RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 SOX11P35716 441 aa6.95□□□□□ -1.3
SNORA40.12-201ENST00000516329 PHTF2Q8N3S3 785 aa6.95□□□□□ -1.3
SNORA40.12-201ENST00000516329 OSBPL3Q9H4L5 887 aa6.95□□□□□ -1.3
SNORA40.12-201ENST00000516329 PIK3CDO00329 1044 aa6.94□□□□□ -1.3
SNORA40.12-201ENST00000516329 WFS1O76024 890 aa6.94□□□□□ -1.3
SNORA40.12-201ENST00000516329 MYCP01106 439 aaPredicted RBP6.94□□□□□ -1.3
SNORA40.12-201ENST00000516329 NFX1Q12986 1120 aaKnown RBP6.94□□□□□ -1.3
SNORA40.12-201ENST00000516329 FOXD4L5Q5VV16 416 aaPredicted RBP6.94□□□□□ -1.3
SNORA40.12-201ENST00000516329 CYP2U1Q7Z449 544 aa6.94□□□□□ -1.3
SNORA40.12-201ENST00000516329 ARHGEF10LQ9HCE6 1279 aa6.94□□□□□ -1.3
SNORA40.12-201ENST00000516329 RAB6BQ9NRW1 208 aa6.94□□□□□ -1.3
SNORA40.12-201ENST00000516329 NXF1Q9UBU9 619 aaKnown RBP6.94□□□□□ -1.3
SNORA40.12-201ENST00000516329 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.93□□□□□ -1.3
SNORA40.12-201ENST00000516329 TREML4Q6UXN2 200 aa6.93□□□□□ -1.3
SNORA40.12-201ENST00000516329 PROSER2Q86WR7 435 aaPredicted RBP6.93□□□□□ -1.3
SNORA40.12-201ENST00000516329 RNF217Q8TC41 542 aa6.93□□□□□ -1.3
SNORA40.12-201ENST00000516329 A0A1W2PRU2 124 aa6.92□□□□□ -1.3
SNORA40.12-201ENST00000516329 TRAK2O60296 914 aa6.92□□□□□ -1.3
SNORA40.12-201ENST00000516329 PLPP7Q8NBV4 271 aa6.92□□□□□ -1.3
SNORA40.12-201ENST00000516329 ALG2Q9H553 416 aa6.92□□□□□ -1.3
SNORA40.12-201ENST00000516329 PTSQ03393 145 aa6.91□□□□□ -1.3
SNORA40.12-201ENST00000516329 LCE2CQ5TA81 110 aa6.91□□□□□ -1.3
SNORA40.12-201ENST00000516329 ADAMTS19Q8TE59 1207 aa6.91□□□□□ -1.3
SNORA40.12-201ENST00000516329 NLRP3Q96P20 1036 aa6.91□□□□□ -1.3
SNORA40.12-201ENST00000516329 H3BM21 787 aa6.9□□□□□ -1.3
SNORA40.12-201ENST00000516329 STAU1O95793 577 aaKnown RBP6.9□□□□□ -1.3
SNORA40.12-201ENST00000516329 SKIP12755 728 aa6.9□□□□□ -1.3
SNORA40.12-201ENST00000516329 LCE2AQ5TA79 106 aaPredicted RBP6.9□□□□□ -1.3
SNORA40.12-201ENST00000516329 SLC16A10Q8TF71 515 aa6.9□□□□□ -1.3
SNORA40.12-201ENST00000516329 PPFIA3O75145 1194 aa6.89□□□□□ -1.31
SNORA40.12-201ENST00000516329 RHOQP17081 205 aa6.89□□□□□ -1.31
SNORA40.12-201ENST00000516329 USP4Q13107 963 aa6.89□□□□□ -1.31
SNORA40.12-201ENST00000516329 HDGFL1Q5TGJ6 251 aa6.89□□□□□ -1.31
SNORA40.12-201ENST00000516329 LYSMD3Q7Z3D4 306 aa6.89□□□□□ -1.31
SNORA40.12-201ENST00000516329 PRICKLE2Q7Z3G6 844 aa6.89□□□□□ -1.31
SNORA40.12-201ENST00000516329 FNBP4Q8N3X1 1017 aaPredicted RBP6.89□□□□□ -1.31
SNORA40.12-201ENST00000516329 CHIC2Q9UKJ5 165 aa6.89□□□□□ -1.31
SNORA40.12-201ENST00000516329 ERBB4Q15303 1308 aa6.88□□□□□ -1.31
SNORA40.12-201ENST00000516329 IL2RAP01589 272 aa6.88□□□□□ -1.31
SNORA40.12-201ENST00000516329 CLN3Q13286 438 aa6.88□□□□□ -1.31
SNORA40.12-201ENST00000516329 MAP7D1Q3KQU3 841 aa6.88□□□□□ -1.31
SNORA40.12-201ENST00000516329 SLC27A3Q5K4L6 730 aa6.88□□□□□ -1.31
SNORA40.12-201ENST00000516329 DEPDC4Q8N2C3 294 aa6.88□□□□□ -1.31
SNORA40.12-201ENST00000516329 GNRH1P01148 92 aa6.87□□□□□ -1.31
SNORA40.12-201ENST00000516329 RNF144AP50876 292 aaPredicted RBP6.87□□□□□ -1.31
SNORA40.12-201ENST00000516329 NPAS3Q8IXF0 933 aa6.87□□□□□ -1.31
SNORA40.12-201ENST00000516329 CCDC155Q8N6L0 562 aa6.87□□□□□ -1.31
SNORA40.12-201ENST00000516329 GLMNQ92990 594 aa6.87□□□□□ -1.31
SNORA40.12-201ENST00000516329 CNKSR1Q969H4 720 aa6.87□□□□□ -1.31
SNORA40.12-201ENST00000516329 UCN2Q96RP3 112 aa6.87□□□□□ -1.31
SNORA40.12-201ENST00000516329 A6NJR5 290 aa6.86□□□□□ -1.31
SNORA40.12-201ENST00000516329 USP17L5A8MUK1 530 aa6.86□□□□□ -1.31
SNORA40.12-201ENST00000516329 NCOA4Q13772 614 aa6.86□□□□□ -1.31
SNORA40.12-201ENST00000516329 EML3Q32P44 896 aa6.86□□□□□ -1.31
SNORA40.12-201ENST00000516329 IRF7Q92985 503 aa6.86□□□□□ -1.31
SNORA40.12-201ENST00000516329 SIRT1Q96EB6 747 aa6.86□□□□□ -1.31
SNORA40.12-201ENST00000516329 SLC35F4A4IF30 521 aa6.85□□□□□ -1.31
SNORA40.12-201ENST00000516329 GPC1P35052 558 aa6.85□□□□□ -1.31
SNORA40.12-201ENST00000516329 GMPRP36959 345 aa6.85□□□□□ -1.31
SNORA40.12-201ENST00000516329 TBC1D9Q6ZT07 1266 aa6.85□□□□□ -1.31
SNORA40.12-201ENST00000516329 ESYT1Q9BSJ8 1104 aa6.85□□□□□ -1.31
SNORA40.12-201ENST00000516329 ETNK1Q9HBU6 452 aa6.85□□□□□ -1.31
SNORA40.12-201ENST00000516329 SENP3-EIF4A1A0A087X0R7 540 aa6.84□□□□□ -1.31
SNORA40.12-201ENST00000516329 SCNN1DP51172 638 aa6.84□□□□□ -1.31
SNORA40.12-201ENST00000516329 CENPCQ03188 943 aa6.84□□□□□ -1.31
SNORA40.12-201ENST00000516329 POU4F2Q12837 409 aa6.84□□□□□ -1.31
SNORA40.12-201ENST00000516329 ESCO1Q5FWF5 840 aa6.84□□□□□ -1.31
SNORA40.12-201ENST00000516329 NFATC2IPQ8NCF5 419 aa6.84□□□□□ -1.31
SNORA40.12-201ENST00000516329 GRIP2Q9C0E4 1043 aa6.84□□□□□ -1.31
SNORA40.12-201ENST00000516329 CDC14CA4D256 554 aa6.83□□□□□ -1.32
SNORA40.12-201ENST00000516329 GDF10P55107 478 aa6.83□□□□□ -1.32
SNORA40.12-201ENST00000516329 GTF2IP78347 998 aa6.83□□□□□ -1.32
SNORA40.12-201ENST00000516329 PSME1Q06323 249 aa6.83□□□□□ -1.32
SNORA40.12-201ENST00000516329 TLR1Q15399 786 aa6.83□□□□□ -1.32
SNORA40.12-201ENST00000516329 XAGE2Q96GT9 111 aa6.83□□□□□ -1.32
SNORA40.12-201ENST00000516329 CALR3Q96L12 384 aaKnown RBP6.83□□□□□ -1.32
SNORA40.12-201ENST00000516329 NOD1Q9Y239 953 aa6.83□□□□□ -1.32
SNORA40.12-201ENST00000516329 USP17L3A6NCW0 530 aa6.82□□□□□ -1.32
SNORA40.12-201ENST00000516329 USP17L4A6NCW7 530 aa6.82□□□□□ -1.32
SNORA40.12-201ENST00000516329 ITGA6P23229 1130 aa6.82□□□□□ -1.32
SNORA40.12-201ENST00000516329 PHKA2P46019 1235 aa6.82□□□□□ -1.32
SNORA40.12-201ENST00000516329 NBPF10Q6P3W6 841 aaKnown RBP6.82□□□□□ -1.32
SNORA40.12-201ENST00000516329 USP17L2Q6R6M4 530 aa6.82□□□□□ -1.32
SNORA40.12-201ENST00000516329 USP17L1Q7RTZ2 530 aa6.82□□□□□ -1.32
SNORA40.12-201ENST00000516329 NBPF15Q8N660 670 aa6.82□□□□□ -1.32
SNORA40.12-201ENST00000516329 ZSCAN10Q96SZ4 725 aaPredicted RBP6.82□□□□□ -1.32
SNORA40.12-201ENST00000516329 FHDC1Q9C0D6 1143 aaPredicted RBP6.82□□□□□ -1.32
SNORA40.12-201ENST00000516329 SERTAD1Q9UHV2 236 aa6.82□□□□□ -1.32
SNORA40.12-201ENST00000516329 HRH3Q9Y5N1 445 aa6.82□□□□□ -1.32
SNORA40.12-201ENST00000516329 WASLO00401 505 aaPredicted RBP6.81□□□□□ -1.32
SNORA40.12-201ENST00000516329 ATP9BO43861 1147 aa6.81□□□□□ -1.32
SNORA40.12-201ENST00000516329 INHAP05111 366 aa6.81□□□□□ -1.32
SNORA40.12-201ENST00000516329 GTF2E1P29083 439 aaPredicted RBP6.81□□□□□ -1.32
SNORA40.12-201ENST00000516329 TMEM214Q6NUQ4 689 aaKnown RBP6.81□□□□□ -1.32
SNORA40.12-201ENST00000516329 CUEDC1Q9NWM3 386 aaPredicted RBP6.81□□□□□ -1.32
SNORA40.12-201ENST00000516329 ZNF777Q9ULD5 760 aaPredicted RBP6.81□□□□□ -1.32
SNORA40.12-201ENST00000516329 PCDHGA11Q9Y5H2 935 aa6.81□□□□□ -1.32
SNORA40.12-201ENST00000516329 WIPF1O43516 503 aa6.8□□□□□ -1.32
SNORA40.12-201ENST00000516329 VSIG8P0DPA2 414 aa6.8□□□□□ -1.32
SNORA40.12-201ENST00000516329 GNASQ5JWF2 1037 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms