RNA–Protein interactions for RNA: ENST00000520867.5

CPEB4-208, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-208ENST00000520867 CCT2P78371 535 aaKnown RBP15.29■□□□□ 0.04
CPEB4-208ENST00000520867 CHAMP1Q96JM3 812 aa15.29■□□□□ 0.04
CPEB4-208ENST00000520867 PAXBP1Q9Y5B6 917 aa15.29■□□□□ 0.04
CPEB4-208ENST00000520867 LIG1P18858 919 aa15.28■□□□□ 0.04
CPEB4-208ENST00000520867 ERBB3P21860 1342 aa15.28■□□□□ 0.04
CPEB4-208ENST00000520867 CLASP1Q7Z460 1538 aa15.28■□□□□ 0.04
CPEB4-208ENST00000520867 MTA1Q13330 715 aa15.28■□□□□ 0.04
CPEB4-208ENST00000520867 NAIF1Q69YI7 327 aaPredicted RBP15.28■□□□□ 0.04
CPEB4-208ENST00000520867 PANK1Q8TE04 598 aa15.28■□□□□ 0.04
CPEB4-208ENST00000520867 CASKIN1Q8WXD9 1431 aa15.27■□□□□ 0.04
CPEB4-208ENST00000520867 NUCB2P80303 420 aa15.27■□□□□ 0.04
CPEB4-208ENST00000520867 CASC1Q6TDU7 716 aa15.27■□□□□ 0.04
CPEB4-208ENST00000520867 RWDD1Q9H446 243 aaPredicted RBP15.27■□□□□ 0.04
CPEB4-208ENST00000520867 ADAMTS8Q9UP79 889 aa15.27■□□□□ 0.04
CPEB4-208ENST00000520867 SPAG9O60271 1321 aaKnown RBP15.27■□□□□ 0.03
CPEB4-208ENST00000520867 PNMA6AP0CW24 399 aaPredicted RBP15.27■□□□□ 0.03
CPEB4-208ENST00000520867 C1QTNF12Q5T7M4 302 aa15.27■□□□□ 0.03
CPEB4-208ENST00000520867 IQUBQ8NA54 791 aa15.27■□□□□ 0.03
CPEB4-208ENST00000520867 FAM210AQ96ND0 272 aa15.27■□□□□ 0.03
CPEB4-208ENST00000520867 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.03
CPEB4-208ENST00000520867 EIF3CLB5ME19 914 aaKnown RBP15.26■□□□□ 0.03
CPEB4-208ENST00000520867 CCDC96Q2M329 555 aa15.26■□□□□ 0.03
CPEB4-208ENST00000520867 EIF3CQ99613 913 aaKnown RBP15.26■□□□□ 0.03
CPEB4-208ENST00000520867 PPM1EQ8WY54 764 aa15.26■□□□□ 0.03
CPEB4-208ENST00000520867 CTAGE5O15320 804 aa15.25■□□□□ 0.03
CPEB4-208ENST00000520867 ANKRD23Q86SG2 305 aa15.25■□□□□ 0.03
CPEB4-208ENST00000520867 PIK3R5Q8WYR1 880 aa15.25■□□□□ 0.03
CPEB4-208ENST00000520867 ZNF428Q96B54 188 aa15.25■□□□□ 0.03
CPEB4-208ENST00000520867 CAND2O75155 1236 aa15.25■□□□□ 0.03
CPEB4-208ENST00000520867 H2AFXP16104 143 aaPredicted RBP15.25■□□□□ 0.03
CPEB4-208ENST00000520867 RABEP1Q15276 862 aa15.25■□□□□ 0.03
CPEB4-208ENST00000520867 ANKRD36BQ8N2N9 1353 aa15.25■□□□□ 0.03
CPEB4-208ENST00000520867 TPM4P67936 248 aa15.24■□□□□ 0.03
CPEB4-208ENST00000520867 REXO1L1PQ8IX06 675 aa15.24■□□□□ 0.03
CPEB4-208ENST00000520867 PLEKHD1A6NEE1 506 aa15.24■□□□□ 0.03
CPEB4-208ENST00000520867 COQ9O75208 318 aa15.24■□□□□ 0.03
CPEB4-208ENST00000520867 IPO7O95373 1038 aaKnown RBP15.24■□□□□ 0.03
CPEB4-208ENST00000520867 GPS2Q13227 327 aa15.24■□□□□ 0.03
CPEB4-208ENST00000520867 RALGAPBQ86X10 1494 aa15.23■□□□□ 0.03
CPEB4-208ENST00000520867 MBD3O95983 291 aa15.23■□□□□ 0.03
CPEB4-208ENST00000520867 CC2D2BQ6DHV5 1058 aa15.23■□□□□ 0.03
CPEB4-208ENST00000520867 PRPF38AQ8NAV1 312 aaKnown RBP15.23■□□□□ 0.03
CPEB4-208ENST00000520867 TATDN2Q93075 761 aa15.23■□□□□ 0.03
CPEB4-208ENST00000520867 CHIC2Q9UKJ5 165 aa15.23■□□□□ 0.03
CPEB4-208ENST00000520867 CPP00450 1065 aa15.23■□□□□ 0.03
CPEB4-208ENST00000520867 ZSCAN16Q9H4T2 348 aaPredicted RBP15.23■□□□□ 0.03
CPEB4-208ENST00000520867 ZDHHC9Q9Y397 364 aa15.22■□□□□ 0.03
CPEB4-208ENST00000520867 PER1O15534 1290 aaPredicted RBP15.22■□□□□ 0.03
CPEB4-208ENST00000520867 AP5Z1O43299 807 aa15.22■□□□□ 0.03
CPEB4-208ENST00000520867 KDM4AO75164 1064 aa15.22■□□□□ 0.03
CPEB4-208ENST00000520867 MIEF2Q96C03 454 aa15.22■□□□□ 0.03
CPEB4-208ENST00000520867 NUCKS1Q9H1E3 243 aaKnown RBP15.22■□□□□ 0.03
CPEB4-208ENST00000520867 SLC24A3Q9HC58 644 aa15.22■□□□□ 0.03
CPEB4-208ENST00000520867 ZCCHC17Q9NP64 241 aaKnown RBP15.22■□□□□ 0.03
CPEB4-208ENST00000520867 TPM3P06753 285 aa15.21■□□□□ 0.03
CPEB4-208ENST00000520867 CARD11Q9BXL7 1154 aa15.21■□□□□ 0.03
CPEB4-208ENST00000520867 UBXN6Q9BZV1 441 aa15.21■□□□□ 0.03
CPEB4-208ENST00000520867 CLCN6P51797 869 aa15.21■□□□□ 0.03
CPEB4-208ENST00000520867 WDR43Q15061 677 aaKnown RBP eCLIP15.21■□□□□ 0.03
CPEB4-208ENST00000520867 C21orf2O43822 256 aa15.2■□□□□ 0.02
CPEB4-208ENST00000520867 SMC2O95347 1197 aa15.2■□□□□ 0.02
CPEB4-208ENST00000520867 ERO1AQ96HE7 468 aa15.2■□□□□ 0.02
CPEB4-208ENST00000520867 IRAK4Q9NWZ3 460 aa15.2■□□□□ 0.02
CPEB4-208ENST00000520867 SHROOM2Q13796 1616 aa15.2■□□□□ 0.02
CPEB4-208ENST00000520867 ST20-MTHFSA0A0A6YYL1 179 aa15.2■□□□□ 0.02
CPEB4-208ENST00000520867 CORO7P57737 925 aa15.2■□□□□ 0.02
CPEB4-208ENST00000520867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.2■□□□□ 0.029e-8■■■■□ 22.3
CPEB4-208ENST00000520867 SPC24Q8NBT2 197 aa15.2■□□□□ 0.02
CPEB4-208ENST00000520867 JAKMIP3Q5VZ66 844 aa15.19■□□□□ 0.02
CPEB4-208ENST00000520867 TTLL5Q6EMB2 1281 aa15.19■□□□□ 0.02
CPEB4-208ENST00000520867 GAPVD1Q14C86 1478 aa15.19■□□□□ 0.02
CPEB4-208ENST00000520867 ACTN2P35609 894 aa15.19■□□□□ 0.02
CPEB4-208ENST00000520867 ETAA1Q9NY74 926 aa15.19■□□□□ 0.02
CPEB4-208ENST00000520867 NEBLO76041 1014 aa15.18■□□□□ 0.02
CPEB4-208ENST00000520867 ZRANB2O95218 330 aaKnown RBP eCLIP15.18■□□□□ 0.02
CPEB4-208ENST00000520867 IRX1P78414 480 aaPredicted RBP15.18■□□□□ 0.02
CPEB4-208ENST00000520867 TPM1P09493 284 aa15.18■□□□□ 0.02
CPEB4-208ENST00000520867 PAX7P23759 505 aa15.18■□□□□ 0.02
CPEB4-208ENST00000520867 FOXR1Q6PIV2 292 aa15.18■□□□□ 0.02
CPEB4-208ENST00000520867 CWC22Q9HCG8 908 aaKnown RBP15.18■□□□□ 0.02
CPEB4-208ENST00000520867 UNC13AQ9UPW8 1703 aa15.18■□□□□ 0.02
CPEB4-208ENST00000520867 NPHP1O15259 732 aa15.17■□□□□ 0.02
CPEB4-208ENST00000520867 HTATSF1O43719 755 aaKnown RBP15.17■□□□□ 0.02
CPEB4-208ENST00000520867 HCLS1P14317 486 aaPredicted RBP15.17■□□□□ 0.02
CPEB4-208ENST00000520867 PTGS1P23219 599 aa15.17■□□□□ 0.02
CPEB4-208ENST00000520867 PAIP2Q9BPZ3 127 aaKnown RBP15.17■□□□□ 0.02
CPEB4-208ENST00000520867 SRRTQ9BXP5 876 aaKnown RBP15.17■□□□□ 0.02
CPEB4-208ENST00000520867 IFT57Q9NWB7 429 aa15.17■□□□□ 0.02
CPEB4-208ENST00000520867 UHRF1BP1Q6BDS2 1440 aa15.17■□□□□ 0.02
CPEB4-208ENST00000520867 PLXNC1O60486 1568 aa15.17■□□□□ 0.02
CPEB4-208ENST00000520867 TBC1D8BQ0IIM8 1120 aa15.17■□□□□ 0.02
CPEB4-208ENST00000520867 CWC27Q6UX04 472 aaKnown RBP15.17■□□□□ 0.02
CPEB4-208ENST00000520867 DNAAF4Q8WXU2 420 aa15.17■□□□□ 0.02
CPEB4-208ENST00000520867 CEP135Q66GS9 1140 aa15.16■□□□□ 0.02
CPEB4-208ENST00000520867 UHRF1BP1LA0JNW5 1464 aa15.16■□□□□ 0.02
CPEB4-208ENST00000520867 FAM135AQ9P2D6 1515 aa15.16■□□□□ 0.02
CPEB4-208ENST00000520867 ANKRD65E5RJM6 399 aa15.16■□□□□ 0.02
CPEB4-208ENST00000520867 FAM163BP0C2L3 166 aa15.16■□□□□ 0.02
CPEB4-208ENST00000520867 PLCB2Q00722 1185 aa15.16■□□□□ 0.02
CPEB4-208ENST00000520867 PSD3Q9NYI0 1048 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms