RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 GOLGA6L1Q8N7Z2 621 aa13.55□□□□□ -0.24
AMBRA1-211ENST00000533727 PRAG1Q86YV5 1406 aa13.55□□□□□ -0.24
AMBRA1-211ENST00000533727 FYB1O15117 783 aa13.55□□□□□ -0.24
AMBRA1-211ENST00000533727 IL2RBP14784 551 aa13.55□□□□□ -0.24
AMBRA1-211ENST00000533727 NOB1Q9ULX3 412 aaKnown RBP13.55□□□□□ -0.24
AMBRA1-211ENST00000533727 USHBP1Q8N6Y0 703 aa13.55□□□□□ -0.24
AMBRA1-211ENST00000533727 ARHGEF12Q9NZN5 1544 aa13.55□□□□□ -0.24
AMBRA1-211ENST00000533727 CHD1O14646 1710 aa13.54□□□□□ -0.24
AMBRA1-211ENST00000533727 MYO5CQ9NQX4 1742 aa13.54□□□□□ -0.24
AMBRA1-211ENST00000533727 ALDH1L2Q3SY69 923 aa13.54□□□□□ -0.24
AMBRA1-211ENST00000533727 PANK1Q8TE04 598 aa13.54□□□□□ -0.24
AMBRA1-211ENST00000533727 ARHGEF5Q12774 1597 aa13.54□□□□□ -0.24
AMBRA1-211ENST00000533727 IKQ13123 557 aaPredicted RBP13.54□□□□□ -0.24
AMBRA1-211ENST00000533727 PPP1R42Q7Z4L9 355 aa13.54□□□□□ -0.24
AMBRA1-211ENST00000533727 RPAP2Q8IXW5 612 aaPredicted RBP13.54□□□□□ -0.24
AMBRA1-211ENST00000533727 IFIT1P09914 478 aaKnown RBP13.54□□□□□ -0.24
AMBRA1-211ENST00000533727 LNPKQ9C0E8 428 aa13.54□□□□□ -0.24
AMBRA1-211ENST00000533727 FLT4P35916 1363 aa13.54□□□□□ -0.24
AMBRA1-211ENST00000533727 SIRT1Q96EB6 747 aa13.53□□□□□ -0.24
AMBRA1-211ENST00000533727 RFC4P35249 363 aa13.53□□□□□ -0.24
AMBRA1-211ENST00000533727 PKNOX2Q96KN3 472 aa13.53□□□□□ -0.24
AMBRA1-211ENST00000533727 DNAJC2Q99543 621 aaKnown RBP13.53□□□□□ -0.24
AMBRA1-211ENST00000533727 LRRCC1Q9C099 1032 aa13.53□□□□□ -0.24
AMBRA1-211ENST00000533727 SLC4A3P48751 1232 aa13.53□□□□□ -0.24
AMBRA1-211ENST00000533727 SKOR2Q2VWA4 1001 aaPredicted RBP13.53□□□□□ -0.24
AMBRA1-211ENST00000533727 ABCC1P33527 1531 aa13.53□□□□□ -0.24
AMBRA1-211ENST00000533727 SNRPA1P09661 255 aaKnown RBP13.53□□□□□ -0.24
AMBRA1-211ENST00000533727 CAVIN4Q5BKX8 364 aa13.53□□□□□ -0.24
AMBRA1-211ENST00000533727 HOOK1Q9UJC3 728 aaKnown RBP13.53□□□□□ -0.24
AMBRA1-211ENST00000533727 NPATQ14207 1427 aa13.53□□□□□ -0.24
AMBRA1-211ENST00000533727 SLF2Q8IX21 1173 aa13.52□□□□□ -0.24
AMBRA1-211ENST00000533727 PTPRKQ15262 1439 aa13.52□□□□□ -0.24
AMBRA1-211ENST00000533727 TPM2P07951 284 aa13.52□□□□□ -0.24
AMBRA1-211ENST00000533727 RBM5P52756 815 aaKnown RBP eCLIP13.52□□□□□ -0.24
AMBRA1-211ENST00000533727 NCBP3Q53F19 620 aaKnown RBP13.52□□□□□ -0.24
AMBRA1-211ENST00000533727 MLH3Q9UHC1 1453 aa13.52□□□□□ -0.25
AMBRA1-211ENST00000533727 ST5P78524 1137 aa13.52□□□□□ -0.25
AMBRA1-211ENST00000533727 MCM10Q7L590 875 aa13.51□□□□□ -0.25
AMBRA1-211ENST00000533727 FAM13BQ9NYF5 915 aa13.51□□□□□ -0.25
AMBRA1-211ENST00000533727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.51□□□□□ -0.25
AMBRA1-211ENST00000533727 ZNF287Q9HBT7 754 aa13.51□□□□□ -0.25
AMBRA1-211ENST00000533727 CDC5LQ99459 802 aaKnown RBP13.51□□□□□ -0.25
AMBRA1-211ENST00000533727 POLD1P28340 1107 aa13.51□□□□□ -0.25
AMBRA1-211ENST00000533727 ZNF771Q7L3S4 317 aaPredicted RBP13.51□□□□□ -0.25
AMBRA1-211ENST00000533727 TRMT112Q9UI30 125 aaKnown RBP13.51□□□□□ -0.25
AMBRA1-211ENST00000533727 PRKCSHP14314 528 aaPredicted RBP13.5□□□□□ -0.25
AMBRA1-211ENST00000533727 MCTP1Q6DN14 999 aa13.5□□□□□ -0.25
AMBRA1-211ENST00000533727 SRGAP3O43295 1099 aa13.5□□□□□ -0.25
AMBRA1-211ENST00000533727 DDX49Q9Y6V7 483 aaKnown RBP13.5□□□□□ -0.25
AMBRA1-211ENST00000533727 ZFYVE9O95405 1425 aa13.5□□□□□ -0.25
AMBRA1-211ENST00000533727 AKAP4Q5JQC9 854 aa13.5□□□□□ -0.25
AMBRA1-211ENST00000533727 IL16Q14005 1332 aa13.5□□□□□ -0.25
AMBRA1-211ENST00000533727 METTL24Q5JXM2 366 aa13.5□□□□□ -0.25
AMBRA1-211ENST00000533727 GCP02774 474 aa13.49□□□□□ -0.25
AMBRA1-211ENST00000533727 IFIT5Q13325 482 aaKnown RBP13.49□□□□□ -0.25
AMBRA1-211ENST00000533727 CTNNA3Q9UI47 895 aa13.49□□□□□ -0.25
AMBRA1-211ENST00000533727 PIK3C2GO75747 1445 aa13.49□□□□□ -0.25
AMBRA1-211ENST00000533727 SLAIN2Q9P270 581 aa13.49□□□□□ -0.25
AMBRA1-211ENST00000533727 RAB11FIP3O75154 756 aa13.48□□□□□ -0.25
AMBRA1-211ENST00000533727 FAM43AQ8N2R8 423 aa13.48□□□□□ -0.25
AMBRA1-211ENST00000533727 ANKRD18BA2A2Z9 1011 aa13.48□□□□□ -0.25
AMBRA1-211ENST00000533727 MVPQ14764 893 aaKnown RBP13.48□□□□□ -0.25
AMBRA1-211ENST00000533727 PTPRCP08575 1304 aa13.48□□□□□ -0.25
AMBRA1-211ENST00000533727 TPD52L1Q16890 204 aaPredicted RBP13.48□□□□□ -0.25
AMBRA1-211ENST00000533727 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.48□□□□□ -0.25
AMBRA1-211ENST00000533727 DDX46Q7L014 1031 aaKnown RBP13.48□□□□□ -0.25
AMBRA1-211ENST00000533727 DNAAF4Q8WXU2 420 aa13.48□□□□□ -0.25
AMBRA1-211ENST00000533727 NLRP1Q9C000 1473 aa13.48□□□□□ -0.25
AMBRA1-211ENST00000533727 PCDH11XQ9BZA7 1347 aa13.47□□□□□ -0.25
AMBRA1-211ENST00000533727 PCDH11YQ9BZA8 1340 aa13.47□□□□□ -0.25
AMBRA1-211ENST00000533727 MYD88Q99836 296 aa13.47□□□□□ -0.25
AMBRA1-211ENST00000533727 CEP89Q96ST8 783 aa13.47□□□□□ -0.25
AMBRA1-211ENST00000533727 RAI14Q9P0K7 980 aa13.47□□□□□ -0.25
AMBRA1-211ENST00000533727 SLC5A1P13866 664 aa13.47□□□□□ -0.25
AMBRA1-211ENST00000533727 FOXD4L1Q9NU39 408 aa13.47□□□□□ -0.25
AMBRA1-211ENST00000533727 SMC3Q9UQE7 1217 aa13.47□□□□□ -0.25
AMBRA1-211ENST00000533727 DISP3Q9P2K9 1392 aa13.47□□□□□ -0.25
AMBRA1-211ENST00000533727 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
AMBRA1-211ENST00000533727 LRP2BPQ9P2M1 347 aa13.47□□□□□ -0.25
AMBRA1-211ENST00000533727 MCM2P49736 904 aa13.46□□□□□ -0.25
AMBRA1-211ENST00000533727 CDCA7LQ96GN5 454 aa13.46□□□□□ -0.25
AMBRA1-211ENST00000533727 ANKIB1Q9P2G1 1089 aa13.46□□□□□ -0.25
AMBRA1-211ENST00000533727 MAGI3Q5TCQ9 1506 aa13.46□□□□□ -0.25
AMBRA1-211ENST00000533727 YEATS2Q9ULM3 1422 aa13.46□□□□□ -0.25
AMBRA1-211ENST00000533727 KDM5DQ9BY66 1539 aa13.46□□□□□ -0.25
AMBRA1-211ENST00000533727 SLFN5Q08AF3 891 aa13.46□□□□□ -0.25
AMBRA1-211ENST00000533727 ZSCAN29Q8IWY8 852 aaPredicted RBP13.46□□□□□ -0.25
AMBRA1-211ENST00000533727 SIL1Q9H173 461 aa13.46□□□□□ -0.25
AMBRA1-211ENST00000533727 PIK3R4Q99570 1358 aa13.46□□□□□ -0.25
AMBRA1-211ENST00000533727 ASXL1Q8IXJ9 1541 aa13.46□□□□□ -0.25
AMBRA1-211ENST00000533727 IP6K1Q92551 441 aa13.46□□□□□ -0.26
AMBRA1-211ENST00000533727 AACSQ86V21 672 aa13.46□□□□□ -0.26
AMBRA1-211ENST00000533727 MAP7D2Q96T17 732 aa13.46□□□□□ -0.26
AMBRA1-211ENST00000533727 CWC25Q9NXE8 425 aaPredicted RBP13.45□□□□□ -0.26
AMBRA1-211ENST00000533727 ANKRD20A12PQ8NF67 263 aa13.45□□□□□ -0.26
AMBRA1-211ENST00000533727 KIF1BPQ96EK5 621 aa13.45□□□□□ -0.26
AMBRA1-211ENST00000533727 DCAF5Q96JK2 942 aa13.45□□□□□ -0.26
AMBRA1-211ENST00000533727 NYXQ9GZU5 481 aa13.45□□□□□ -0.26
AMBRA1-211ENST00000533727 NPHP4O75161 1426 aaPredicted RBP13.45□□□□□ -0.26
AMBRA1-211ENST00000533727 ATP6V1AP38606 617 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms