RNA–Protein interactions for RNA: ENST00000525812.1

RPUSD4-202, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-202ENST00000525812 YBX3P16989 372 aaKnown RBP eCLIP10.51□□□□□ -0.73
RPUSD4-202ENST00000525812 NLGN2Q8NFZ4 835 aa10.51□□□□□ -0.73
RPUSD4-202ENST00000525812 HOXC9P31274 260 aa10.5□□□□□ -0.73
RPUSD4-202ENST00000525812 SIN3AQ96ST3 1273 aa10.5□□□□□ -0.73
RPUSD4-202ENST00000525812 CCNL1Q9UK58 526 aaPredicted RBP10.49□□□□□ -0.73
RPUSD4-202ENST00000525812 MAP3K19Q56UN5 1328 aa10.49□□□□□ -0.73
RPUSD4-202ENST00000525812 LY75O60449 1722 aa10.48□□□□□ -0.73
RPUSD4-202ENST00000525812 TMC1Q8TDI8 760 aa10.48□□□□□ -0.73
RPUSD4-202ENST00000525812 COG3Q96JB2 828 aa10.48□□□□□ -0.73
RPUSD4-202ENST00000525812 CARD11Q9BXL7 1154 aa10.48□□□□□ -0.73
RPUSD4-202ENST00000525812 A0A1W2PP64 1363 aa10.48□□□□□ -0.73
RPUSD4-202ENST00000525812 SHANK3Q9BYB0 1731 aa10.47□□□□□ -0.73
RPUSD4-202ENST00000525812 HSPA6P17066 643 aa10.47□□□□□ -0.73
RPUSD4-202ENST00000525812 NBPF6Q5VWK0 638 aa10.47□□□□□ -0.73
RPUSD4-202ENST00000525812 NBPF4Q96M43 638 aa10.47□□□□□ -0.73
RPUSD4-202ENST00000525812 TESK2Q96S53 571 aa10.47□□□□□ -0.73
RPUSD4-202ENST00000525812 RTL1A6NKG5 1358 aa10.47□□□□□ -0.73
RPUSD4-202ENST00000525812 ADCY9O60503 1353 aa10.47□□□□□ -0.73
RPUSD4-202ENST00000525812 KIF24Q5T7B8 1368 aa10.47□□□□□ -0.73
RPUSD4-202ENST00000525812 USP47Q96K76 1375 aa10.47□□□□□ -0.73
RPUSD4-202ENST00000525812 FAM208AQ9UK61 1670 aaKnown RBP10.47□□□□□ -0.73
RPUSD4-202ENST00000525812 AMPHP49418 695 aa10.46□□□□□ -0.73
RPUSD4-202ENST00000525812 KCNQ4P56696 695 aa10.46□□□□□ -0.73
RPUSD4-202ENST00000525812 NKX1-1Q15270 411 aaPredicted RBP10.46□□□□□ -0.73
RPUSD4-202ENST00000525812 SMARCC1Q92922 1105 aaPredicted RBP10.46□□□□□ -0.73
RPUSD4-202ENST00000525812 SYTL4Q96C24 671 aaPredicted RBP10.46□□□□□ -0.73
RPUSD4-202ENST00000525812 LTN1O94822 1766 aa10.45□□□□□ -0.74
RPUSD4-202ENST00000525812 GPBP1L1Q9HC44 474 aaPredicted RBP10.45□□□□□ -0.74
RPUSD4-202ENST00000525812 ATP10DQ9P241 1426 aa10.44□□□□□ -0.74
RPUSD4-202ENST00000525812 FYB1O15117 783 aa10.44□□□□□ -0.74
RPUSD4-202ENST00000525812 KLHL34Q8N239 644 aa10.44□□□□□ -0.74
RPUSD4-202ENST00000525812 RAPGEF4Q8WZA2 1011 aa10.44□□□□□ -0.74
RPUSD4-202ENST00000525812 LTV1Q96GA3 475 aaPredicted RBP10.44□□□□□ -0.74
RPUSD4-202ENST00000525812 MEGF6O75095 1541 aa10.43□□□□□ -0.74
RPUSD4-202ENST00000525812 INSRP06213 1382 aa10.43□□□□□ -0.74
RPUSD4-202ENST00000525812 NEUROD1Q13562 356 aa10.43□□□□□ -0.74
RPUSD4-202ENST00000525812 PELP1Q8IZL8 1130 aaKnown RBP10.43□□□□□ -0.74
RPUSD4-202ENST00000525812 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.43□□□□□ -0.74
RPUSD4-202ENST00000525812 PCDH11XQ9BZA7 1347 aa10.42□□□□□ -0.74
RPUSD4-202ENST00000525812 PCDH11YQ9BZA8 1340 aa10.42□□□□□ -0.74
RPUSD4-202ENST00000525812 KIF3CO14782 793 aa10.42□□□□□ -0.74
RPUSD4-202ENST00000525812 TATP17735 454 aaPredicted RBP10.42□□□□□ -0.74
RPUSD4-202ENST00000525812 SSFA2P28290 1259 aa10.42□□□□□ -0.74
RPUSD4-202ENST00000525812 NSD3Q9BZ95 1437 aa10.41□□□□□ -0.74
RPUSD4-202ENST00000525812 CYP27B1O15528 508 aa10.41□□□□□ -0.74
RPUSD4-202ENST00000525812 MSH5O43196 834 aa10.41□□□□□ -0.74
RPUSD4-202ENST00000525812 FBLN1P23142 703 aa10.41□□□□□ -0.74
RPUSD4-202ENST00000525812 DNAJC5GQ8N7S2 189 aa10.41□□□□□ -0.74
RPUSD4-202ENST00000525812 TUBGCP6Q96RT7 1819 aa10.41□□□□□ -0.74
RPUSD4-202ENST00000525812 NCAPD2Q15021 1401 aa10.41□□□□□ -0.74
RPUSD4-202ENST00000525812 PALLDQ8WX93 1383 aa10.4□□□□□ -0.74
RPUSD4-202ENST00000525812 PLEKHG2Q9H7P9 1386 aa10.4□□□□□ -0.74
RPUSD4-202ENST00000525812 ST20-MTHFSA0A0A6YYL1 179 aa10.4□□□□□ -0.74
RPUSD4-202ENST00000525812 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.39□□□□□ -0.75
RPUSD4-202ENST00000525812 APLP1P51693 650 aa10.39□□□□□ -0.75
RPUSD4-202ENST00000525812 TGFB2P61812 414 aa10.39□□□□□ -0.75
RPUSD4-202ENST00000525812 HSP90AB2PQ58FF8 381 aa10.39□□□□□ -0.75
RPUSD4-202ENST00000525812 MSL1Q68DK7 614 aa10.39□□□□□ -0.75
RPUSD4-202ENST00000525812 PIGBQ92521 554 aa10.39□□□□□ -0.75
RPUSD4-202ENST00000525812 FLT4P35916 1363 aa10.39□□□□□ -0.75
RPUSD4-202ENST00000525812 TONSLQ96HA7 1378 aa10.39□□□□□ -0.75
RPUSD4-202ENST00000525812 DOT1LQ8TEK3 1739 aa10.38□□□□□ -0.75
RPUSD4-202ENST00000525812 IGSF1Q8N6C5 1336 aa10.38□□□□□ -0.75
RPUSD4-202ENST00000525812 LOC102724428A0A0B4J2F2 783 aa10.38□□□□□ -0.75
RPUSD4-202ENST00000525812 TOMM70O94826 608 aa10.38□□□□□ -0.75
RPUSD4-202ENST00000525812 SIK1P57059 783 aa10.38□□□□□ -0.75
RPUSD4-202ENST00000525812 RRS1Q15050 365 aaKnown RBP10.38□□□□□ -0.75
RPUSD4-202ENST00000525812 MPRIPQ6WCQ1 1025 aa10.38□□□□□ -0.75
RPUSD4-202ENST00000525812 AMIGO3Q86WK7 504 aa10.38□□□□□ -0.75
RPUSD4-202ENST00000525812 AK7Q96M32 723 aa10.38□□□□□ -0.75
RPUSD4-202ENST00000525812 SMG6Q86US8 1419 aaKnown RBP10.38□□□□□ -0.75
RPUSD4-202ENST00000525812 CDCA8Q53HL2 280 aa10.37□□□□□ -0.75
RPUSD4-202ENST00000525812 RC3H1Q5TC82 1133 aaKnown RBP10.37□□□□□ -0.75
RPUSD4-202ENST00000525812 NLGN1Q8N2Q7 840 aa10.37□□□□□ -0.75
RPUSD4-202ENST00000525812 SPG7Q9UQ90 795 aa10.37□□□□□ -0.75
RPUSD4-202ENST00000525812 GGNBP2Q9H3C7 697 aa10.36□□□□□ -0.75
RPUSD4-202ENST00000525812 WASHC2AQ641Q2 1341 aa10.35□□□□□ -0.75
RPUSD4-202ENST00000525812 ADRA2BP18089 450 aa10.35□□□□□ -0.75
RPUSD4-202ENST00000525812 TMF1P82094 1093 aa10.35□□□□□ -0.75
RPUSD4-202ENST00000525812 USHBP1Q8N6Y0 703 aa10.35□□□□□ -0.75
RPUSD4-202ENST00000525812 CICQ96RK0 1608 aaPredicted RBP10.35□□□□□ -0.75
RPUSD4-202ENST00000525812 TAF1LQ8IZX4 1826 aa10.35□□□□□ -0.75
RPUSD4-202ENST00000525812 C5P01031 1676 aa10.34□□□□□ -0.75
RPUSD4-202ENST00000525812 C4BP0C0L5 1744 aa10.34□□□□□ -0.75
RPUSD4-202ENST00000525812 IFNL2Q8IZJ0 200 aa10.34□□□□□ -0.75
RPUSD4-202ENST00000525812 LINC00116Q8NCU8 138 aa10.34□□□□□ -0.75
RPUSD4-202ENST00000525812 MAP2P11137 1827 aaKnown RBP10.33□□□□□ -0.76
RPUSD4-202ENST00000525812 ERVV-2B6SEH9 535 aa10.33□□□□□ -0.76
RPUSD4-202ENST00000525812 ITPK1Q13572 414 aa10.33□□□□□ -0.76
RPUSD4-202ENST00000525812 JMYQ8N9B5 988 aa10.33□□□□□ -0.76
RPUSD4-202ENST00000525812 RBM46Q8TBY0 533 aaKnown RBP10.33□□□□□ -0.76
RPUSD4-202ENST00000525812 CARD14Q9BXL6 1004 aa10.33□□□□□ -0.76
RPUSD4-202ENST00000525812 ATG3Q9NT62 314 aa10.33□□□□□ -0.76
RPUSD4-202ENST00000525812 ASAP1Q9ULH1 1129 aa10.33□□□□□ -0.76
RPUSD4-202ENST00000525812 RGPD2P0DJD1 1756 aa10.33□□□□□ -0.76
RPUSD4-202ENST00000525812 UBR3Q6ZT12 1888 aa10.32□□□□□ -0.76
RPUSD4-202ENST00000525812 MMP10P09238 476 aa10.32□□□□□ -0.76
RPUSD4-202ENST00000525812 PHKG2P15735 406 aa10.32□□□□□ -0.76
RPUSD4-202ENST00000525812 KCNA3P22001 575 aa10.32□□□□□ -0.76
RPUSD4-202ENST00000525812 FSTL1Q12841 308 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms