RNA–Protein interactions for RNA: ENST00000535120.1

MRE11-205, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 2

Gene MRE11, Length 234 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-205ENST00000535120 MAP3K5Q99683 1374 aa10.22□□□□□ -0.77
MRE11-205ENST00000535120 EDC4Q6P2E9 1401 aaKnown RBP10.22□□□□□ -0.77
MRE11-205ENST00000535120 HOXC9P31274 260 aa10.21□□□□□ -0.77
MRE11-205ENST00000535120 RRS1Q15050 365 aaKnown RBP10.21□□□□□ -0.77
MRE11-205ENST00000535120 COL23A1Q86Y22 540 aaPredicted RBP10.21□□□□□ -0.77
MRE11-205ENST00000535120 CD163L1Q9NR16 1453 aa10.21□□□□□ -0.78
MRE11-205ENST00000535120 PAPPAQ13219 1627 aa10.21□□□□□ -0.78
MRE11-205ENST00000535120 GRIN3BO60391 1043 aa10.2□□□□□ -0.78
MRE11-205ENST00000535120 ANKRD36BQ8N2N9 1353 aa10.2□□□□□ -0.78
MRE11-205ENST00000535120 USP47Q96K76 1375 aa10.2□□□□□ -0.78
MRE11-205ENST00000535120 PHF14O94880 888 aa10.19□□□□□ -0.78
MRE11-205ENST00000535120 MPRIPQ6WCQ1 1025 aa10.19□□□□□ -0.78
MRE11-205ENST00000535120 SMIM5Q71RC9 77 aa10.19□□□□□ -0.78
MRE11-205ENST00000535120 RAPGEF4Q8WZA2 1011 aa10.19□□□□□ -0.78
MRE11-205ENST00000535120 LTN1O94822 1766 aa10.19□□□□□ -0.78
MRE11-205ENST00000535120 MON2Q7Z3U7 1717 aa10.19□□□□□ -0.78
MRE11-205ENST00000535120 NBPF6Q5VWK0 638 aa10.18□□□□□ -0.78
MRE11-205ENST00000535120 NBPF4Q96M43 638 aa10.18□□□□□ -0.78
MRE11-205ENST00000535120 GGNBP2Q9H3C7 697 aa10.18□□□□□ -0.78
MRE11-205ENST00000535120 MEGF6O75095 1541 aa10.17□□□□□ -0.78
MRE11-205ENST00000535120 NSD2O96028 1365 aa10.17□□□□□ -0.78
MRE11-205ENST00000535120 TONSLQ96HA7 1378 aa10.17□□□□□ -0.78
MRE11-205ENST00000535120 ST20-MTHFSA0A0A6YYL1 179 aa10.17□□□□□ -0.78
MRE11-205ENST00000535120 TATP17735 454 aaPredicted RBP10.17□□□□□ -0.78
MRE11-205ENST00000535120 GPBP1L1Q9HC44 474 aaPredicted RBP10.17□□□□□ -0.78
MRE11-205ENST00000535120 CHD4Q14839 1912 aa10.17□□□□□ -0.78
MRE11-205ENST00000535120 GOLGB1Q14789 3259 aaKnown RBP10.17□□□□□ -0.78
MRE11-205ENST00000535120 PPM1GO15355 546 aaPredicted RBP10.16□□□□□ -0.78
MRE11-205ENST00000535120 AK7Q96M32 723 aa10.16□□□□□ -0.78
MRE11-205ENST00000535120 ATP10DQ9P241 1426 aa10.16□□□□□ -0.78
MRE11-205ENST00000535120 IFFO2Q5TF58 517 aa10.15□□□□□ -0.78
MRE11-205ENST00000535120 PALLDQ8WX93 1383 aa10.14□□□□□ -0.79
MRE11-205ENST00000535120 DOT1LQ8TEK3 1739 aa10.14□□□□□ -0.79
MRE11-205ENST00000535120 HSP90AB2PQ58FF8 381 aa10.14□□□□□ -0.79
MRE11-205ENST00000535120 SMG6Q86US8 1419 aaKnown RBP10.14□□□□□ -0.79
MRE11-205ENST00000535120 FYB1O15117 783 aa10.13□□□□□ -0.79
MRE11-205ENST00000535120 AMIGO3Q86WK7 504 aa10.13□□□□□ -0.79
MRE11-205ENST00000535120 TESK2Q96S53 571 aa10.13□□□□□ -0.79
MRE11-205ENST00000535120 CD2APQ9Y5K6 639 aa10.13□□□□□ -0.79
MRE11-205ENST00000535120 PCDH11XQ9BZA7 1347 aa10.12□□□□□ -0.79
MRE11-205ENST00000535120 PCDH11YQ9BZA8 1340 aa10.12□□□□□ -0.79
MRE11-205ENST00000535120 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.12□□□□□ -0.79
MRE11-205ENST00000535120 FLAD1Q8NFF5 587 aa10.12□□□□□ -0.79
MRE11-205ENST00000535120 PUS7Q96PZ0 661 aaKnown RBP10.12□□□□□ -0.79
MRE11-205ENST00000535120 SHANK3Q9BYB0 1731 aa10.12□□□□□ -0.79
MRE11-205ENST00000535120 CGNL1Q0VF96 1302 aa10.11□□□□□ -0.79
MRE11-205ENST00000535120 IGSF1Q8N6C5 1336 aa10.11□□□□□ -0.79
MRE11-205ENST00000535120 CYP27B1O15528 508 aa10.11□□□□□ -0.79
MRE11-205ENST00000535120 PIGBQ92521 554 aa10.11□□□□□ -0.79
MRE11-205ENST00000535120 TUBGCP6Q96RT7 1819 aa10.11□□□□□ -0.79
MRE11-205ENST00000535120 USP54Q70EL1 1684 aa10.11□□□□□ -0.79
MRE11-205ENST00000535120 GNPATO15228 680 aa10.1□□□□□ -0.79
MRE11-205ENST00000535120 HSPA6P17066 643 aa10.1□□□□□ -0.79
MRE11-205ENST00000535120 TMF1P82094 1093 aa10.1□□□□□ -0.79
MRE11-205ENST00000535120 SMARCC1Q92922 1105 aaPredicted RBP10.1□□□□□ -0.79
MRE11-205ENST00000535120 POLR3GLQ9BT43 218 aa10.1□□□□□ -0.79
MRE11-205ENST00000535120 EMILIN1Q9Y6C2 1016 aa10.1□□□□□ -0.79
MRE11-205ENST00000535120 RGPD2P0DJD1 1756 aa10.1□□□□□ -0.79
MRE11-205ENST00000535120 RTL1A6NKG5 1358 aa10.1□□□□□ -0.79
MRE11-205ENST00000535120 FAM208AQ9UK61 1670 aaKnown RBP10.09□□□□□ -0.79
MRE11-205ENST00000535120 LINC00116Q8NCU8 138 aa10.09□□□□□ -0.79
MRE11-205ENST00000535120 TMOD3Q9NYL9 352 aa10.09□□□□□ -0.79
MRE11-205ENST00000535120 CEP350Q5VT06 3117 aa10.09□□□□□ -0.79
MRE11-205ENST00000535120 LOC102724428A0A0B4J2F2 783 aa10.08□□□□□ -0.8
MRE11-205ENST00000535120 ATP6V1AP38606 617 aa10.08□□□□□ -0.8
MRE11-205ENST00000535120 SIK1P57059 783 aa10.08□□□□□ -0.8
MRE11-205ENST00000535120 ASAP1Q9ULH1 1129 aa10.08□□□□□ -0.8
MRE11-205ENST00000535120 SPG7Q9UQ90 795 aa10.08□□□□□ -0.8
MRE11-205ENST00000535120 INSRP06213 1382 aa10.08□□□□□ -0.8
MRE11-205ENST00000535120 FLT4P35916 1363 aa10.08□□□□□ -0.8
MRE11-205ENST00000535120 LY75O60449 1722 aa10.07□□□□□ -0.8
MRE11-205ENST00000535120 QSER1Q2KHR3 1735 aa10.07□□□□□ -0.8
MRE11-205ENST00000535120 MMP10P09238 476 aa10.07□□□□□ -0.8
MRE11-205ENST00000535120 HMGB2P26583 209 aaKnown RBP10.07□□□□□ -0.8
MRE11-205ENST00000535120 TNNT2P45379 298 aaPredicted RBP10.07□□□□□ -0.8
MRE11-205ENST00000535120 BCS1LQ9Y276 419 aa10.07□□□□□ -0.8
MRE11-205ENST00000535120 A0A0G2JLW4 131 aa10.06□□□□□ -0.8
MRE11-205ENST00000535120 SLC24A1O60721 1099 aa10.06□□□□□ -0.8
MRE11-205ENST00000535120 SSFA2P28290 1259 aa10.06□□□□□ -0.8
MRE11-205ENST00000535120 ITPK1Q13572 414 aa10.06□□□□□ -0.8
MRE11-205ENST00000535120 ARHGAP27Q6ZUM4 889 aa10.06□□□□□ -0.8
MRE11-205ENST00000535120 RBM42Q9BTD8 480 aaKnown RBP10.06□□□□□ -0.8
MRE11-205ENST00000535120 CARD14Q9BXL6 1004 aa10.05□□□□□ -0.8
MRE11-205ENST00000535120 C5P01031 1676 aa10.05□□□□□ -0.8
MRE11-205ENST00000535120 ADCY9O60503 1353 aa10.04□□□□□ -0.8
MRE11-205ENST00000535120 KIF3CO14782 793 aa10.04□□□□□ -0.8
MRE11-205ENST00000535120 CDCA8Q53HL2 280 aa10.04□□□□□ -0.8
MRE11-205ENST00000535120 EYA1Q99502 592 aa10.04□□□□□ -0.8
MRE11-205ENST00000535120 NSD3Q9BZ95 1437 aa10.04□□□□□ -0.8
MRE11-205ENST00000535120 C4BP0C0L5 1744 aa10.04□□□□□ -0.8
MRE11-205ENST00000535120 COL24A1Q17RW2 1714 aa10.04□□□□□ -0.8
MRE11-205ENST00000535120 FCHSD2O94868 740 aa10.03□□□□□ -0.8
MRE11-205ENST00000535120 TRAPPC3LQ5T215 181 aa10.03□□□□□ -0.8
MRE11-205ENST00000535120 IFNL2Q8IZJ0 200 aa10.03□□□□□ -0.8
MRE11-205ENST00000535120 ATG3Q9NT62 314 aa10.03□□□□□ -0.8
MRE11-205ENST00000535120 RTCBQ9Y3I0 505 aaKnown RBP10.03□□□□□ -0.8
MRE11-205ENST00000535120 PHKG2P15735 406 aa10.02□□□□□ -0.81
MRE11-205ENST00000535120 DPEP1P16444 411 aa10.02□□□□□ -0.81
MRE11-205ENST00000535120 RFC4P35249 363 aa10.02□□□□□ -0.81
MRE11-205ENST00000535120 NKX1-1Q15270 411 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms