RNA–Protein interactions for RNA: ENST00000529207.5

SYVN1-211, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-211ENST00000529207 SMG6Q86US8 1419 aaKnown RBP12.97□□□□□ -0.33
SYVN1-211ENST00000529207 QSER1Q2KHR3 1735 aa12.97□□□□□ -0.33
SYVN1-211ENST00000529207 MSH5O43196 834 aa12.97□□□□□ -0.33
SYVN1-211ENST00000529207 LRRC4BQ9NT99 713 aa12.97□□□□□ -0.33
SYVN1-211ENST00000529207 RGPD2P0DJD1 1756 aa12.97□□□□□ -0.33
SYVN1-211ENST00000529207 SHANK3Q9BYB0 1731 aa12.96□□□□□ -0.33
SYVN1-211ENST00000529207 MEGF6O75095 1541 aa12.96□□□□□ -0.33
SYVN1-211ENST00000529207 USP47Q96K76 1375 aa12.95□□□□□ -0.34
SYVN1-211ENST00000529207 MAP3K5Q99683 1374 aa12.95□□□□□ -0.34
SYVN1-211ENST00000529207 KIF20BQ96Q89 1820 aa12.95□□□□□ -0.34
SYVN1-211ENST00000529207 UTRNP46939 3433 aa12.95□□□□□ -0.34
SYVN1-211ENST00000529207 GRIN3BO60391 1043 aa12.95□□□□□ -0.34
SYVN1-211ENST00000529207 PRIM1P49642 420 aaKnown RBP12.95□□□□□ -0.34
SYVN1-211ENST00000529207 TMF1P82094 1093 aa12.95□□□□□ -0.34
SYVN1-211ENST00000529207 ZCRB1Q8TBF4 217 aaKnown RBP12.95□□□□□ -0.34
SYVN1-211ENST00000529207 GPBP1L1Q9HC44 474 aaPredicted RBP12.95□□□□□ -0.34
SYVN1-211ENST00000529207 LY75O60449 1722 aa12.94□□□□□ -0.34
SYVN1-211ENST00000529207 NLGN2Q8NFZ4 835 aa12.94□□□□□ -0.34
SYVN1-211ENST00000529207 SLC16A10Q8TF71 515 aa12.94□□□□□ -0.34
SYVN1-211ENST00000529207 AKT1S1Q96B36 256 aa12.94□□□□□ -0.34
SYVN1-211ENST00000529207 TFCP2L1Q9NZI6 479 aa12.94□□□□□ -0.34
SYVN1-211ENST00000529207 CGNL1Q0VF96 1302 aa12.93□□□□□ -0.34
SYVN1-211ENST00000529207 TUBGCP6Q96RT7 1819 aa12.93□□□□□ -0.34
SYVN1-211ENST00000529207 FBLN1P23142 703 aa12.93□□□□□ -0.34
SYVN1-211ENST00000529207 RRS1Q15050 365 aaKnown RBP12.93□□□□□ -0.34
SYVN1-211ENST00000529207 RAPGEF4Q8WZA2 1011 aa12.93□□□□□ -0.34
SYVN1-211ENST00000529207 GGNBP2Q9H3C7 697 aa12.93□□□□□ -0.34
SYVN1-211ENST00000529207 NSD2O96028 1365 aa12.93□□□□□ -0.34
SYVN1-211ENST00000529207 CHD4Q14839 1912 aa12.92□□□□□ -0.34
SYVN1-211ENST00000529207 HSPA6P17066 643 aa12.92□□□□□ -0.34
SYVN1-211ENST00000529207 CDCA8Q53HL2 280 aa12.92□□□□□ -0.34
SYVN1-211ENST00000529207 PNPLA7Q6ZV29 1317 aa12.91□□□□□ -0.34
SYVN1-211ENST00000529207 FYB1O15117 783 aa12.91□□□□□ -0.34
SYVN1-211ENST00000529207 KCNQ4P56696 695 aa12.91□□□□□ -0.34
SYVN1-211ENST00000529207 USHBP1Q8N6Y0 703 aa12.91□□□□□ -0.34
SYVN1-211ENST00000529207 CCNL1Q9UK58 526 aaPredicted RBP12.91□□□□□ -0.34
SYVN1-211ENST00000529207 FLT4P35916 1363 aa12.91□□□□□ -0.34
SYVN1-211ENST00000529207 COL24A1Q17RW2 1714 aa12.91□□□□□ -0.34
SYVN1-211ENST00000529207 CAPN15O75808 1086 aa12.9□□□□□ -0.34
SYVN1-211ENST00000529207 NBPF6Q5VWK0 638 aa12.9□□□□□ -0.34
SYVN1-211ENST00000529207 NBPF4Q96M43 638 aa12.9□□□□□ -0.34
SYVN1-211ENST00000529207 INSRP06213 1382 aa12.9□□□□□ -0.34
SYVN1-211ENST00000529207 KIF24Q5T7B8 1368 aa12.9□□□□□ -0.34
SYVN1-211ENST00000529207 PCDH11XQ9BZA7 1347 aa12.89□□□□□ -0.35
SYVN1-211ENST00000529207 PCDH11YQ9BZA8 1340 aa12.89□□□□□ -0.35
SYVN1-211ENST00000529207 YBX3P16989 372 aaKnown RBP eCLIP12.89□□□□□ -0.35
SYVN1-211ENST00000529207 TATP17735 454 aaPredicted RBP12.89□□□□□ -0.35
SYVN1-211ENST00000529207 C5P01031 1676 aa12.89□□□□□ -0.35
SYVN1-211ENST00000529207 HMGB2P26583 209 aaKnown RBP12.87□□□□□ -0.35
SYVN1-211ENST00000529207 HSP90AB2PQ58FF8 381 aa12.87□□□□□ -0.35
SYVN1-211ENST00000529207 WWC3Q9ULE0 1092 aa12.87□□□□□ -0.35
SYVN1-211ENST00000529207 NSD3Q9BZ95 1437 aa12.87□□□□□ -0.35
SYVN1-211ENST00000529207 ATP10DQ9P241 1426 aa12.87□□□□□ -0.35
SYVN1-211ENST00000529207 TRIM26Q12899 539 aaPredicted RBP12.86□□□□□ -0.35
SYVN1-211ENST00000529207 MSL1Q68DK7 614 aa12.86□□□□□ -0.35
SYVN1-211ENST00000529207 GOLGB1Q14789 3259 aaKnown RBP12.86□□□□□ -0.35
SYVN1-211ENST00000529207 PKD1L3Q7Z443 1732 aa12.85□□□□□ -0.35
SYVN1-211ENST00000529207 PALLDQ8WX93 1383 aa12.85□□□□□ -0.35
SYVN1-211ENST00000529207 ANKRD26Q9UPS8 1709 aa12.85□□□□□ -0.35
SYVN1-211ENST00000529207 MPRIPQ6WCQ1 1025 aa12.84□□□□□ -0.35
SYVN1-211ENST00000529207 TOGARAM1Q9Y4F4 1720 aa12.84□□□□□ -0.35
SYVN1-211ENST00000529207 TAF1LQ8IZX4 1826 aa12.83□□□□□ -0.35
SYVN1-211ENST00000529207 PPM1GO15355 546 aaPredicted RBP12.83□□□□□ -0.36
SYVN1-211ENST00000529207 COL23A1Q86Y22 540 aaPredicted RBP12.83□□□□□ -0.36
SYVN1-211ENST00000529207 CARD14Q9BXL6 1004 aa12.83□□□□□ -0.36
SYVN1-211ENST00000529207 EMILIN1Q9Y6C2 1016 aa12.83□□□□□ -0.36
SYVN1-211ENST00000529207 ITGB4P16144 1822 aa12.83□□□□□ -0.36
SYVN1-211ENST00000529207 CYP27B1O15528 508 aa12.82□□□□□ -0.36
SYVN1-211ENST00000529207 FLAD1Q8NFF5 587 aa12.82□□□□□ -0.36
SYVN1-211ENST00000529207 SMARCC1Q92922 1105 aaPredicted RBP12.82□□□□□ -0.36
SYVN1-211ENST00000529207 C4BP0C0L5 1744 aa12.82□□□□□ -0.36
SYVN1-211ENST00000529207 NCAPD2Q15021 1401 aa12.81□□□□□ -0.36
SYVN1-211ENST00000529207 AK7Q96M32 723 aa12.81□□□□□ -0.36
SYVN1-211ENST00000529207 SPG7Q9UQ90 795 aa12.81□□□□□ -0.36
SYVN1-211ENST00000529207 APLP1P51693 650 aa12.79□□□□□ -0.36
SYVN1-211ENST00000529207 TIMELESSQ9UNS1 1208 aa12.79□□□□□ -0.36
SYVN1-211ENST00000529207 WASHC2AQ641Q2 1341 aa12.79□□□□□ -0.36
SYVN1-211ENST00000529207 MAP2P11137 1827 aaKnown RBP12.78□□□□□ -0.36
SYVN1-211ENST00000529207 PIGBQ92521 554 aa12.78□□□□□ -0.36
SYVN1-211ENST00000529207 POLR3GLQ9BT43 218 aa12.78□□□□□ -0.36
SYVN1-211ENST00000529207 CD2APQ9Y5K6 639 aa12.78□□□□□ -0.36
SYVN1-211ENST00000529207 UBR3Q6ZT12 1888 aa12.78□□□□□ -0.36
SYVN1-211ENST00000529207 PHF14O94880 888 aa12.77□□□□□ -0.37
SYVN1-211ENST00000529207 NKX1-1Q15270 411 aaPredicted RBP12.77□□□□□ -0.37
SYVN1-211ENST00000529207 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.37
SYVN1-211ENST00000529207 TMOD3Q9NYL9 352 aa12.77□□□□□ -0.37
SYVN1-211ENST00000529207 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.76□□□□□ -0.37
SYVN1-211ENST00000529207 EYA1Q99502 592 aa12.76□□□□□ -0.37
SYVN1-211ENST00000529207 LOC102724428A0A0B4J2F2 783 aa12.75□□□□□ -0.37
SYVN1-211ENST00000529207 KIF3CO14782 793 aa12.75□□□□□ -0.37
SYVN1-211ENST00000529207 SIK1P57059 783 aa12.75□□□□□ -0.37
SYVN1-211ENST00000529207 COL13A1Q5TAT6 717 aaPredicted RBP12.75□□□□□ -0.37
SYVN1-211ENST00000529207 TNS4Q8IZW8 715 aa12.75□□□□□ -0.37
SYVN1-211ENST00000529207 CLSPNQ9HAW4 1339 aa12.75□□□□□ -0.37
SYVN1-211ENST00000529207 POLKQ9UBT6 870 aa12.75□□□□□ -0.37
SYVN1-211ENST00000529207 CEP350Q5VT06 3117 aa12.74□□□□□ -0.37
SYVN1-211ENST00000529207 PLEKHG2Q9H7P9 1386 aa12.74□□□□□ -0.37
SYVN1-211ENST00000529207 PHKG2P15735 406 aa12.74□□□□□ -0.37
SYVN1-211ENST00000529207 SSFA2P28290 1259 aa12.74□□□□□ -0.37
SYVN1-211ENST00000529207 TNNT2P45379 298 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms