RNA–Protein interactions for RNA: ENST00000535187.5

RAPGEF4-213, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 2 BASIC

Gene RAPGEF4, Length 3,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-213ENST00000535187 PARP4Q9UKK3 1724 aaKnown RBP7.26□□□□□ -1.25
RAPGEF4-213ENST00000535187 APBA3O96018 575 aa7.26□□□□□ -1.25
RAPGEF4-213ENST00000535187 BCL11BQ9C0K0 894 aaPredicted RBP7.26□□□□□ -1.25
RAPGEF4-213ENST00000535187 SLC12A5Q9H2X9 1139 aa7.26□□□□□ -1.25
RAPGEF4-213ENST00000535187 OVOS2A0A0G2JMS6 1433 aa7.26□□□□□ -1.25
RAPGEF4-213ENST00000535187 OVOS2A0A0J9YW53 1432 aa7.26□□□□□ -1.25
RAPGEF4-213ENST00000535187 OVOS2Q6IE36 1432 aa7.26□□□□□ -1.25
RAPGEF4-213ENST00000535187 PPP2R1AP30153 589 aa7.25□□□□□ -1.25
RAPGEF4-213ENST00000535187 AMER1Q5JTC6 1135 aaPredicted RBP7.25□□□□□ -1.25
RAPGEF4-213ENST00000535187 DUSP27Q5VZP5 1158 aa7.25□□□□□ -1.25
RAPGEF4-213ENST00000535187 KDM2BQ8NHM5 1336 aa7.25□□□□□ -1.25
RAPGEF4-213ENST00000535187 ZNF521Q96K83 1311 aa7.25□□□□□ -1.25
RAPGEF4-213ENST00000535187 POLD1P28340 1107 aa7.24□□□□□ -1.25
RAPGEF4-213ENST00000535187 TNNT2P45379 298 aaPredicted RBP7.24□□□□□ -1.25
RAPGEF4-213ENST00000535187 LAS1LQ9Y4W2 734 aaKnown RBP7.24□□□□□ -1.25
RAPGEF4-213ENST00000535187 ITSN1Q15811 1721 aa7.24□□□□□ -1.25
RAPGEF4-213ENST00000535187 COL24A1Q17RW2 1714 aa7.24□□□□□ -1.25
RAPGEF4-213ENST00000535187 IFT172Q9UG01 1749 aa7.24□□□□□ -1.25
RAPGEF4-213ENST00000535187 KIAA0232Q92628 1395 aa7.24□□□□□ -1.25
RAPGEF4-213ENST00000535187 DDX54Q8TDD1 881 aaKnown RBP7.23□□□□□ -1.25
RAPGEF4-213ENST00000535187 TULP4Q9NRJ4 1543 aa7.23□□□□□ -1.25
RAPGEF4-213ENST00000535187 PNNQ9H307 717 aaKnown RBP7.23□□□□□ -1.25
RAPGEF4-213ENST00000535187 ABCC6O95255 1503 aa7.23□□□□□ -1.25
RAPGEF4-213ENST00000535187 EZH2Q15910 746 aaKnown RBP7.23□□□□□ -1.25
RAPGEF4-213ENST00000535187 C1orf141Q5JVX7 400 aa7.23□□□□□ -1.25
RAPGEF4-213ENST00000535187 SPINK5Q9NQ38 1064 aaPredicted RBP7.23□□□□□ -1.25
RAPGEF4-213ENST00000535187 SPG7Q9UQ90 795 aa7.23□□□□□ -1.25
RAPGEF4-213ENST00000535187 IL2RBP14784 551 aa7.22□□□□□ -1.25
RAPGEF4-213ENST00000535187 RTL5Q5HYW3 569 aaPredicted RBP7.22□□□□□ -1.25
RAPGEF4-213ENST00000535187 GGNBP2Q9H3C7 697 aa7.22□□□□□ -1.25
RAPGEF4-213ENST00000535187 CNKSR2Q8WXI2 1034 aa7.22□□□□□ -1.25
RAPGEF4-213ENST00000535187 SPATA31A1Q5TZJ5 1347 aa7.22□□□□□ -1.25
RAPGEF4-213ENST00000535187 PRR36Q9H6K5 1346 aa7.22□□□□□ -1.25
RAPGEF4-213ENST00000535187 HSP90AB1P08238 724 aaKnown RBP7.22□□□□□ -1.25
RAPGEF4-213ENST00000535187 C10orf71Q711Q0 1435 aa7.22□□□□□ -1.25
RAPGEF4-213ENST00000535187 ANKRD24Q8TF21 1146 aa7.22□□□□□ -1.25
RAPGEF4-213ENST00000535187 MYOM1P52179 1685 aa7.21□□□□□ -1.25
RAPGEF4-213ENST00000535187 PPLO60437 1756 aa7.21□□□□□ -1.25
RAPGEF4-213ENST00000535187 TRMT2AQ8IZ69 625 aaKnown RBP7.21□□□□□ -1.25
RAPGEF4-213ENST00000535187 ALS2Q96Q42 1657 aa7.21□□□□□ -1.25
RAPGEF4-213ENST00000535187 NPHP1O15259 732 aa7.21□□□□□ -1.26
RAPGEF4-213ENST00000535187 SLFN5Q08AF3 891 aa7.21□□□□□ -1.26
RAPGEF4-213ENST00000535187 NME9Q86XW9 330 aa7.21□□□□□ -1.26
RAPGEF4-213ENST00000535187 SBNO2Q9Y2G9 1366 aa7.21□□□□□ -1.26
RAPGEF4-213ENST00000535187 SLC4A3P48751 1232 aa7.2□□□□□ -1.26
RAPGEF4-213ENST00000535187 GOLGA2Q08379 1002 aa7.2□□□□□ -1.26
RAPGEF4-213ENST00000535187 C8orf34Q49A92 452 aa7.2□□□□□ -1.26
RAPGEF4-213ENST00000535187 KLHL34Q8N239 644 aa7.2□□□□□ -1.26
RAPGEF4-213ENST00000535187 POLR3AO14802 1390 aaPredicted RBP7.2□□□□□ -1.26
RAPGEF4-213ENST00000535187 PLEKHO1Q53GL0 409 aaPredicted RBP7.2□□□□□ -1.26
RAPGEF4-213ENST00000535187 CCDC146Q8IYE0 955 aa7.2□□□□□ -1.26
RAPGEF4-213ENST00000535187 CPDO75976 1380 aa7.2□□□□□ -1.26
RAPGEF4-213ENST00000535187 WDR43Q15061 677 aaKnown RBP eCLIP7.19□□□□□ -1.26
RAPGEF4-213ENST00000535187 LARP1Q6PKG0 1096 aaKnown RBP7.19□□□□□ -1.26
RAPGEF4-213ENST00000535187 ARXQ96QS3 562 aa7.19□□□□□ -1.26
RAPGEF4-213ENST00000535187 CARD10Q9BWT7 1032 aa7.19□□□□□ -1.26
RAPGEF4-213ENST00000535187 TRPM3Q9HCF6 1732 aaPredicted RBP7.19□□□□□ -1.26
RAPGEF4-213ENST00000535187 U2SURPO15042 1029 aaKnown RBP7.19□□□□□ -1.26
RAPGEF4-213ENST00000535187 TRIM37O94972 964 aa7.19□□□□□ -1.26
RAPGEF4-213ENST00000535187 GPR162Q16538 588 aa7.19□□□□□ -1.26
RAPGEF4-213ENST00000535187 CENPQQ7L2Z9 268 aaPredicted RBP7.19□□□□□ -1.26
RAPGEF4-213ENST00000535187 NPM3O75607 178 aaKnown RBP7.19□□□□□ -1.26
RAPGEF4-213ENST00000535187 SMARCC1Q92922 1105 aaPredicted RBP7.19□□□□□ -1.26
RAPGEF4-213ENST00000535187 SYT17Q9BSW7 474 aa7.19□□□□□ -1.26
RAPGEF4-213ENST00000535187 WDR17Q8IZU2 1322 aa7.19□□□□□ -1.26
RAPGEF4-213ENST00000535187 EDC4Q6P2E9 1401 aaKnown RBP7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 NSD3Q9BZ95 1437 aa7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 IL27Q8NEV9 243 aa7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 RTF1Q92541 710 aaKnown RBP7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 IP6K1Q92551 441 aa7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 USP6P35125 1406 aa7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 APAF1O14727 1248 aa7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 BCAR3O75815 825 aa7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 ZCRB1Q8TBF4 217 aaKnown RBP7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 CARD14Q9BXL6 1004 aa7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 NPC1L1Q9UHC9 1359 aa7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 FSTL1Q12841 308 aa7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 ARHGEF25Q86VW2 580 aa7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 GPBP1L1Q9HC44 474 aaPredicted RBP7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 SHANK3Q9BYB0 1731 aa7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 CRYBG1Q9Y4K1 1723 aa7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 KAT6BQ8WYB5 2073 aa7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 TOPAZ1Q8N9V7 1692 aa7.18□□□□□ -1.26
RAPGEF4-213ENST00000535187 ANKRD36BQ8N2N9 1353 aa7.17□□□□□ -1.26
RAPGEF4-213ENST00000535187 JMYQ8N9B5 988 aa7.17□□□□□ -1.26
RAPGEF4-213ENST00000535187 FLAD1Q8NFF5 587 aa7.17□□□□□ -1.26
RAPGEF4-213ENST00000535187 PLEKHG2Q9H7P9 1386 aa7.17□□□□□ -1.26
RAPGEF4-213ENST00000535187 MAPK8IP3Q9UPT6 1336 aa7.17□□□□□ -1.26
RAPGEF4-213ENST00000535187 SSH2Q76I76 1423 aa7.17□□□□□ -1.26
RAPGEF4-213ENST00000535187 FAM161AQ3B820 660 aa7.16□□□□□ -1.26
RAPGEF4-213ENST00000535187 IGHDP01880 384 aa7.16□□□□□ -1.26
RAPGEF4-213ENST00000535187 TNS4Q8IZW8 715 aa7.16□□□□□ -1.26
RAPGEF4-213ENST00000535187 PEAK1Q9H792 1746 aa7.16□□□□□ -1.26
RAPGEF4-213ENST00000535187 AKAP12Q02952 1782 aa7.16□□□□□ -1.26
RAPGEF4-213ENST00000535187 NFKBIBQ15653 356 aa7.16□□□□□ -1.26
RAPGEF4-213ENST00000535187 DDRGK1Q96HY6 314 aa7.16□□□□□ -1.26
RAPGEF4-213ENST00000535187 ARHGEF28Q8N1W1 1705 aaKnown RBP7.15□□□□□ -1.26
RAPGEF4-213ENST00000535187 CRB1P82279 1406 aa7.15□□□□□ -1.26
RAPGEF4-213ENST00000535187 AMOTQ4VCS5 1084 aa7.15□□□□□ -1.26
RAPGEF4-213ENST00000535187 RGS3P49796 1198 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms