RNA–Protein interactions for RNA: ENST00000532993.5

ARHGEF12-213, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF12, Length 8,753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-213ENST00000532993 BCAR3O75815 825 aa7.06□□□□□ -1.28
ARHGEF12-213ENST00000532993 UVSSAQ2YD98 709 aa7.06□□□□□ -1.28
ARHGEF12-213ENST00000532993 TSR2Q969E8 191 aaKnown RBP7.06□□□□□ -1.28
ARHGEF12-213ENST00000532993 BRMS1Q9HCU9 246 aa7.06□□□□□ -1.28
ARHGEF12-213ENST00000532993 COL17A1Q9UMD9 1497 aaPredicted RBP7.06□□□□□ -1.28
ARHGEF12-213ENST00000532993 SKAP1Q86WV1 359 aa7.06□□□□□ -1.28
ARHGEF12-213ENST00000532993 MARCH6O60337 910 aa7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 RNF214Q8ND24 703 aa7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 PUS7Q96PZ0 661 aaKnown RBP7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 BACH2Q9BYV9 841 aa7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 NBPF8Q3BBV2 869 aa7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 CCDC27Q2M243 656 aa7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 TSPYL4Q9UJ04 414 aa7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 INTS3Q68E01 1043 aaKnown RBP7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 IPO4Q8TEX9 1081 aaKnown RBP7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 ZNF428Q96B54 188 aa7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 SUDS3Q9H7L9 328 aaPredicted RBP7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 BRD4O60885 1362 aaPredicted RBP7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 ERBINQ96RT1 1412 aa7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 EXOSC9Q06265 439 aaKnown RBP7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 RPAINQ86UA6 219 aa7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 CCDC50Q8IVM0 306 aa7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 CPSF2Q9P2I0 782 aaKnown RBP7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 RAD21O60216 631 aa7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 CCDC38Q502W7 563 aa7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 FMNL3Q8IVF7 1028 aa7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 TTC5Q8N0Z6 440 aa7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 SYNMO15061 1565 aa7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 FYB1O15117 783 aa7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 C9orf78Q9NZ63 289 aaPredicted RBP7.05□□□□□ -1.28
ARHGEF12-213ENST00000532993 DEPDC5O75140 1603 aa7.04□□□□□ -1.28
ARHGEF12-213ENST00000532993 LUC7LQ9NQ29 371 aaKnown RBP7.04□□□□□ -1.28
ARHGEF12-213ENST00000532993 ZNF521Q96K83 1311 aa7.04□□□□□ -1.28
ARHGEF12-213ENST00000532993 IQGAP3Q86VI3 1631 aa7.04□□□□□ -1.28
ARHGEF12-213ENST00000532993 TEFQ10587 303 aa7.04□□□□□ -1.28
ARHGEF12-213ENST00000532993 SH2D4BQ5SQS7 431 aa7.04□□□□□ -1.28
ARHGEF12-213ENST00000532993 SLC26A8Q96RN1 970 aa7.04□□□□□ -1.28
ARHGEF12-213ENST00000532993 FAM135AQ9P2D6 1515 aa7.04□□□□□ -1.28
ARHGEF12-213ENST00000532993 PRAG1Q86YV5 1406 aa7.04□□□□□ -1.28
ARHGEF12-213ENST00000532993 SHTN1A0MZ66 631 aa7.04□□□□□ -1.28
ARHGEF12-213ENST00000532993 AIMP1Q12904 312 aaKnown RBP7.04□□□□□ -1.28
ARHGEF12-213ENST00000532993 SMC3Q9UQE7 1217 aa7.04□□□□□ -1.28
ARHGEF12-213ENST00000532993 PPFIA3O75145 1194 aa7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 TDO2P48775 406 aa7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 GNAI1P63096 354 aa7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 LRRFIP1Q32MZ4 808 aaKnown RBP7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 MYCBPQ99417 103 aaPredicted RBP7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 EFCC1Q9HA90 598 aa7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 TCP11L2Q8N4U5 519 aa7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 PHF23Q9BUL5 403 aaPredicted RBP7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 BLMP54132 1417 aaPredicted RBP7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 G3V3G9 751 aa7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 NF2P35240 595 aa7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 DCAF8Q5TAQ9 597 aa7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 USH1CQ9Y6N9 552 aa7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 MYOM2P54296 1465 aa7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 PREX2Q70Z35 1606 aa7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 MPHOSPH10O00566 681 aaKnown RBP7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 ZKSCAN1P17029 563 aaPredicted RBP7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 TMCO3Q6UWJ1 677 aa7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 SPATA24Q86W54 205 aa7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 PCMTD1Q96MG8 357 aaPredicted RBP7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 KIF1CO43896 1103 aaKnown RBP7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 MAP4K4O95819 1239 aaPredicted RBP7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 SPATS2Q86XZ4 545 aaKnown RBP7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 DNAJC5BQ9UF47 199 aa7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 PDE3AQ14432 1141 aa7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 NFXL1Q6ZNB6 911 aa7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 IFT57Q9NWB7 429 aa7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 NOB1Q9ULX3 412 aaKnown RBP7.03□□□□□ -1.28
ARHGEF12-213ENST00000532993 RBM26Q5T8P6 1007 aaKnown RBP7.02□□□□□ -1.29
ARHGEF12-213ENST00000532993 RUFY2Q8WXA3 655 aa7.02□□□□□ -1.29
ARHGEF12-213ENST00000532993 RASSF4Q9H2L5 321 aa7.02□□□□□ -1.29
ARHGEF12-213ENST00000532993 PRG4Q92954 1404 aaPredicted RBP7.02□□□□□ -1.29
ARHGEF12-213ENST00000532993 GTF2E1P29083 439 aaPredicted RBP7.02□□□□□ -1.29
ARHGEF12-213ENST00000532993 GTF2A1P52655 376 aaPredicted RBP7.02□□□□□ -1.29
ARHGEF12-213ENST00000532993 CFAP70Q5T0N1 1121 aa7.02□□□□□ -1.29
ARHGEF12-213ENST00000532993 G3BP1Q13283 466 aaKnown RBP eCLIP7.02□□□□□ -1.29
ARHGEF12-213ENST00000532993 CBX1P83916 185 aa7.02□□□□□ -1.29
ARHGEF12-213ENST00000532993 MPNDQ8N594 471 aa7.02□□□□□ -1.29
ARHGEF12-213ENST00000532993 ADGBQ8N7X0 1667 aa7.02□□□□□ -1.29
ARHGEF12-213ENST00000532993 CDC42BPAQ5VT25 1732 aa7.02□□□□□ -1.29
ARHGEF12-213ENST00000532993 OFD1O75665 1012 aa7.02□□□□□ -1.29
ARHGEF12-213ENST00000532993 MRVI1Q9Y6F6 885 aa7.02□□□□□ -1.29
ARHGEF12-213ENST00000532993 PLB1Q6P1J6 1458 aa7.01□□□□□ -1.29
ARHGEF12-213ENST00000532993 PLCH2O75038 1416 aa7.01□□□□□ -1.29
ARHGEF12-213ENST00000532993 ERICH4A6NGS2 130 aa7.01□□□□□ -1.29
ARHGEF12-213ENST00000532993 MCM4P33991 863 aa7.01□□□□□ -1.29
ARHGEF12-213ENST00000532993 CPLX1O14810 134 aa7.01□□□□□ -1.29
ARHGEF12-213ENST00000532993 KIF18AQ8NI77 898 aa7.01□□□□□ -1.29
ARHGEF12-213ENST00000532993 TRIM34Q9BYJ4 488 aa7.01□□□□□ -1.29
ARHGEF12-213ENST00000532993 CCDC192P0DO97 292 aa7.01□□□□□ -1.29
ARHGEF12-213ENST00000532993 TRIM29Q14134 588 aa7.01□□□□□ -1.29
ARHGEF12-213ENST00000532993 SYNE3Q6ZMZ3 975 aa7.01□□□□□ -1.29
ARHGEF12-213ENST00000532993 FAM114A1Q8IWE2 563 aa7.01□□□□□ -1.29
ARHGEF12-213ENST00000532993 TESK2Q96S53 571 aa7.01□□□□□ -1.29
ARHGEF12-213ENST00000532993 EZRP15311 586 aaKnown RBP7.01□□□□□ -1.29
ARHGEF12-213ENST00000532993 DNAJC21Q5F1R6 531 aaKnown RBP7.01□□□□□ -1.29
ARHGEF12-213ENST00000532993 NEUROD6Q96NK8 337 aa7.01□□□□□ -1.29
ARHGEF12-213ENST00000532993 SLMAPQ14BN4 828 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms