4Q9NQC3 1192 aaKnown RBP12.85□□□□□ -0.35
SMLR1-201ENST00000541421 K7ELQ4 463 aaPredicted RBP12.84□□□□□ -0.35
SMLR1-201ENST00000541421 HMMRO75330 724 aa12.84□□□□□ -0.35
SMLR1-201ENST00000541421 CCT4P50991 539 aaKnown RBP12.84□□□□□ -0.35
SMLR1-201ENST00000541421 NLRP6P59044 892 aa12.84□□□□□ -0.35
SMLR1-201ENST00000541421 C16orf71Q8IYS4 520 aaPredicted RBP12.84□□□□□ -0.35
SMLR1-201ENST00000541421 TRAK2O60296 914 aa12.83□□□□□ -0.36
SMLR1-201ENST00000541421 STK31Q9BXU1 1019 aa12.83□□□□□ -0.36
SMLR1-201ENST00000541421 LRRC37A3O60309 1634 aa12.82□□□□□ -0.36
SMLR1-201ENST00000541421 CD2BP2O95400 341 aaKnown RBP12.82□□□□□ -0.36
SMLR1-201ENST00000541421 HSP90AA1P07900 732 aaKnown RBP12.82□□□□□ -0.36
SMLR1-201ENST00000541421 G2E3Q7L622 706 aa12.82□□□□□ -0.36
SMLR1-201ENST00000541421 HOXC9P31274 260 aa12.82□□□□□ -0.36
SMLR1-201ENST00000541421 SLC4A10Q6U841 1118 aa12.82□□□□□ -0.36
SMLR1-201ENST00000541421 GNAT3A8MTJ3 354 aa12.81□□□□□ -0.36
SMLR1-201ENST00000541421 RAB3GAP1Q15042 981 aa12.81□□□□□ -0.36
SMLR1-201ENST00000541421 CASC1Q6TDU7 716 aa12.81□□□□□ -0.36
SMLR1-201ENST00000541421 OTUD7AQ8TE49 926 aaPredicted RBP12.81□□□□□ -0.36
SMLR1-201ENST00000541421 RBM42Q9BTD8 480 aaKnown RBP12.81□□□□□ -0.36
SMLR1-201ENST00000541421 SOS1Q07889 1333 aaPredicted RBP12.81□□□□□ -0.36
SMLR1-201ENST00000541421 USP54Q70EL1 1684 aa12.81□□□□□ -0.36
SMLR1-201ENST00000541421 F6X3S4 739 aa12.81□□□□□ -0.36
SMLR1-201ENST00000541421 SMARCA5O60264 1052 aaPredicted RBP12.81□□□□□ -0.36
SMLR1-201ENST00000541421 KCNA6P17658 529 aa12.81□□□□□ -0.36
SMLR1-201ENST00000541421 RABEP1Q15276 862 aa12.81□□□□□ -0.36
SMLR1-201ENST00000541421 TNPO1Q92973 898 aaKnown RBP12.81□□□□□ -0.36
SMLR1-201ENST00000541421 GBP4Q96PP9 640 aa12.81□□□□□ -0.36
SMLR1-201ENST00000541421 SDSP20132 328 aa12.8□□□□□ -0.36
SMLR1-201ENST00000541421 CCDC30Q5VVM6 783 aa12.8□□□□□ -0.36
SMLR1-201ENST00000541421 FSD2A1L4K1 749 aa12.8□□□□□ -0.36
SMLR1-201ENST00000541421 GOLGA6L3A6NEY3 463 aa12.8□□□□□ -0.36
SMLR1-201ENST00000541421 APBB1O00213 710 aa12.8□□□□□ -0.36
SMLR1-201ENST00000541421 USP26Q9BXU7 913 aa12.8□□□□□ -0.36
SMLR1-201ENST00000541421 MAP3K5Q99683 1374 aa12.79□□□□□ -0.36
SMLR1-201ENST00000541421 GNAI2P04899 355 aa12.79□□□□□ -0.36
SMLR1-201ENST00000541421 NWD1Q149M9 1564 aa12.79□□□□□ -0.36
SMLR1-201ENST00000541421 BABAM1Q9NWV8 329 aa12.79□□□□□ -0.36
SMLR1-201ENST00000541421 MARF1Q9Y4F3 1742 aaKnown RBP12.79□□□□□ -0.36
SMLR1-201ENST00000541421 FLIIQ13045 1269 aa12.79□□□□□ -0.36
SMLR1-201ENST00000541421 ABTB2Q8N961 1025 aa12.79□□□□□ -0.36
SMLR1-201ENST00000541421 GZF1Q9H116 711 aaPredicted RBP12.79□□□□□ -0.36
SMLR1-201ENST00000541421 OSBPL3Q9H4L5 887 aa12.79□□□□□ -0.36
SMLR1-201ENST00000541421 CHD2O14647 1828 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms