RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 POLMQ9NP87 494 aaPredicted RBP11.58□□□□□ -0.56
COPB1-203ENST00000525214 TRIM52Q96A61 297 aa11.57□□□□□ -0.56
COPB1-203ENST00000525214 CHIC2Q9UKJ5 165 aa11.57□□□□□ -0.56
COPB1-203ENST00000525214 UBTFP17480 764 aaKnown RBP11.56□□□□□ -0.56
COPB1-203ENST00000525214 ERBB4Q15303 1308 aa11.56□□□□□ -0.56
COPB1-203ENST00000525214 PTSQ03393 145 aa11.55□□□□□ -0.56
COPB1-203ENST00000525214 SLFNL1Q499Z3 407 aa11.55□□□□□ -0.56
COPB1-203ENST00000525214 SLC16A10Q8TF71 515 aa11.55□□□□□ -0.56
COPB1-203ENST00000525214 PPFIA3O75145 1194 aa11.54□□□□□ -0.56
COPB1-203ENST00000525214 RNF135Q8IUD6 432 aa11.54□□□□□ -0.56
COPB1-203ENST00000525214 A0A1W2PRU2 124 aa11.53□□□□□ -0.56
COPB1-203ENST00000525214 RAD21O60216 631 aa11.53□□□□□ -0.56
COPB1-203ENST00000525214 SOX11P35716 441 aa11.53□□□□□ -0.56
COPB1-203ENST00000525214 CYP2U1Q7Z449 544 aa11.53□□□□□ -0.56
COPB1-203ENST00000525214 WIPF1O43516 503 aa11.52□□□□□ -0.57
COPB1-203ENST00000525214 SEMA3FQ13275 785 aa11.52□□□□□ -0.57
COPB1-203ENST00000525214 DOLKQ9UPQ8 538 aa11.52□□□□□ -0.57
COPB1-203ENST00000525214 MEN1O00255 615 aa11.51□□□□□ -0.57
COPB1-203ENST00000525214 RNF144AP50876 292 aaPredicted RBP11.51□□□□□ -0.57
COPB1-203ENST00000525214 IRF7Q92985 503 aa11.51□□□□□ -0.57
COPB1-203ENST00000525214 ALG2Q9H553 416 aa11.51□□□□□ -0.57
COPB1-203ENST00000525214 SLC35F4A4IF30 521 aa11.5□□□□□ -0.57
COPB1-203ENST00000525214 POM121CA8CG34 1229 aa11.5□□□□□ -0.57
COPB1-203ENST00000525214 PIK3CDO00329 1044 aa11.5□□□□□ -0.57
COPB1-203ENST00000525214 VSIG8P0DPA2 414 aa11.5□□□□□ -0.57
COPB1-203ENST00000525214 CLN3Q13286 438 aa11.5□□□□□ -0.57
COPB1-203ENST00000525214 ARHGEF10LQ9HCE6 1279 aa11.5□□□□□ -0.57
COPB1-203ENST00000525214 SENP3-EIF4A1A0A087X0R7 540 aa11.49□□□□□ -0.57
COPB1-203ENST00000525214 MYCP01106 439 aaPredicted RBP11.49□□□□□ -0.57
COPB1-203ENST00000525214 GMPRP36959 345 aa11.49□□□□□ -0.57
COPB1-203ENST00000525214 ADAMTS19Q8TE59 1207 aa11.49□□□□□ -0.57
COPB1-203ENST00000525214 CLUAP1Q96AJ1 413 aa11.49□□□□□ -0.57
COPB1-203ENST00000525214 RAB6BQ9NRW1 208 aa11.49□□□□□ -0.57
COPB1-203ENST00000525214 GPC1P35052 558 aa11.48□□□□□ -0.57
COPB1-203ENST00000525214 CCDC155Q8N6L0 562 aa11.48□□□□□ -0.57
COPB1-203ENST00000525214 PLPP7Q8NBV4 271 aa11.48□□□□□ -0.57
COPB1-203ENST00000525214 OXLD1Q5BKU9 147 aa11.47□□□□□ -0.57
COPB1-203ENST00000525214 LYSMD3Q7Z3D4 306 aa11.47□□□□□ -0.57
COPB1-203ENST00000525214 WWC1Q8IX03 1113 aa11.47□□□□□ -0.57
COPB1-203ENST00000525214 ESF1Q9H501 851 aaKnown RBP11.47□□□□□ -0.57
COPB1-203ENST00000525214 GNRH1P01148 92 aa11.46□□□□□ -0.57
COPB1-203ENST00000525214 IL2RAP01589 272 aa11.46□□□□□ -0.57
COPB1-203ENST00000525214 USP4Q13107 963 aa11.46□□□□□ -0.57
COPB1-203ENST00000525214 PRICKLE2Q7Z3G6 844 aa11.46□□□□□ -0.57
COPB1-203ENST00000525214 STAU1O95793 577 aaKnown RBP11.45□□□□□ -0.58
COPB1-203ENST00000525214 FNBP4Q8N3X1 1017 aaPredicted RBP11.45□□□□□ -0.58
COPB1-203ENST00000525214 GRIP2Q9C0E4 1043 aa11.45□□□□□ -0.58
COPB1-203ENST00000525214 HRH3Q9Y5N1 445 aa11.45□□□□□ -0.58
COPB1-203ENST00000525214 RHOQP17081 205 aa11.44□□□□□ -0.58
COPB1-203ENST00000525214 MAP7D1Q3KQU3 841 aa11.44□□□□□ -0.58
COPB1-203ENST00000525214 NLRP3Q96P20 1036 aa11.44□□□□□ -0.58
COPB1-203ENST00000525214 CNKSR1Q969H4 720 aa11.43□□□□□ -0.58
COPB1-203ENST00000525214 ESYT1Q9BSJ8 1104 aa11.43□□□□□ -0.58
COPB1-203ENST00000525214 XAGE2Q96GT9 111 aa11.42□□□□□ -0.58
COPB1-203ENST00000525214 ITGA6P23229 1130 aa11.41□□□□□ -0.58
COPB1-203ENST00000525214 SLC27A3Q5K4L6 730 aa11.41□□□□□ -0.58
COPB1-203ENST00000525214 PROSER2Q86WR7 435 aaPredicted RBP11.41□□□□□ -0.58
COPB1-203ENST00000525214 GPR161Q8N6U8 529 aaKnown RBP11.41□□□□□ -0.58
COPB1-203ENST00000525214 ETNK1Q9HBU6 452 aa11.41□□□□□ -0.58
COPB1-203ENST00000525214 NANOS1Q8WY41 292 aaKnown RBP11.4□□□□□ -0.58
COPB1-203ENST00000525214 SIRT1Q96EB6 747 aa11.4□□□□□ -0.58
COPB1-203ENST00000525214 UCN2Q96RP3 112 aa11.4□□□□□ -0.58
COPB1-203ENST00000525214 SKIP12755 728 aa11.39□□□□□ -0.59
COPB1-203ENST00000525214 LORP23490 312 aaPredicted RBP11.39□□□□□ -0.59
COPB1-203ENST00000525214 SCNN1DP51172 638 aa11.39□□□□□ -0.59
COPB1-203ENST00000525214 CENPCQ03188 943 aa11.39□□□□□ -0.59
COPB1-203ENST00000525214 POU4F2Q12837 409 aa11.39□□□□□ -0.59
COPB1-203ENST00000525214 NFATC2IPQ8NCF5 419 aa11.39□□□□□ -0.59
COPB1-203ENST00000525214 FHDC1Q9C0D6 1143 aaPredicted RBP11.39□□□□□ -0.59
COPB1-203ENST00000525214 CUEDC1Q9NWM3 386 aaPredicted RBP11.39□□□□□ -0.59
COPB1-203ENST00000525214 SPATA31C2B4DYI2 1134 aa11.38□□□□□ -0.59
COPB1-203ENST00000525214 HDGFL1Q5TGJ6 251 aa11.38□□□□□ -0.59
COPB1-203ENST00000525214 A6NJR5 290 aa11.37□□□□□ -0.59
COPB1-203ENST00000525214 NBPF10Q6P3W6 841 aaKnown RBP11.37□□□□□ -0.59
COPB1-203ENST00000525214 NBPF15Q8N660 670 aa11.37□□□□□ -0.59
COPB1-203ENST00000525214 INSM1Q01101 510 aaPredicted RBP11.36□□□□□ -0.59
COPB1-203ENST00000525214 KRT76Q01546 638 aa11.36□□□□□ -0.59
COPB1-203ENST00000525214 ESCO1Q5FWF5 840 aa11.36□□□□□ -0.59
COPB1-203ENST00000525214 VWA5B2Q8N398 1253 aa11.36□□□□□ -0.59
COPB1-203ENST00000525214 USP17L5A8MUK1 530 aa11.35□□□□□ -0.59
COPB1-203ENST00000525214 NCOA4Q13772 614 aa11.35□□□□□ -0.59
COPB1-203ENST00000525214 PCDHGA11Q9Y5H2 935 aa11.35□□□□□ -0.59
COPB1-203ENST00000525214 GDF10P55107 478 aa11.34□□□□□ -0.59
COPB1-203ENST00000525214 EML3Q32P44 896 aa11.34□□□□□ -0.59
COPB1-203ENST00000525214 TBC1D9Q6ZT07 1266 aa11.34□□□□□ -0.59
COPB1-203ENST00000525214 DEPDC4Q8N2C3 294 aa11.34□□□□□ -0.59
COPB1-203ENST00000525214 ZSCAN10Q96SZ4 725 aaPredicted RBP11.34□□□□□ -0.59
COPB1-203ENST00000525214 CDC14CA4D256 554 aa11.33□□□□□ -0.6
COPB1-203ENST00000525214 WASLO00401 505 aaPredicted RBP11.33□□□□□ -0.6
COPB1-203ENST00000525214 INHAP05111 366 aa11.33□□□□□ -0.6
COPB1-203ENST00000525214 WDR44Q5JSH3 913 aa11.33□□□□□ -0.6
COPB1-203ENST00000525214 TAS1R3Q7RTX0 852 aa11.33□□□□□ -0.6
COPB1-203ENST00000525214 GLMNQ92990 594 aa11.33□□□□□ -0.6
COPB1-203ENST00000525214 DYRK1BQ9Y463 629 aa11.33□□□□□ -0.6
COPB1-203ENST00000525214 TMEM229AB2RXF0 380 aa11.32□□□□□ -0.6
COPB1-203ENST00000525214 LZTS3O60299 673 aaPredicted RBP11.32□□□□□ -0.6
COPB1-203ENST00000525214 TLR1Q15399 786 aa11.31□□□□□ -0.6
COPB1-203ENST00000525214 RNFT1Q5M7Z0 435 aa11.31□□□□□ -0.6
COPB1-203ENST00000525214 SV2AQ7L0J3 742 aa11.31□□□□□ -0.6
COPB1-203ENST00000525214 NOD1Q9Y239 953 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms