RNA–Protein interactions for RNA: ENST00000513632.2

PABPC4-218, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-218ENST00000513632 RTL1A6NKG5 1358 aa12.64□□□□□ -0.39
PABPC4-218ENST00000513632 SBF2Q86WG5 1849 aa12.64□□□□□ -0.39
PABPC4-218ENST00000513632 MSH5O43196 834 aa12.63□□□□□ -0.39
PABPC4-218ENST00000513632 GPR162Q16538 588 aa12.63□□□□□ -0.39
PABPC4-218ENST00000513632 NBPF6Q5VWK0 638 aa12.63□□□□□ -0.39
PABPC4-218ENST00000513632 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
PABPC4-218ENST00000513632 NBPF4Q96M43 638 aa12.63□□□□□ -0.39
PABPC4-218ENST00000513632 CCNL1Q9UK58 526 aaPredicted RBP12.63□□□□□ -0.39
PABPC4-218ENST00000513632 RGPD5Q99666 1765 aa12.62□□□□□ -0.39
PABPC4-218ENST00000513632 USP47Q96K76 1375 aa12.62□□□□□ -0.39
PABPC4-218ENST00000513632 WNK3Q9BYP7 1800 aa12.62□□□□□ -0.39
PABPC4-218ENST00000513632 USP54Q70EL1 1684 aa12.61□□□□□ -0.39
PABPC4-218ENST00000513632 USHBP1Q8N6Y0 703 aa12.61□□□□□ -0.39
PABPC4-218ENST00000513632 NHSQ6T4R5 1651 aa12.61□□□□□ -0.39
PABPC4-218ENST00000513632 MAP3K5Q99683 1374 aa12.6□□□□□ -0.39
PABPC4-218ENST00000513632 KCNQ4P56696 695 aa12.6□□□□□ -0.39
PABPC4-218ENST00000513632 HSP90AB2PQ58FF8 381 aa12.6□□□□□ -0.39
PABPC4-218ENST00000513632 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
PABPC4-218ENST00000513632 ZNF784Q8NCA9 323 aaPredicted RBP12.6□□□□□ -0.39
PABPC4-218ENST00000513632 TIMELESSQ9UNS1 1208 aa12.6□□□□□ -0.39
PABPC4-218ENST00000513632 CASZ1Q86V15 1759 aa12.6□□□□□ -0.39
PABPC4-218ENST00000513632 PNPLA7Q6ZV29 1317 aa12.6□□□□□ -0.39
PABPC4-218ENST00000513632 PCDH11XQ9BZA7 1347 aa12.6□□□□□ -0.39
PABPC4-218ENST00000513632 PCDH11YQ9BZA8 1340 aa12.6□□□□□ -0.39
PABPC4-218ENST00000513632 INSRP06213 1382 aa12.59□□□□□ -0.39
PABPC4-218ENST00000513632 FLAD1Q8NFF5 587 aa12.59□□□□□ -0.39
PABPC4-218ENST00000513632 FLT4P35916 1363 aa12.58□□□□□ -0.4
PABPC4-218ENST00000513632 KIF24Q5T7B8 1368 aa12.58□□□□□ -0.4
PABPC4-218ENST00000513632 PPM1GO15355 546 aaPredicted RBP12.58□□□□□ -0.4
PABPC4-218ENST00000513632 LTN1O94822 1766 aa12.57□□□□□ -0.4
PABPC4-218ENST00000513632 MPRIPQ6WCQ1 1025 aa12.57□□□□□ -0.4
PABPC4-218ENST00000513632 SMARCC1Q92922 1105 aaPredicted RBP12.57□□□□□ -0.4
PABPC4-218ENST00000513632 SPG7Q9UQ90 795 aa12.56□□□□□ -0.4
PABPC4-218ENST00000513632 MEGF6O75095 1541 aa12.56□□□□□ -0.4
PABPC4-218ENST00000513632 NSD2O96028 1365 aa12.56□□□□□ -0.4
PABPC4-218ENST00000513632 MYOM1P52179 1685 aa12.55□□□□□ -0.4
PABPC4-218ENST00000513632 GRIN3BO60391 1043 aa12.55□□□□□ -0.4
PABPC4-218ENST00000513632 COL23A1Q86Y22 540 aaPredicted RBP12.55□□□□□ -0.4
PABPC4-218ENST00000513632 CARD14Q9BXL6 1004 aa12.55□□□□□ -0.4
PABPC4-218ENST00000513632 AK7Q96M32 723 aa12.54□□□□□ -0.4
PABPC4-218ENST00000513632 POLR3GLQ9BT43 218 aa12.54□□□□□ -0.4
PABPC4-218ENST00000513632 EMILIN1Q9Y6C2 1016 aa12.54□□□□□ -0.4
PABPC4-218ENST00000513632 FAM208AQ9UK61 1670 aaKnown RBP12.54□□□□□ -0.4
PABPC4-218ENST00000513632 BTAF1O14981 1849 aa12.53□□□□□ -0.4
PABPC4-218ENST00000513632 PAPPAQ13219 1627 aa12.53□□□□□ -0.4
PABPC4-218ENST00000513632 CYP27B1O15528 508 aa12.53□□□□□ -0.4
PABPC4-218ENST00000513632 PALLDQ8WX93 1383 aa12.53□□□□□ -0.4
PABPC4-218ENST00000513632 NSD3Q9BZ95 1437 aa12.53□□□□□ -0.4
PABPC4-218ENST00000513632 MSL1Q68DK7 614 aa12.52□□□□□ -0.41
PABPC4-218ENST00000513632 WASHC2AQ641Q2 1341 aa12.52□□□□□ -0.41
PABPC4-218ENST00000513632 KAT6BQ8WYB5 2073 aa12.51□□□□□ -0.41
PABPC4-218ENST00000513632 NKX1-1Q15270 411 aaPredicted RBP12.51□□□□□ -0.41
PABPC4-218ENST00000513632 NLGN2Q8NFZ4 835 aa12.51□□□□□ -0.41
PABPC4-218ENST00000513632 PIGBQ92521 554 aa12.51□□□□□ -0.41
PABPC4-218ENST00000513632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.51□□□□□ -0.413e-11■□□□□ 9.4
PABPC4-218ENST00000513632 CLSPNQ9HAW4 1339 aa12.51□□□□□ -0.41
PABPC4-218ENST00000513632 C1QTNF8P60827 252 aa12.5□□□□□ -0.41
PABPC4-218ENST00000513632 IFNL2Q8IZJ0 200 aa12.5□□□□□ -0.41
PABPC4-218ENST00000513632 EYA1Q99502 592 aa12.5□□□□□ -0.41
PABPC4-218ENST00000513632 PCGF6Q9BYE7 350 aa12.5□□□□□ -0.41
PABPC4-218ENST00000513632 TMOD3Q9NYL9 352 aa12.5□□□□□ -0.41
PABPC4-218ENST00000513632 CD2APQ9Y5K6 639 aa12.5□□□□□ -0.41
PABPC4-218ENST00000513632 GIGYF1O75420 1035 aaPredicted RBP12.49□□□□□ -0.41
PABPC4-218ENST00000513632 PHF14O94880 888 aa12.49□□□□□ -0.41
PABPC4-218ENST00000513632 POLKQ9UBT6 870 aa12.49□□□□□ -0.41
PABPC4-218ENST00000513632 SENP3-EIF4A1A0A087X0R7 540 aa12.48□□□□□ -0.41
PABPC4-218ENST00000513632 LOC102724428A0A0B4J2F2 783 aa12.48□□□□□ -0.41
PABPC4-218ENST00000513632 TNNT2P45379 298 aaPredicted RBP12.48□□□□□ -0.41
PABPC4-218ENST00000513632 SIK1P57059 783 aa12.48□□□□□ -0.41
PABPC4-218ENST00000513632 UTRNP46939 3433 aa12.47□□□□□ -0.41
PABPC4-218ENST00000513632 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.47□□□□□ -0.41
PABPC4-218ENST00000513632 PRKCSHP14314 528 aaPredicted RBP12.47□□□□□ -0.41
PABPC4-218ENST00000513632 SSFA2P28290 1259 aa12.47□□□□□ -0.41
PABPC4-218ENST00000513632 EIF4G2P78344 907 aaKnown RBP eCLIP12.47□□□□□ -0.41
PABPC4-218ENST00000513632 PIAS4Q8N2W9 510 aaPredicted RBP12.47□□□□□ -0.41
PABPC4-218ENST00000513632 HSP90AB1P08238 724 aaKnown RBP12.46□□□□□ -0.41
PABPC4-218ENST00000513632 PHKG2P15735 406 aa12.46□□□□□ -0.41
PABPC4-218ENST00000513632 YBX3P16989 372 aaKnown RBP eCLIP12.46□□□□□ -0.41
PABPC4-218ENST00000513632 ATP6V1AP38606 617 aa12.46□□□□□ -0.41
PABPC4-218ENST00000513632 EIF4A2Q14240 407 aaKnown RBP12.45□□□□□ -0.42
PABPC4-218ENST00000513632 PLEKHO1Q53GL0 409 aaPredicted RBP12.45□□□□□ -0.42
PABPC4-218ENST00000513632 ASAP1Q9ULH1 1129 aa12.45□□□□□ -0.42
PABPC4-218ENST00000513632 DOT1LQ8TEK3 1739 aa12.45□□□□□ -0.42
PABPC4-218ENST00000513632 GNPATO15228 680 aa12.44□□□□□ -0.42
PABPC4-218ENST00000513632 ADRA2BP18089 450 aa12.44□□□□□ -0.42
PABPC4-218ENST00000513632 ERVV-2B6SEH9 535 aa12.43□□□□□ -0.42
PABPC4-218ENST00000513632 AMOTQ4VCS5 1084 aa12.43□□□□□ -0.42
PABPC4-218ENST00000513632 LINC00116Q8NCU8 138 aa12.43□□□□□ -0.42
PABPC4-218ENST00000513632 DCAF5Q96JK2 942 aa12.43□□□□□ -0.42
PABPC4-218ENST00000513632 PANK3Q9H999 370 aa12.43□□□□□ -0.42
PABPC4-218ENST00000513632 ATG3Q9NT62 314 aa12.43□□□□□ -0.42
PABPC4-218ENST00000513632 RTCBQ9Y3I0 505 aaKnown RBP12.43□□□□□ -0.42
PABPC4-218ENST00000513632 NCAPD2Q15021 1401 aa12.43□□□□□ -0.42
PABPC4-218ENST00000513632 CABP4P57796 275 aa12.42□□□□□ -0.42
PABPC4-218ENST00000513632 TRAPPC3LQ5T215 181 aa12.42□□□□□ -0.42
PABPC4-218ENST00000513632 MORC1Q86VD1 984 aa12.42□□□□□ -0.42
PABPC4-218ENST00000513632 RBM42Q9BTD8 480 aaKnown RBP12.42□□□□□ -0.42
PABPC4-218ENST00000513632 QSER1Q2KHR3 1735 aa12.42□□□□□ -0.42
PABPC4-218ENST00000513632 PLEKHG2Q9H7P9 1386 aa12.42□□□□□ -0.42
PABPC4-218ENST00000513632 LY75O60449 1722 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms