RNA–Protein interactions for RNA: ENST00000522841.6

SMG1P3-206, Transcript of SMG1 pseudogene 3, humanhuman

TSL 2 BASIC

Gene SMG1P3, Length 2,774 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-206ENST00000522841 APBB1O00213 710 aa20.34■□□□□ 0.85
SMG1P3-206ENST00000522841 USP31Q70CQ4 1352 aa20.34■□□□□ 0.85
SMG1P3-206ENST00000522841 INTS3Q68E01 1043 aaKnown RBP20.34■□□□□ 0.85
SMG1P3-206ENST00000522841 SSH2Q76I76 1423 aa20.33■□□□□ 0.85
SMG1P3-206ENST00000522841 CHMP5Q9NZZ3 219 aa20.33■□□□□ 0.85
SMG1P3-206ENST00000522841 SLC4A2P04920 1241 aa20.33■□□□□ 0.84
SMG1P3-206ENST00000522841 KIF2CQ99661 725 aa20.33■□□□□ 0.84
SMG1P3-206ENST00000522841 DCTPP1Q9H773 170 aa20.33■□□□□ 0.84
SMG1P3-206ENST00000522841 RGPD1P0DJD0 1748 aa20.33■□□□□ 0.84
SMG1P3-206ENST00000522841 RGS12O14924 1447 aa20.32■□□□□ 0.84
SMG1P3-206ENST00000522841 GSPT1P15170 499 aaKnown RBP20.32■□□□□ 0.84
SMG1P3-206ENST00000522841 PLEKHM2Q8IWE5 1019 aa20.32■□□□□ 0.84
SMG1P3-206ENST00000522841 TBX22Q9Y458 520 aa20.32■□□□□ 0.84
SMG1P3-206ENST00000522841 MCM4P33991 863 aa20.31■□□□□ 0.84
SMG1P3-206ENST00000522841 NLRP6P59044 892 aa20.31■□□□□ 0.84
SMG1P3-206ENST00000522841 OTUD7AQ8TE49 926 aaPredicted RBP20.31■□□□□ 0.84
SMG1P3-206ENST00000522841 EYA1Q99502 592 aa20.31■□□□□ 0.84
SMG1P3-206ENST00000522841 MEIS3Q99687 375 aa20.31■□□□□ 0.84
SMG1P3-206ENST00000522841 RBM42Q9BTD8 480 aaKnown RBP20.31■□□□□ 0.84
SMG1P3-206ENST00000522841 DIP2AQ14689 1571 aa20.31■□□□□ 0.84
SMG1P3-206ENST00000522841 MSH6P52701 1360 aa20.31■□□□□ 0.84
SMG1P3-206ENST00000522841 RTF1Q92541 710 aaKnown RBP20.31■□□□□ 0.84
SMG1P3-206ENST00000522841 FMN2Q9NZ56 1722 aa20.31■□□□□ 0.84
SMG1P3-206ENST00000522841 TSPYL4Q9UJ04 414 aa20.31■□□□□ 0.84
SMG1P3-206ENST00000522841 CRB1P82279 1406 aa20.3■□□□□ 0.84
SMG1P3-206ENST00000522841 CD2BP2O95400 341 aaKnown RBP20.3■□□□□ 0.84
SMG1P3-206ENST00000522841 G2E3Q7L622 706 aa20.3■□□□□ 0.84
SMG1P3-206ENST00000522841 LTV1Q96GA3 475 aaPredicted RBP20.3■□□□□ 0.84
SMG1P3-206ENST00000522841 TTC21AQ8NDW8 1320 aa20.3■□□□□ 0.84
SMG1P3-206ENST00000522841 SMARCA5O60264 1052 aaPredicted RBP20.3■□□□□ 0.84
SMG1P3-206ENST00000522841 SLC4A10Q6U841 1118 aa20.29■□□□□ 0.84
SMG1P3-206ENST00000522841 ANKRD44Q8N8A2 993 aa20.29■□□□□ 0.84
SMG1P3-206ENST00000522841 FLT4P35916 1363 aa20.29■□□□□ 0.84
SMG1P3-206ENST00000522841 F6X3S4 739 aa20.29■□□□□ 0.84
SMG1P3-206ENST00000522841 KCNA6P17658 529 aa20.29■□□□□ 0.84
SMG1P3-206ENST00000522841 RBM33Q96EV2 1170 aaKnown RBP20.29■□□□□ 0.84
SMG1P3-206ENST00000522841 ARXQ96QS3 562 aa20.29■□□□□ 0.84
SMG1P3-206ENST00000522841 RRAGDQ9NQL2 400 aaPredicted RBP20.29■□□□□ 0.84
SMG1P3-206ENST00000522841 FOXD4L1Q9NU39 408 aa20.29■□□□□ 0.84
SMG1P3-206ENST00000522841 CEP170BQ9Y4F5 1589 aaPredicted RBP20.29■□□□□ 0.84
SMG1P3-206ENST00000522841 CEP85Q6P2H3 762 aa20.29■□□□□ 0.84
SMG1P3-206ENST00000522841 GZF1Q9H116 711 aaPredicted RBP20.29■□□□□ 0.84
SMG1P3-206ENST00000522841 ARHGEF10O15013 1369 aa20.28■□□□□ 0.84
SMG1P3-206ENST00000522841 C14orf37Q86TY3 774 aa20.28■□□□□ 0.84
SMG1P3-206ENST00000522841 SBNO1A3KN83 1393 aa20.28■□□□□ 0.84
SMG1P3-206ENST00000522841 KIAA0232Q92628 1395 aa20.28■□□□□ 0.84
SMG1P3-206ENST00000522841 NECTIN2Q92692 538 aa20.28■□□□□ 0.84
SMG1P3-206ENST00000522841 SNX21Q969T3 373 aa20.28■□□□□ 0.84
SMG1P3-206ENST00000522841 KIF24Q5T7B8 1368 aa20.28■□□□□ 0.84
SMG1P3-206ENST00000522841 THEMISQ8N1K5 641 aaPredicted RBP20.27■□□□□ 0.84
SMG1P3-206ENST00000522841 ATP10DQ9P241 1426 aa20.27■□□□□ 0.84
SMG1P3-206ENST00000522841 SLIT1O75093 1534 aa20.27■□□□□ 0.84
SMG1P3-206ENST00000522841 PIK3C2AO00443 1686 aa20.27■□□□□ 0.84
SMG1P3-206ENST00000522841 ARHGAP23Q9P227 1491 aa20.27■□□□□ 0.83
SMG1P3-206ENST00000522841 HSP90AB1P08238 724 aaKnown RBP20.27■□□□□ 0.83
SMG1P3-206ENST00000522841 FER1L4A9Z1Z3 1794 aa20.26■□□□□ 0.83
SMG1P3-206ENST00000522841 CDC45O75419 566 aa20.26■□□□□ 0.83
SMG1P3-206ENST00000522841 HAP1P54257 671 aaPredicted RBP20.26■□□□□ 0.83
SMG1P3-206ENST00000522841 RTL1A6NKG5 1358 aa20.26■□□□□ 0.83
SMG1P3-206ENST00000522841 VSIG10Q8N0Z9 540 aa20.26■□□□□ 0.83
SMG1P3-206ENST00000522841 PTPRCP08575 1304 aa20.25■□□□□ 0.83
SMG1P3-206ENST00000522841 RPAP2Q8IXW5 612 aaPredicted RBP20.25■□□□□ 0.83
SMG1P3-206ENST00000522841 TTC22Q5TAA0 569 aa20.24■□□□□ 0.83
SMG1P3-206ENST00000522841 DDIT3P35638 169 aa20.23■□□□□ 0.83
SMG1P3-206ENST00000522841 IGSF1Q8N6C5 1336 aa20.23■□□□□ 0.83
SMG1P3-206ENST00000522841 USHBP1Q8N6Y0 703 aa20.23■□□□□ 0.83
SMG1P3-206ENST00000522841 ABTB2Q8N961 1025 aa20.23■□□□□ 0.83
SMG1P3-206ENST00000522841 PLEKHG5O94827 1062 aa20.23■□□□□ 0.83
SMG1P3-206ENST00000522841 NCOA3Q9Y6Q9 1424 aa20.22■□□□□ 0.83
SMG1P3-206ENST00000522841 ZMYND15Q9H091 742 aa20.22■□□□□ 0.83
SMG1P3-206ENST00000522841 TRAK2O60296 914 aa20.21■□□□□ 0.83
SMG1P3-206ENST00000522841 HOXC9P31274 260 aa20.21■□□□□ 0.83
SMG1P3-206ENST00000522841 KDRP35968 1356 aa20.21■□□□□ 0.83
SMG1P3-206ENST00000522841 GAS2L2Q8NHY3 880 aa20.21■□□□□ 0.83
SMG1P3-206ENST00000522841 ZBTB7CA1YPR0 619 aa20.2■□□□□ 0.82
SMG1P3-206ENST00000522841 HSP90AA1P07900 732 aaKnown RBP20.2■□□□□ 0.82
SMG1P3-206ENST00000522841 SETD1BQ9UPS6 1966 aaKnown RBP20.19■□□□□ 0.82
SMG1P3-206ENST00000522841 TNPO1Q92973 898 aaKnown RBP20.19■□□□□ 0.82
SMG1P3-206ENST00000522841 SDSP20132 328 aa20.19■□□□□ 0.82
SMG1P3-206ENST00000522841 XRN1Q8IZH2 1706 aaKnown RBP20.18■□□□□ 0.82
SMG1P3-206ENST00000522841 K7ELQ4 463 aaPredicted RBP20.17■□□□□ 0.82
SMG1P3-206ENST00000522841 GNAT3A8MTJ3 354 aa20.17■□□□□ 0.82
SMG1P3-206ENST00000522841 STK31Q9BXU1 1019 aa20.17■□□□□ 0.82
SMG1P3-206ENST00000522841 IL17REQ8NFR9 667 aa20.16■□□□□ 0.82
SMG1P3-206ENST00000522841 TRHP20396 242 aaPredicted RBP20.16■□□□□ 0.82
SMG1P3-206ENST00000522841 FKBP5Q13451 457 aaPredicted RBP20.16■□□□□ 0.82
SMG1P3-206ENST00000522841 USP26Q9BXU7 913 aa20.16■□□□□ 0.82
SMG1P3-206ENST00000522841 EXOC6BQ9Y2D4 811 aa20.15■□□□□ 0.82
SMG1P3-206ENST00000522841 MARF1Q9Y4F3 1742 aaKnown RBP20.15■□□□□ 0.82
SMG1P3-206ENST00000522841 CCT4P50991 539 aaKnown RBP20.15■□□□□ 0.82
SMG1P3-206ENST00000522841 TSHZ3Q63HK5 1081 aa20.14■□□□□ 0.82
SMG1P3-206ENST00000522841 FLIIQ13045 1269 aa20.14■□□□□ 0.81
SMG1P3-206ENST00000522841 HMMRO75330 724 aa20.13■□□□□ 0.81
SMG1P3-206ENST00000522841 RAB3GAP1Q15042 981 aa20.13■□□□□ 0.81
SMG1P3-206ENST00000522841 GLIPR1L2Q4G1C9 344 aa20.13■□□□□ 0.81
SMG1P3-206ENST00000522841 NAP1L5Q96NT1 182 aaPredicted RBP20.13■□□□□ 0.81
SMG1P3-206ENST00000522841 XRCC6P12956 609 aaKnown RBP eCLIP20.12■□□□□ 0.815e-8■■■■□ 23.6
SMG1P3-206ENST00000522841 L1TD1Q5T7N2 865 aaKnown RBP20.12■□□□□ 0.81
SMG1P3-206ENST00000522841 GOLGA6L3A6NEY3 463 aa20.12■□□□□ 0.81
SMG1P3-206ENST00000522841 GNAI2P04899 355 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms