RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 NBPF6Q5VWK0 638 aa11.74□□□□□ -0.53
CTNNA1-203ENST00000517534 NBPF4Q96M43 638 aa11.74□□□□□ -0.53
CTNNA1-203ENST00000517534 ARXQ96QS3 562 aa11.74□□□□□ -0.53
CTNNA1-203ENST00000517534 ANKRD36BQ8N2N9 1353 aa11.74□□□□□ -0.53
CTNNA1-203ENST00000517534 PAPPAQ13219 1627 aa11.74□□□□□ -0.53
CTNNA1-203ENST00000517534 NSD2O96028 1365 aa11.73□□□□□ -0.53
CTNNA1-203ENST00000517534 MYOM1P52179 1685 aa11.73□□□□□ -0.53
CTNNA1-203ENST00000517534 KCNQ4P56696 695 aa11.73□□□□□ -0.53
CTNNA1-203ENST00000517534 RRS1Q15050 365 aaKnown RBP11.73□□□□□ -0.53
CTNNA1-203ENST00000517534 ZCRB1Q8TBF4 217 aaKnown RBP11.73□□□□□ -0.53
CTNNA1-203ENST00000517534 GGNBP2Q9H3C7 697 aa11.73□□□□□ -0.53
CTNNA1-203ENST00000517534 LTN1O94822 1766 aa11.72□□□□□ -0.53
CTNNA1-203ENST00000517534 GOLGB1Q14789 3259 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-203ENST00000517534 MAP3K5Q99683 1374 aa11.72□□□□□ -0.53
CTNNA1-203ENST00000517534 PNPLA7Q6ZV29 1317 aa11.72□□□□□ -0.53
CTNNA1-203ENST00000517534 TMF1P82094 1093 aa11.72□□□□□ -0.53
CTNNA1-203ENST00000517534 SLC16A10Q8TF71 515 aa11.72□□□□□ -0.53
CTNNA1-203ENST00000517534 MEGF6O75095 1541 aa11.71□□□□□ -0.53
CTNNA1-203ENST00000517534 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
CTNNA1-203ENST00000517534 SYTL4Q96C24 671 aaPredicted RBP11.71□□□□□ -0.53
CTNNA1-203ENST00000517534 RTL1A6NKG5 1358 aa11.7□□□□□ -0.54
CTNNA1-203ENST00000517534 BTAF1O14981 1849 aa11.7□□□□□ -0.54
CTNNA1-203ENST00000517534 HSP90AB2PQ58FF8 381 aa11.7□□□□□ -0.54
CTNNA1-203ENST00000517534 USHBP1Q8N6Y0 703 aa11.7□□□□□ -0.54
CTNNA1-203ENST00000517534 ZNF784Q8NCA9 323 aaPredicted RBP11.7□□□□□ -0.54
CTNNA1-203ENST00000517534 CARD14Q9BXL6 1004 aa11.7□□□□□ -0.54
CTNNA1-203ENST00000517534 USP47Q96K76 1375 aa11.69□□□□□ -0.54
CTNNA1-203ENST00000517534 CGNL1Q0VF96 1302 aa11.69□□□□□ -0.54
CTNNA1-203ENST00000517534 TFCP2L1Q9NZI6 479 aa11.69□□□□□ -0.54
CTNNA1-203ENST00000517534 FAM208AQ9UK61 1670 aaKnown RBP11.68□□□□□ -0.54
CTNNA1-203ENST00000517534 INSRP06213 1382 aa11.68□□□□□ -0.54
CTNNA1-203ENST00000517534 CCNL1Q9UK58 526 aaPredicted RBP11.68□□□□□ -0.54
CTNNA1-203ENST00000517534 TATP17735 454 aaPredicted RBP11.67□□□□□ -0.54
CTNNA1-203ENST00000517534 RAPGEF4Q8WZA2 1011 aa11.67□□□□□ -0.54
CTNNA1-203ENST00000517534 CYP27B1O15528 508 aa11.66□□□□□ -0.54
CTNNA1-203ENST00000517534 POLD1P28340 1107 aa11.66□□□□□ -0.54
CTNNA1-203ENST00000517534 TRIM26Q12899 539 aaPredicted RBP11.66□□□□□ -0.54
CTNNA1-203ENST00000517534 CDCA8Q53HL2 280 aa11.66□□□□□ -0.54
CTNNA1-203ENST00000517534 COL23A1Q86Y22 540 aaPredicted RBP11.66□□□□□ -0.54
CTNNA1-203ENST00000517534 KAT6BQ8WYB5 2073 aa11.66□□□□□ -0.54
CTNNA1-203ENST00000517534 KIF24Q5T7B8 1368 aa11.66□□□□□ -0.54
CTNNA1-203ENST00000517534 EMILIN1Q9Y6C2 1016 aa11.65□□□□□ -0.54
CTNNA1-203ENST00000517534 FLT4P35916 1363 aa11.65□□□□□ -0.55
CTNNA1-203ENST00000517534 GPR162Q16538 588 aa11.64□□□□□ -0.55
CTNNA1-203ENST00000517534 NLGN2Q8NFZ4 835 aa11.64□□□□□ -0.55
CTNNA1-203ENST00000517534 PCDH11XQ9BZA7 1347 aa11.63□□□□□ -0.55
CTNNA1-203ENST00000517534 PCDH11YQ9BZA8 1340 aa11.63□□□□□ -0.55
CTNNA1-203ENST00000517534 SMG6Q86US8 1419 aaKnown RBP11.63□□□□□ -0.55
CTNNA1-203ENST00000517534 MPRIPQ6WCQ1 1025 aa11.63□□□□□ -0.55
CTNNA1-203ENST00000517534 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
CTNNA1-203ENST00000517534 SHANK3Q9BYB0 1731 aa11.63□□□□□ -0.55
CTNNA1-203ENST00000517534 NSD3Q9BZ95 1437 aa11.62□□□□□ -0.55
CTNNA1-203ENST00000517534 NKX1-1Q15270 411 aaPredicted RBP11.62□□□□□ -0.55
CTNNA1-203ENST00000517534 PIGBQ92521 554 aa11.62□□□□□ -0.55
CTNNA1-203ENST00000517534 TIMELESSQ9UNS1 1208 aa11.62□□□□□ -0.55
CTNNA1-203ENST00000517534 RGPD2P0DJD1 1756 aa11.62□□□□□ -0.55
CTNNA1-203ENST00000517534 WASHC2AQ641Q2 1341 aa11.61□□□□□ -0.55
CTNNA1-203ENST00000517534 NCAPD2Q15021 1401 aa11.61□□□□□ -0.55
CTNNA1-203ENST00000517534 EYA1Q99502 592 aa11.61□□□□□ -0.55
CTNNA1-203ENST00000517534 PALLDQ8WX93 1383 aa11.61□□□□□ -0.55
CTNNA1-203ENST00000517534 LY75O60449 1722 aa11.6□□□□□ -0.55
CTNNA1-203ENST00000517534 COL24A1Q17RW2 1714 aa11.6□□□□□ -0.55
CTNNA1-203ENST00000517534 DOT1LQ8TEK3 1739 aa11.6□□□□□ -0.55
CTNNA1-203ENST00000517534 YBX3P16989 372 aaKnown RBP eCLIP11.6□□□□□ -0.55
CTNNA1-203ENST00000517534 MSL1Q68DK7 614 aa11.6□□□□□ -0.55
CTNNA1-203ENST00000517534 AMIGO3Q86WK7 504 aa11.6□□□□□ -0.55
CTNNA1-203ENST00000517534 POLKQ9UBT6 870 aa11.6□□□□□ -0.55
CTNNA1-203ENST00000517534 QSER1Q2KHR3 1735 aa11.6□□□□□ -0.55
CTNNA1-203ENST00000517534 C1QTNF8P60827 252 aa11.59□□□□□ -0.55
CTNNA1-203ENST00000517534 SMIM5Q71RC9 77 aa11.59□□□□□ -0.55
CTNNA1-203ENST00000517534 PELP1Q8IZL8 1130 aaKnown RBP11.59□□□□□ -0.55
CTNNA1-203ENST00000517534 FLAD1Q8NFF5 587 aa11.59□□□□□ -0.55
CTNNA1-203ENST00000517534 SMARCC1Q92922 1105 aaPredicted RBP11.59□□□□□ -0.55
CTNNA1-203ENST00000517534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.59□□□□□ -0.552e-8■■□□□ 11.5
CTNNA1-203ENST00000517534 PPM1GO15355 546 aaPredicted RBP11.58□□□□□ -0.56
CTNNA1-203ENST00000517534 SPG7Q9UQ90 795 aa11.58□□□□□ -0.56
CTNNA1-203ENST00000517534 GRIN3BO60391 1043 aa11.57□□□□□ -0.56
CTNNA1-203ENST00000517534 HMGB2P26583 209 aaKnown RBP11.57□□□□□ -0.56
CTNNA1-203ENST00000517534 CD2APQ9Y5K6 639 aa11.57□□□□□ -0.56
CTNNA1-203ENST00000517534 TUBGCP6Q96RT7 1819 aa11.57□□□□□ -0.56
CTNNA1-203ENST00000517534 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.56□□□□□ -0.56
CTNNA1-203ENST00000517534 LOC102724428A0A0B4J2F2 783 aa11.56□□□□□ -0.56
CTNNA1-203ENST00000517534 PHKG2P15735 406 aa11.56□□□□□ -0.56
CTNNA1-203ENST00000517534 SIK1P57059 783 aa11.56□□□□□ -0.56
CTNNA1-203ENST00000517534 EIF4A2Q14240 407 aaKnown RBP11.56□□□□□ -0.56
CTNNA1-203ENST00000517534 LINC00116Q8NCU8 138 aa11.56□□□□□ -0.56
CTNNA1-203ENST00000517534 AK7Q96M32 723 aa11.56□□□□□ -0.56
CTNNA1-203ENST00000517534 ASAP1Q9ULH1 1129 aa11.56□□□□□ -0.56
CTNNA1-203ENST00000517534 CEP350Q5VT06 3117 aa11.55□□□□□ -0.56
CTNNA1-203ENST00000517534 MYCNP04198 464 aaPredicted RBP11.55□□□□□ -0.56
CTNNA1-203ENST00000517534 ITPK1Q13572 414 aa11.55□□□□□ -0.56
CTNNA1-203ENST00000517534 IFNL2Q8IZJ0 200 aa11.55□□□□□ -0.56
CTNNA1-203ENST00000517534 ATG3Q9NT62 314 aa11.54□□□□□ -0.56
CTNNA1-203ENST00000517534 TMOD3Q9NYL9 352 aa11.54□□□□□ -0.56
CTNNA1-203ENST00000517534 CLSPNQ9HAW4 1339 aa11.54□□□□□ -0.56
CTNNA1-203ENST00000517534 CHD4Q14839 1912 aa11.53□□□□□ -0.56
CTNNA1-203ENST00000517534 TOGARAM1Q9Y4F4 1720 aa11.53□□□□□ -0.56
CTNNA1-203ENST00000517534 SENP3-EIF4A1A0A087X0R7 540 aa11.53□□□□□ -0.56
CTNNA1-203ENST00000517534 PHF14O94880 888 aa11.53□□□□□ -0.56
CTNNA1-203ENST00000517534 SSFA2P28290 1259 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms