RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 HOXC9P31274 260 aa15.7■□□□□ 0.1
CHD7-211ENST00000532149 FTSJ3Q8IY81 847 aaKnown RBP15.7■□□□□ 0.1
CHD7-211ENST00000532149 DZIP1LQ8IYY4 767 aaKnown RBP15.7■□□□□ 0.1
CHD7-211ENST00000532149 RTF1Q92541 710 aaKnown RBP15.7■□□□□ 0.1
CHD7-211ENST00000532149 CLUAP1Q96AJ1 413 aa15.7■□□□□ 0.1
CHD7-211ENST00000532149 SMC4Q9NTJ3 1288 aa15.7■□□□□ 0.1
CHD7-211ENST00000532149 DDX19BQ9UMR2 479 aa15.7■□□□□ 0.1
CHD7-211ENST00000532149 RBM19Q9Y4C8 960 aaKnown RBP15.7■□□□□ 0.1
CHD7-211ENST00000532149 PEAK1Q9H792 1746 aa15.7■□□□□ 0.1
CHD7-211ENST00000532149 KDM2BQ8NHM5 1336 aa15.69■□□□□ 0.1
CHD7-211ENST00000532149 ATF7IPQ6VMQ6 1270 aa15.69■□□□□ 0.1
CHD7-211ENST00000532149 C1orf167Q5SNV9 1468 aa15.69■□□□□ 0.1
CHD7-211ENST00000532149 DLG5Q8TDM6 1919 aa15.68■□□□□ 0.1
CHD7-211ENST00000532149 FBLN1P23142 703 aa15.68■□□□□ 0.1
CHD7-211ENST00000532149 MVPQ14764 893 aaKnown RBP15.67■□□□□ 0.1
CHD7-211ENST00000532149 C20orf194Q5TEA3 1177 aa15.67■□□□□ 0.1
CHD7-211ENST00000532149 FRAT1Q92837 279 aaPredicted RBP15.67■□□□□ 0.1
CHD7-211ENST00000532149 RWDD1Q9H446 243 aaPredicted RBP15.67■□□□□ 0.1
CHD7-211ENST00000532149 MARF1Q9Y4F3 1742 aaKnown RBP15.67■□□□□ 0.1
CHD7-211ENST00000532149 SLIT3O75094 1523 aa15.67■□□□□ 0.1
CHD7-211ENST00000532149 ABCC6O95255 1503 aa15.67■□□□□ 0.1
CHD7-211ENST00000532149 MSH6P52701 1360 aa15.66■□□□□ 0.1
CHD7-211ENST00000532149 CHL1O00533 1208 aa15.66■□□□□ 0.1
CHD7-211ENST00000532149 TSR2Q969E8 191 aaKnown RBP15.66■□□□□ 0.1
CHD7-211ENST00000532149 NFAT5O94916 1531 aa15.66■□□□□ 0.1
CHD7-211ENST00000532149 USP19O94966 1318 aa15.66■□□□□ 0.1
CHD7-211ENST00000532149 NPHP3Q7Z494 1330 aa15.66■□□□□ 0.1
CHD7-211ENST00000532149 CD44P16070 742 aaKnown RBP15.65■□□□□ 0.1
CHD7-211ENST00000532149 EYA1Q99502 592 aa15.65■□□□□ 0.1
CHD7-211ENST00000532149 VAMP4O75379 141 aa15.64■□□□□ 0.09
CHD7-211ENST00000532149 AMOTQ4VCS5 1084 aa15.64■□□□□ 0.09
CHD7-211ENST00000532149 KRT28Q7Z3Y7 464 aa15.64■□□□□ 0.09
CHD7-211ENST00000532149 SSH1Q8WYL5 1049 aa15.64■□□□□ 0.09
CHD7-211ENST00000532149 API5Q9BZZ5 524 aaKnown RBP15.64■□□□□ 0.09
CHD7-211ENST00000532149 TMEM94Q12767 1356 aa15.63■□□□□ 0.09
CHD7-211ENST00000532149 TWISTNBQ3B726 338 aaPredicted RBP15.63■□□□□ 0.09
CHD7-211ENST00000532149 MBIPQ9NS73 344 aa15.63■□□□□ 0.09
CHD7-211ENST00000532149 TRPM3Q9HCF6 1732 aaPredicted RBP15.63■□□□□ 0.09
CHD7-211ENST00000532149 LTN1O94822 1766 aa15.62■□□□□ 0.09
CHD7-211ENST00000532149 GNAT3A8MTJ3 354 aa15.62■□□□□ 0.09
CHD7-211ENST00000532149 GCP02774 474 aa15.62■□□□□ 0.09
CHD7-211ENST00000532149 ARHGEF25Q86VW2 580 aa15.62■□□□□ 0.09
CHD7-211ENST00000532149 LMTK3Q96Q04 1460 aa15.62■□□□□ 0.09
CHD7-211ENST00000532149 COG6Q9Y2V7 657 aa15.61■□□□□ 0.09
CHD7-211ENST00000532149 LAS1LQ9Y4W2 734 aaKnown RBP15.61■□□□□ 0.09
CHD7-211ENST00000532149 NCAPD2Q15021 1401 aa15.6■□□□□ 0.09
CHD7-211ENST00000532149 FOXO3O43524 673 aa15.6■□□□□ 0.09
CHD7-211ENST00000532149 AEBP1Q8IUX7 1158 aa15.6■□□□□ 0.09
CHD7-211ENST00000532149 PANK1Q8TE04 598 aa15.6■□□□□ 0.09
CHD7-211ENST00000532149 NOB1Q9ULX3 412 aaKnown RBP15.6■□□□□ 0.09
CHD7-211ENST00000532149 PTPRCP08575 1304 aa15.6■□□□□ 0.09
CHD7-211ENST00000532149 OVOS2A0A0G2JMS6 1433 aa15.6■□□□□ 0.09
CHD7-211ENST00000532149 TRIM27P14373 513 aa15.59■□□□□ 0.09
CHD7-211ENST00000532149 HDAC1Q13547 482 aaPredicted RBP15.59■□□□□ 0.09
CHD7-211ENST00000532149 ORAI2Q96SN7 254 aa15.59■□□□□ 0.09
CHD7-211ENST00000532149 CRB1P82279 1406 aa15.59■□□□□ 0.09
CHD7-211ENST00000532149 CACNA1FO60840 1977 aa15.58■□□□□ 0.09
CHD7-211ENST00000532149 MTHFSDQ2M296 383 aaKnown RBP15.58■□□□□ 0.08
CHD7-211ENST00000532149 PLEKHO1Q53GL0 409 aaPredicted RBP15.58■□□□□ 0.08
CHD7-211ENST00000532149 PROM2Q8N271 834 aa15.58■□□□□ 0.08
CHD7-211ENST00000532149 MRPL50Q8N5N7 158 aaKnown RBP15.58■□□□□ 0.08
CHD7-211ENST00000532149 MAP3K5Q99683 1374 aa15.58■□□□□ 0.08
CHD7-211ENST00000532149 ALS2Q96Q42 1657 aa15.57■□□□□ 0.08
CHD7-211ENST00000532149 SOX12O15370 315 aa15.57■□□□□ 0.08
CHD7-211ENST00000532149 HOXB7P09629 217 aa15.57■□□□□ 0.08
CHD7-211ENST00000532149 TAF7Q15545 349 aaPredicted RBP15.56■□□□□ 0.08
CHD7-211ENST00000532149 EIF5BO60841 1220 aaKnown RBP15.55■□□□□ 0.08
CHD7-211ENST00000532149 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.55■□□□□ 0.081e-6■■■■■ 29.5
CHD7-211ENST00000532149 FAM208AQ9UK61 1670 aaKnown RBP15.54■□□□□ 0.08
CHD7-211ENST00000532149 LRRC37A3O60309 1634 aa15.54■□□□□ 0.08
CHD7-211ENST00000532149 ANP32AP39687 249 aaKnown RBP15.54■□□□□ 0.08
CHD7-211ENST00000532149 AKAP4Q5JQC9 854 aa15.54■□□□□ 0.08
CHD7-211ENST00000532149 ITPRIPQ8IWB1 547 aa15.54■□□□□ 0.08
CHD7-211ENST00000532149 BCL2L13Q9BXK5 485 aa15.54■□□□□ 0.08
CHD7-211ENST00000532149 BACH2Q9BYV9 841 aa15.54■□□□□ 0.08
CHD7-211ENST00000532149 ZBTB40Q9NUA8 1239 aa15.54■□□□□ 0.08
CHD7-211ENST00000532149 TSPYL4Q9UJ04 414 aa15.54■□□□□ 0.08
CHD7-211ENST00000532149 CAMTA1Q9Y6Y1 1673 aa15.54■□□□□ 0.08
CHD7-211ENST00000532149 MED1Q15648 1581 aaPredicted RBP15.53■□□□□ 0.08
CHD7-211ENST00000532149 TNS3Q68CZ2 1445 aa15.53■□□□□ 0.08
CHD7-211ENST00000532149 CPDO75976 1380 aa15.53■□□□□ 0.08
CHD7-211ENST00000532149 ABCC4O15439 1325 aa15.53■□□□□ 0.08
CHD7-211ENST00000532149 RLBP1P12271 317 aa15.53■□□□□ 0.08
CHD7-211ENST00000532149 NUTM2GQ5VZR2 741 aa15.53■□□□□ 0.08
CHD7-211ENST00000532149 STRCP1A6NGW2 1772 aa15.53■□□□□ 0.08
CHD7-211ENST00000532149 CEMIPQ8WUJ3 1361 aa15.52■□□□□ 0.08
CHD7-211ENST00000532149 KDM4FA0A1W2PPD8 638 aa15.52■□□□□ 0.08
CHD7-211ENST00000532149 PDE4AP27815 886 aa15.52■□□□□ 0.08
CHD7-211ENST00000532149 FAM161AQ3B820 660 aa15.52■□□□□ 0.08
CHD7-211ENST00000532149 CCDC30Q5VVM6 783 aa15.52■□□□□ 0.08
CHD7-211ENST00000532149 C8orf58Q8NAV2 365 aa15.52■□□□□ 0.08
CHD7-211ENST00000532149 STK31Q9BXU1 1019 aa15.52■□□□□ 0.08
CHD7-211ENST00000532149 STRCQ7RTU9 1775 aa15.52■□□□□ 0.07
CHD7-211ENST00000532149 FAM83GA6ND36 823 aa15.51■□□□□ 0.07
CHD7-211ENST00000532149 POTEIP0CG38 1075 aa15.51■□□□□ 0.07
CHD7-211ENST00000532149 MNX1P50219 401 aaPredicted RBP15.51■□□□□ 0.07
CHD7-211ENST00000532149 INTS3Q68E01 1043 aaKnown RBP15.51■□□□□ 0.07
CHD7-211ENST00000532149 MCM10Q7L590 875 aa15.51■□□□□ 0.07
CHD7-211ENST00000532149 GCC1Q96CN9 775 aa15.51■□□□□ 0.07
CHD7-211ENST00000532149 THUMPD2Q9BTF0 503 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms