RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 NCAPD2Q15021 1401 aa13.02□□□□□ -0.33
SCARNA16-201ENST00000515981 KAT6BQ8WYB5 2073 aa13.01□□□□□ -0.33
SCARNA16-201ENST00000515981 DIEXFQ68CQ4 756 aaKnown RBP13.01□□□□□ -0.33
SCARNA16-201ENST00000515981 WNK3Q9BYP7 1800 aa13.01□□□□□ -0.33
SCARNA16-201ENST00000515981 RGPD1P0DJD0 1748 aa13□□□□□ -0.33
SCARNA16-201ENST00000515981 PARP4Q9UKK3 1724 aaKnown RBP13□□□□□ -0.33
SCARNA16-201ENST00000515981 OVOS2A0A0G2JMS6 1433 aa13□□□□□ -0.33
SCARNA16-201ENST00000515981 CYP27B1O15528 508 aa13□□□□□ -0.33
SCARNA16-201ENST00000515981 PTF1AQ7RTS3 328 aa13□□□□□ -0.33
SCARNA16-201ENST00000515981 EP400Q96L91 3159 aa13□□□□□ -0.33
SCARNA16-201ENST00000515981 LRRC37A3O60309 1634 aa12.99□□□□□ -0.33
SCARNA16-201ENST00000515981 PHACTR3Q96KR7 559 aa12.99□□□□□ -0.33
SCARNA16-201ENST00000515981 RSPH6AQ9H0K4 717 aa12.99□□□□□ -0.33
SCARNA16-201ENST00000515981 TNS2Q63HR2 1409 aa12.98□□□□□ -0.33
SCARNA16-201ENST00000515981 KDRP35968 1356 aa12.98□□□□□ -0.33
SCARNA16-201ENST00000515981 PRKAR2BP31323 418 aa12.98□□□□□ -0.33
SCARNA16-201ENST00000515981 PLEKHO1Q53GL0 409 aaPredicted RBP12.98□□□□□ -0.33
SCARNA16-201ENST00000515981 FAM196AQ6ZSG2 479 aa12.98□□□□□ -0.33
SCARNA16-201ENST00000515981 ACSBG1Q96GR2 724 aa12.98□□□□□ -0.33
SCARNA16-201ENST00000515981 SPG7Q9UQ90 795 aa12.98□□□□□ -0.33
SCARNA16-201ENST00000515981 KCNQ2O43526 872 aa12.97□□□□□ -0.33
SCARNA16-201ENST00000515981 TRIM37O94972 964 aa12.97□□□□□ -0.33
SCARNA16-201ENST00000515981 MTHFSDQ2M296 383 aaKnown RBP12.97□□□□□ -0.33
SCARNA16-201ENST00000515981 ZNF530Q6P9A1 599 aaPredicted RBP12.97□□□□□ -0.33
SCARNA16-201ENST00000515981 UPF1Q92900 1129 aaKnown RBP eCLIP12.97□□□□□ -0.33
SCARNA16-201ENST00000515981 MRS2Q9HD23 443 aa12.96□□□□□ -0.33
SCARNA16-201ENST00000515981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.33
SCARNA16-201ENST00000515981 ADAMTS8Q9UP79 889 aa12.96□□□□□ -0.33
SCARNA16-201ENST00000515981 SOCS7O14512 581 aa12.95□□□□□ -0.34
SCARNA16-201ENST00000515981 FCHSD2O94868 740 aa12.95□□□□□ -0.34
SCARNA16-201ENST00000515981 PHKG2P15735 406 aa12.95□□□□□ -0.34
SCARNA16-201ENST00000515981 WDR43Q15061 677 aaKnown RBP eCLIP12.95□□□□□ -0.34
SCARNA16-201ENST00000515981 CCDC146Q8IYE0 955 aa12.95□□□□□ -0.34
SCARNA16-201ENST00000515981 MIER1Q8N108 512 aa12.95□□□□□ -0.34
SCARNA16-201ENST00000515981 PCDH11XQ9BZA7 1347 aa12.94□□□□□ -0.34
SCARNA16-201ENST00000515981 PCDH11YQ9BZA8 1340 aa12.94□□□□□ -0.34
SCARNA16-201ENST00000515981 SHANK3Q9BYB0 1731 aa12.94□□□□□ -0.34
SCARNA16-201ENST00000515981 PRIM1P49642 420 aaKnown RBP12.94□□□□□ -0.34
SCARNA16-201ENST00000515981 AMOTQ4VCS5 1084 aa12.94□□□□□ -0.34
SCARNA16-201ENST00000515981 IFNL2Q8IZJ0 200 aa12.94□□□□□ -0.34
SCARNA16-201ENST00000515981 SENP3-EIF4A1A0A087X0R7 540 aa12.93□□□□□ -0.34
SCARNA16-201ENST00000515981 MPRIPQ6WCQ1 1025 aa12.93□□□□□ -0.34
SCARNA16-201ENST00000515981 PNISRQ8TF01 805 aaKnown RBP12.93□□□□□ -0.34
SCARNA16-201ENST00000515981 PLEKHF1Q96S99 279 aa12.93□□□□□ -0.34
SCARNA16-201ENST00000515981 NKX1-1Q15270 411 aaPredicted RBP12.92□□□□□ -0.34
SCARNA16-201ENST00000515981 C1orf141Q5JVX7 400 aa12.92□□□□□ -0.34
SCARNA16-201ENST00000515981 PKD1L3Q7Z443 1732 aa12.92□□□□□ -0.34
SCARNA16-201ENST00000515981 DEFB132Q7Z7B7 95 aa12.92□□□□□ -0.34
SCARNA16-201ENST00000515981 SYTL4Q96C24 671 aaPredicted RBP12.92□□□□□ -0.34
SCARNA16-201ENST00000515981 LGR6Q9HBX8 967 aa12.92□□□□□ -0.34
SCARNA16-201ENST00000515981 APBA3O96018 575 aa12.91□□□□□ -0.34
SCARNA16-201ENST00000515981 AKAP4Q5JQC9 854 aa12.9□□□□□ -0.34
SCARNA16-201ENST00000515981 BCL11BQ9C0K0 894 aaPredicted RBP12.9□□□□□ -0.34
SCARNA16-201ENST00000515981 RRP7AQ9Y3A4 280 aaKnown RBP12.9□□□□□ -0.34
SCARNA16-201ENST00000515981 EN1Q05925 392 aaPredicted RBP12.89□□□□□ -0.35
SCARNA16-201ENST00000515981 FAM9BQ8IZU0 186 aa12.89□□□□□ -0.35
SCARNA16-201ENST00000515981 GAS2L2Q8NHY3 880 aa12.89□□□□□ -0.35
SCARNA16-201ENST00000515981 SBF2Q86WG5 1849 aa12.89□□□□□ -0.35
SCARNA16-201ENST00000515981 BCL9O00512 1426 aa12.88□□□□□ -0.35
SCARNA16-201ENST00000515981 GNAT3A8MTJ3 354 aa12.88□□□□□ -0.35
SCARNA16-201ENST00000515981 RNMTO43148 476 aaKnown RBP12.88□□□□□ -0.35
SCARNA16-201ENST00000515981 SF3B2Q13435 895 aaKnown RBP12.88□□□□□ -0.35
SCARNA16-201ENST00000515981 DCTN1Q14203 1278 aa12.88□□□□□ -0.35
SCARNA16-201ENST00000515981 IL17REQ8NFR9 667 aa12.88□□□□□ -0.35
SCARNA16-201ENST00000515981 PIGBQ92521 554 aa12.88□□□□□ -0.35
SCARNA16-201ENST00000515981 DCAF5Q96JK2 942 aa12.88□□□□□ -0.35
SCARNA16-201ENST00000515981 KDM6AO15550 1401 aaPredicted RBP12.88□□□□□ -0.35
SCARNA16-201ENST00000515981 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
SCARNA16-201ENST00000515981 HSP90AB1P08238 724 aaKnown RBP12.87□□□□□ -0.35
SCARNA16-201ENST00000515981 NEUROD2Q15784 382 aa12.87□□□□□ -0.35
SCARNA16-201ENST00000515981 NFE2L2Q16236 605 aa12.87□□□□□ -0.35
SCARNA16-201ENST00000515981 MCM10Q7L590 875 aa12.87□□□□□ -0.35
SCARNA16-201ENST00000515981 CCDC125Q86Z20 511 aa12.87□□□□□ -0.35
SCARNA16-201ENST00000515981 RUNDC1Q96C34 613 aa12.87□□□□□ -0.35
SCARNA16-201ENST00000515981 PNNQ9H307 717 aaKnown RBP12.87□□□□□ -0.35
SCARNA16-201ENST00000515981 PLEKHG2Q9H7P9 1386 aa12.86□□□□□ -0.35
SCARNA16-201ENST00000515981 CCER2I3L3R5 266 aa12.86□□□□□ -0.35
SCARNA16-201ENST00000515981 NEFMP07197 916 aa12.86□□□□□ -0.35
SCARNA16-201ENST00000515981 TMPOP42166 694 aaKnown RBP12.86□□□□□ -0.35
SCARNA16-201ENST00000515981 CABP4P57796 275 aa12.86□□□□□ -0.35
SCARNA16-201ENST00000515981 EZH2Q15910 746 aaKnown RBP12.86□□□□□ -0.35
SCARNA16-201ENST00000515981 NFATC2IPQ8NCF5 419 aa12.86□□□□□ -0.35
SCARNA16-201ENST00000515981 THUMPD2Q9BTF0 503 aaKnown RBP12.86□□□□□ -0.35
SCARNA16-201ENST00000515981 DOT1LQ8TEK3 1739 aa12.85□□□□□ -0.35
SCARNA16-201ENST00000515981 TOGARAM1Q9Y4F4 1720 aa12.85□□□□□ -0.35
SCARNA16-201ENST00000515981 MAP3K5Q99683 1374 aa12.85□□□□□ -0.35
SCARNA16-201ENST00000515981 ERVV-2B6SEH9 535 aa12.85□□□□□ -0.35
SCARNA16-201ENST00000515981 APAF1O14727 1248 aa12.85□□□□□ -0.35
SCARNA16-201ENST00000515981 KCNQ4P56696 695 aa12.85□□□□□ -0.35
SCARNA16-201ENST00000515981 RIPK4P57078 832 aa12.85□□□□□ -0.35
SCARNA16-201ENST00000515981 CAMKK2Q96RR4 588 aa12.85□□□□□ -0.35
SCARNA16-201ENST00000515981 TMOD3Q9NYL9 352 aa12.85□□□□□ -0.35
SCARNA16-201ENST00000515981 ASAP1Q9ULH1 1129 aa12.85□□□□□ -0.35
SCARNA16-201ENST00000515981 BAG6P46379 1132 aa12.84□□□□□ -0.35
SCARNA16-201ENST00000515981 PROM2Q8N271 834 aa12.84□□□□□ -0.35
SCARNA16-201ENST00000515981 ITGB4P16144 1822 aa12.83□□□□□ -0.35
SCARNA16-201ENST00000515981 TNS1Q9HBL0 1735 aaKnown RBP12.83□□□□□ -0.36
SCARNA16-201ENST00000515981 RTF1Q92541 710 aaKnown RBP12.83□□□□□ -0.36
SCARNA16-201ENST00000515981 SLC52A2Q9HAB3 445 aa12.83□□□□□ -0.36
SCARNA16-201ENST00000515981 ATG3Q9NT62 314 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms