RNA–Protein interactions for RNA: ENST00000539507.1

SLC3A2-214, Transcript of solute carrier family 3 member 2, humanhuman

TSL 3

Gene SLC3A2, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-214ENST00000539507 HMGB2P26583 209 aaKnown RBP9.48□□□□□ -0.89
SLC3A2-214ENST00000539507 PRIM1P49642 420 aaKnown RBP9.48□□□□□ -0.89
SLC3A2-214ENST00000539507 NLGN2Q8NFZ4 835 aa9.48□□□□□ -0.89
SLC3A2-214ENST00000539507 PUS7Q96PZ0 661 aaKnown RBP9.48□□□□□ -0.89
SLC3A2-214ENST00000539507 SIN3AQ96ST3 1273 aa9.48□□□□□ -0.89
SLC3A2-214ENST00000539507 CARD11Q9BXL7 1154 aa9.48□□□□□ -0.89
SLC3A2-214ENST00000539507 SLC12A5Q9H2X9 1139 aa9.48□□□□□ -0.89
SLC3A2-214ENST00000539507 A0A1W2PP64 1363 aa9.48□□□□□ -0.89
SLC3A2-214ENST00000539507 MON2Q7Z3U7 1717 aa9.48□□□□□ -0.89
SLC3A2-214ENST00000539507 NEUROD1Q13562 356 aa9.47□□□□□ -0.89
SLC3A2-214ENST00000539507 ZCRB1Q8TBF4 217 aaKnown RBP9.47□□□□□ -0.89
SLC3A2-214ENST00000539507 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
SLC3A2-214ENST00000539507 CCNL1Q9UK58 526 aaPredicted RBP9.47□□□□□ -0.89
SLC3A2-214ENST00000539507 RGPD5Q99666 1765 aa9.47□□□□□ -0.89
SLC3A2-214ENST00000539507 BTAF1O14981 1849 aa9.47□□□□□ -0.89
SLC3A2-214ENST00000539507 KCNQ4P56696 695 aa9.46□□□□□ -0.9
SLC3A2-214ENST00000539507 IFFO2Q5TF58 517 aa9.46□□□□□ -0.9
SLC3A2-214ENST00000539507 COG3Q96JB2 828 aa9.46□□□□□ -0.9
SLC3A2-214ENST00000539507 NSD2O96028 1365 aa9.46□□□□□ -0.9
SLC3A2-214ENST00000539507 USP47Q96K76 1375 aa9.46□□□□□ -0.9
SLC3A2-214ENST00000539507 AMPHP49418 695 aa9.45□□□□□ -0.9
SLC3A2-214ENST00000539507 SAMD1Q6SPF0 538 aaPredicted RBP9.45□□□□□ -0.9
SLC3A2-214ENST00000539507 CGNL1Q0VF96 1302 aa9.45□□□□□ -0.9
SLC3A2-214ENST00000539507 MAP3K19Q56UN5 1328 aa9.45□□□□□ -0.9
SLC3A2-214ENST00000539507 YBX3P16989 372 aaKnown RBP eCLIP9.44□□□□□ -0.9
SLC3A2-214ENST00000539507 HOXC9P31274 260 aa9.44□□□□□ -0.9
SLC3A2-214ENST00000539507 COL23A1Q86Y22 540 aaPredicted RBP9.44□□□□□ -0.9
SLC3A2-214ENST00000539507 FLAD1Q8NFF5 587 aa9.44□□□□□ -0.9
SLC3A2-214ENST00000539507 CD2APQ9Y5K6 639 aa9.44□□□□□ -0.9
SLC3A2-214ENST00000539507 RTL1A6NKG5 1358 aa9.44□□□□□ -0.9
SLC3A2-214ENST00000539507 CHD4Q14839 1912 aa9.44□□□□□ -0.9
SLC3A2-214ENST00000539507 QSER1Q2KHR3 1735 aa9.43□□□□□ -0.9
SLC3A2-214ENST00000539507 MEGF6O75095 1541 aa9.43□□□□□ -0.9
SLC3A2-214ENST00000539507 ATP10DQ9P241 1426 aa9.43□□□□□ -0.9
SLC3A2-214ENST00000539507 SLC24A1O60721 1099 aa9.43□□□□□ -0.9
SLC3A2-214ENST00000539507 ATXN8OSP0DMR3 200 aa9.43□□□□□ -0.9
SLC3A2-214ENST00000539507 TRIM26Q12899 539 aaPredicted RBP9.43□□□□□ -0.9
SLC3A2-214ENST00000539507 RAPGEF4Q8WZA2 1011 aa9.43□□□□□ -0.9
SLC3A2-214ENST00000539507 FAM208AQ9UK61 1670 aaKnown RBP9.42□□□□□ -0.9
SLC3A2-214ENST00000539507 SMG6Q86US8 1419 aaKnown RBP9.42□□□□□ -0.9
SLC3A2-214ENST00000539507 MSL1Q68DK7 614 aa9.42□□□□□ -0.9
SLC3A2-214ENST00000539507 GPBP1L1Q9HC44 474 aaPredicted RBP9.42□□□□□ -0.9
SLC3A2-214ENST00000539507 LTN1O94822 1766 aa9.42□□□□□ -0.9
SLC3A2-214ENST00000539507 COL24A1Q17RW2 1714 aa9.42□□□□□ -0.9
SLC3A2-214ENST00000539507 SHANK3Q9BYB0 1731 aa9.42□□□□□ -0.9
SLC3A2-214ENST00000539507 PCDH11XQ9BZA7 1347 aa9.41□□□□□ -0.9
SLC3A2-214ENST00000539507 PCDH11YQ9BZA8 1340 aa9.41□□□□□ -0.9
SLC3A2-214ENST00000539507 TATP17735 454 aaPredicted RBP9.41□□□□□ -0.9
SLC3A2-214ENST00000539507 UTRNP46939 3433 aa9.41□□□□□ -0.9
SLC3A2-214ENST00000539507 PALLDQ8WX93 1383 aa9.4□□□□□ -0.9
SLC3A2-214ENST00000539507 ZEB1P37275 1124 aaPredicted RBP9.4□□□□□ -0.9
SLC3A2-214ENST00000539507 NBPF6Q5VWK0 638 aa9.4□□□□□ -0.9
SLC3A2-214ENST00000539507 SMARCC1Q92922 1105 aaPredicted RBP9.4□□□□□ -0.9
SLC3A2-214ENST00000539507 NBPF4Q96M43 638 aa9.4□□□□□ -0.9
SLC3A2-214ENST00000539507 RNF39Q9H2S5 420 aa9.4□□□□□ -0.9
SLC3A2-214ENST00000539507 NSD3Q9BZ95 1437 aa9.39□□□□□ -0.91
SLC3A2-214ENST00000539507 ADCY9O60503 1353 aa9.39□□□□□ -0.91
SLC3A2-214ENST00000539507 TONSLQ96HA7 1378 aa9.39□□□□□ -0.91
SLC3A2-214ENST00000539507 HSPA6P17066 643 aa9.39□□□□□ -0.91
SLC3A2-214ENST00000539507 RRS1Q15050 365 aaKnown RBP9.39□□□□□ -0.91
SLC3A2-214ENST00000539507 AK7Q96M32 723 aa9.39□□□□□ -0.91
SLC3A2-214ENST00000539507 TESK2Q96S53 571 aa9.39□□□□□ -0.91
SLC3A2-214ENST00000539507 LY75O60449 1722 aa9.39□□□□□ -0.91
SLC3A2-214ENST00000539507 DOT1LQ8TEK3 1739 aa9.39□□□□□ -0.91
SLC3A2-214ENST00000539507 FBLN1P23142 703 aa9.38□□□□□ -0.91
SLC3A2-214ENST00000539507 MPRIPQ6WCQ1 1025 aa9.38□□□□□ -0.91
SLC3A2-214ENST00000539507 USHBP1Q8N6Y0 703 aa9.38□□□□□ -0.91
SLC3A2-214ENST00000539507 INSRP06213 1382 aa9.37□□□□□ -0.91
SLC3A2-214ENST00000539507 KIF24Q5T7B8 1368 aa9.37□□□□□ -0.91
SLC3A2-214ENST00000539507 ST20-MTHFSA0A0A6YYL1 179 aa9.37□□□□□ -0.91
SLC3A2-214ENST00000539507 FLT4P35916 1363 aa9.37□□□□□ -0.91
SLC3A2-214ENST00000539507 IGSF1Q8N6C5 1336 aa9.36□□□□□ -0.91
SLC3A2-214ENST00000539507 FYB1O15117 783 aa9.36□□□□□ -0.91
SLC3A2-214ENST00000539507 SSFA2P28290 1259 aa9.36□□□□□ -0.91
SLC3A2-214ENST00000539507 HSP90AB2PQ58FF8 381 aa9.36□□□□□ -0.91
SLC3A2-214ENST00000539507 ZNF526Q8TF50 670 aaPredicted RBP9.36□□□□□ -0.91
SLC3A2-214ENST00000539507 GGNBP2Q9H3C7 697 aa9.36□□□□□ -0.91
SLC3A2-214ENST00000539507 TUBGCP6Q96RT7 1819 aa9.35□□□□□ -0.91
SLC3A2-214ENST00000539507 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.35□□□□□ -0.91
SLC3A2-214ENST00000539507 CYP27B1O15528 508 aa9.35□□□□□ -0.91
SLC3A2-214ENST00000539507 PHF14O94880 888 aa9.35□□□□□ -0.91
SLC3A2-214ENST00000539507 TMF1P82094 1093 aa9.34□□□□□ -0.91
SLC3A2-214ENST00000539507 C1QBPQ07021 282 aaKnown RBP9.34□□□□□ -0.91
SLC3A2-214ENST00000539507 SPG7Q9UQ90 795 aa9.34□□□□□ -0.91
SLC3A2-214ENST00000539507 KAT6BQ8WYB5 2073 aa9.33□□□□□ -0.92
SLC3A2-214ENST00000539507 C5P01031 1676 aa9.33□□□□□ -0.92
SLC3A2-214ENST00000539507 LOC102724428A0A0B4J2F2 783 aa9.33□□□□□ -0.92
SLC3A2-214ENST00000539507 SIK1P57059 783 aa9.33□□□□□ -0.92
SLC3A2-214ENST00000539507 NKX1-1Q15270 411 aaPredicted RBP9.33□□□□□ -0.92
SLC3A2-214ENST00000539507 CDCA8Q53HL2 280 aa9.33□□□□□ -0.92
SLC3A2-214ENST00000539507 AMIGO3Q86WK7 504 aa9.33□□□□□ -0.92
SLC3A2-214ENST00000539507 PIGBQ92521 554 aa9.33□□□□□ -0.92
SLC3A2-214ENST00000539507 C4BP0C0L5 1744 aa9.32□□□□□ -0.92
SLC3A2-214ENST00000539507 KIF3CO14782 793 aa9.32□□□□□ -0.92
SLC3A2-214ENST00000539507 GNPATO15228 680 aa9.32□□□□□ -0.92
SLC3A2-214ENST00000539507 APLP1P51693 650 aa9.32□□□□□ -0.92
SLC3A2-214ENST00000539507 LINC00116Q8NCU8 138 aa9.32□□□□□ -0.92
SLC3A2-214ENST00000539507 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.32□□□□□ -0.92
SLC3A2-214ENST00000539507 TMOD3Q9NYL9 352 aa9.32□□□□□ -0.92
SLC3A2-214ENST00000539507 WWC3Q9ULE0 1092 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms