RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 COL18A1P39060 1754 aa15.47■□□□□ 0.07
LMNA-224ENST00000515711 XPCQ01831 940 aaPredicted RBP15.47■□□□□ 0.07
LMNA-224ENST00000515711 NCAPD2Q15021 1401 aa15.47■□□□□ 0.07
LMNA-224ENST00000515711 GNAI1P63096 354 aa15.46■□□□□ 0.07
LMNA-224ENST00000515711 ARHGEF25Q86VW2 580 aa15.46■□□□□ 0.07
LMNA-224ENST00000515711 AEBP1Q8IUX7 1158 aa15.46■□□□□ 0.07
LMNA-224ENST00000515711 GAS2L2Q8NHY3 880 aa15.46■□□□□ 0.07
LMNA-224ENST00000515711 EYA1Q99502 592 aa15.46■□□□□ 0.07
LMNA-224ENST00000515711 IFT57Q9NWB7 429 aa15.46■□□□□ 0.07
LMNA-224ENST00000515711 BCL9LQ86UU0 1499 aa15.46■□□□□ 0.06
LMNA-224ENST00000515711 IFFO2Q5TF58 517 aa15.45■□□□□ 0.06
LMNA-224ENST00000515711 LMOD2Q6P5Q4 547 aa15.45■□□□□ 0.06
LMNA-224ENST00000515711 ZNF428Q96B54 188 aa15.45■□□□□ 0.06
LMNA-224ENST00000515711 SPATA31A3Q5VYP0 1347 aa15.44■□□□□ 0.06
LMNA-224ENST00000515711 VIRMAQ69YN4 1812 aaKnown RBP15.44■□□□□ 0.06
LMNA-224ENST00000515711 PLEKHG2Q9H7P9 1386 aa15.44■□□□□ 0.06
LMNA-224ENST00000515711 SF3B2Q13435 895 aaKnown RBP15.43■□□□□ 0.06
LMNA-224ENST00000515711 SOS2Q07890 1332 aaPredicted RBP15.43■□□□□ 0.06
LMNA-224ENST00000515711 CPDO75976 1380 aa15.42■□□□□ 0.06
LMNA-224ENST00000515711 HTATSF1O43719 755 aaKnown RBP15.42■□□□□ 0.06
LMNA-224ENST00000515711 GJD4Q96KN9 370 aaPredicted RBP15.42■□□□□ 0.06
LMNA-224ENST00000515711 RARSP54136 660 aaKnown RBP15.41■□□□□ 0.06
LMNA-224ENST00000515711 PDE3AQ14432 1141 aa15.41■□□□□ 0.06
LMNA-224ENST00000515711 CFAP44Q96MT7 982 aa15.41■□□□□ 0.06
LMNA-224ENST00000515711 ZNF853P0CG23 659 aa15.4■□□□□ 0.06
LMNA-224ENST00000515711 CANXP27824 592 aaKnown RBP15.4■□□□□ 0.06
LMNA-224ENST00000515711 HAP1P54257 671 aaPredicted RBP15.4■□□□□ 0.06
LMNA-224ENST00000515711 TSR2Q969E8 191 aaKnown RBP15.4■□□□□ 0.06
LMNA-224ENST00000515711 CCDC136Q96JN2 1154 aa15.4■□□□□ 0.06
LMNA-224ENST00000515711 MAP3K5Q99683 1374 aa15.39■□□□□ 0.05
LMNA-224ENST00000515711 PLIN1O60240 522 aa15.39■□□□□ 0.05
LMNA-224ENST00000515711 MS4A1P11836 297 aa15.39■□□□□ 0.05
LMNA-224ENST00000515711 EXOSC9Q06265 439 aaKnown RBP15.39■□□□□ 0.05
LMNA-224ENST00000515711 RTF1Q92541 710 aaKnown RBP15.39■□□□□ 0.05
LMNA-224ENST00000515711 BCAR3O75815 825 aa15.38■□□□□ 0.05
LMNA-224ENST00000515711 ALDH1L2Q3SY69 923 aa15.38■□□□□ 0.05
LMNA-224ENST00000515711 EXOC6Q8TAG9 804 aa15.38■□□□□ 0.05
LMNA-224ENST00000515711 LTV1Q96GA3 475 aaPredicted RBP15.38■□□□□ 0.05
LMNA-224ENST00000515711 COL22A1Q8NFW1 1626 aaPredicted RBP15.38■□□□□ 0.05
LMNA-224ENST00000515711 KIF16BQ96L93 1317 aa15.38■□□□□ 0.05
LMNA-224ENST00000515711 PARP4Q9UKK3 1724 aaKnown RBP15.37■□□□□ 0.05
LMNA-224ENST00000515711 GLI3P10071 1580 aa15.37■□□□□ 0.05
LMNA-224ENST00000515711 OVOS2A0A0G2JMS6 1433 aa15.37■□□□□ 0.05
LMNA-224ENST00000515711 ZBTB7CA1YPR0 619 aa15.37■□□□□ 0.05
LMNA-224ENST00000515711 AAMPQ13685 434 aa15.37■□□□□ 0.05
LMNA-224ENST00000515711 R3HDM1Q15032 1099 aaKnown RBP15.37■□□□□ 0.05
LMNA-224ENST00000515711 MTHFSDQ2M296 383 aaKnown RBP15.37■□□□□ 0.05
LMNA-224ENST00000515711 ANKRD24Q8TF21 1146 aa15.37■□□□□ 0.05
LMNA-224ENST00000515711 CRBNQ96SW2 442 aa15.37■□□□□ 0.05
LMNA-224ENST00000515711 ERBB3P21860 1342 aa15.37■□□□□ 0.05
LMNA-224ENST00000515711 PKD1L3Q7Z443 1732 aa15.37■□□□□ 0.05
LMNA-224ENST00000515711 KIAA0232Q92628 1395 aa15.36■□□□□ 0.05
LMNA-224ENST00000515711 CACNA1FO60840 1977 aa15.36■□□□□ 0.05
LMNA-224ENST00000515711 CRB1P82279 1406 aa15.36■□□□□ 0.05
LMNA-224ENST00000515711 ADAMTS7Q9UKP4 1686 aa15.36■□□□□ 0.05
LMNA-224ENST00000515711 B4GALNT3Q6L9W6 998 aa15.36■□□□□ 0.05
LMNA-224ENST00000515711 LAS1LQ9Y4W2 734 aaKnown RBP15.36■□□□□ 0.05
LMNA-224ENST00000515711 KDM3BQ7LBC6 1761 aa15.35■□□□□ 0.05
LMNA-224ENST00000515711 GNAT3A8MTJ3 354 aa15.35■□□□□ 0.05
LMNA-224ENST00000515711 BRPF1P55201 1214 aaPredicted RBP15.35■□□□□ 0.05
LMNA-224ENST00000515711 THUMPD2Q9BTF0 503 aaKnown RBP15.35■□□□□ 0.05
LMNA-224ENST00000515711 MBIPQ9NS73 344 aa15.35■□□□□ 0.05
LMNA-224ENST00000515711 SMC4Q9NTJ3 1288 aa15.35■□□□□ 0.05
LMNA-224ENST00000515711 FAM83GA6ND36 823 aa15.34■□□□□ 0.05
LMNA-224ENST00000515711 AMOTQ4VCS5 1084 aa15.34■□□□□ 0.05
LMNA-224ENST00000515711 NBPF6Q5VWK0 638 aa15.34■□□□□ 0.05
LMNA-224ENST00000515711 NBPF4Q96M43 638 aa15.34■□□□□ 0.05
LMNA-224ENST00000515711 BABAM1Q9NWV8 329 aa15.34■□□□□ 0.05
LMNA-224ENST00000515711 BRWD3Q6RI45 1802 aa15.33■□□□□ 0.05
LMNA-224ENST00000515711 PLEKHO1Q53GL0 409 aaPredicted RBP15.33■□□□□ 0.04
LMNA-224ENST00000515711 C20orf194Q5TEA3 1177 aa15.33■□□□□ 0.04
LMNA-224ENST00000515711 ZKSCAN2Q63HK3 967 aa15.33■□□□□ 0.04
LMNA-224ENST00000515711 SEPT12Q8IYM1 358 aa15.33■□□□□ 0.04
LMNA-224ENST00000515711 SIPA1L3O60292 1781 aaPredicted RBP15.33■□□□□ 0.04
LMNA-224ENST00000515711 SCN11AQ9UI33 1791 aa15.32■□□□□ 0.04
LMNA-224ENST00000515711 CHL1O00533 1208 aa15.32■□□□□ 0.04
LMNA-224ENST00000515711 IPO8O15397 1037 aaKnown RBP15.32■□□□□ 0.04
LMNA-224ENST00000515711 BAG6P46379 1132 aa15.32■□□□□ 0.04
LMNA-224ENST00000515711 ZC3H6P61129 1189 aaKnown RBP15.32■□□□□ 0.04
LMNA-224ENST00000515711 MCM10Q7L590 875 aa15.32■□□□□ 0.04
LMNA-224ENST00000515711 SOS1Q07889 1333 aaPredicted RBP15.32■□□□□ 0.04
LMNA-224ENST00000515711 COL14A1Q05707 1796 aaKnown RBP15.31■□□□□ 0.04
LMNA-224ENST00000515711 DCTN1Q14203 1278 aa15.31■□□□□ 0.04
LMNA-224ENST00000515711 TWISTNBQ3B726 338 aaPredicted RBP15.31■□□□□ 0.04
LMNA-224ENST00000515711 USHBP1Q8N6Y0 703 aa15.31■□□□□ 0.04
LMNA-224ENST00000515711 FRAT1Q92837 279 aaPredicted RBP15.31■□□□□ 0.04
LMNA-224ENST00000515711 EN1Q05925 392 aaPredicted RBP15.3■□□□□ 0.04
LMNA-224ENST00000515711 AKAP4Q5JQC9 854 aa15.3■□□□□ 0.04
LMNA-224ENST00000515711 CEMIPQ8WUJ3 1361 aa15.3■□□□□ 0.04
LMNA-224ENST00000515711 SSH1Q8WYL5 1049 aa15.3■□□□□ 0.04
LMNA-224ENST00000515711 AXIN2Q9Y2T1 843 aa15.3■□□□□ 0.04
LMNA-224ENST00000515711 VAMP4O75379 141 aa15.29■□□□□ 0.04
LMNA-224ENST00000515711 PLEKHG5O94827 1062 aa15.29■□□□□ 0.04
LMNA-224ENST00000515711 UNC5CLQ8IV45 518 aa15.29■□□□□ 0.04
LMNA-224ENST00000515711 FTSJ3Q8IY81 847 aaKnown RBP15.29■□□□□ 0.04
LMNA-224ENST00000515711 BCL2L13Q9BXK5 485 aa15.29■□□□□ 0.04
LMNA-224ENST00000515711 COL5A2P05997 1499 aaPredicted RBP15.28■□□□□ 0.04
LMNA-224ENST00000515711 C1orf141Q5JVX7 400 aa15.28■□□□□ 0.04
LMNA-224ENST00000515711 ATF7IPQ6VMQ6 1270 aa15.28■□□□□ 0.04
LMNA-224ENST00000515711 DZIP1LQ8IYY4 767 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms