RNA–Protein interactions for RNA: ENST00000512968.5

RACK1-228, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-228ENST00000512968 GRIN3BO60391 1043 aa12.92□□□□□ -0.34
RACK1-228ENST00000512968 COL23A1Q86Y22 540 aaPredicted RBP12.92□□□□□ -0.34
RACK1-228ENST00000512968 ZCRB1Q8TBF4 217 aaKnown RBP12.92□□□□□ -0.34
RACK1-228ENST00000512968 NSD2O96028 1365 aa12.92□□□□□ -0.34
RACK1-228ENST00000512968 MAP3K19Q56UN5 1328 aa12.91□□□□□ -0.34
RACK1-228ENST00000512968 AMPHP49418 695 aa12.91□□□□□ -0.34
RACK1-228ENST00000512968 MON2Q7Z3U7 1717 aa12.91□□□□□ -0.34
RACK1-228ENST00000512968 HOXC9P31274 260 aa12.9□□□□□ -0.34
RACK1-228ENST00000512968 USHBP1Q8N6Y0 703 aa12.89□□□□□ -0.35
RACK1-228ENST00000512968 COG3Q96JB2 828 aa12.89□□□□□ -0.35
RACK1-228ENST00000512968 GOLGB1Q14789 3259 aaKnown RBP12.89□□□□□ -0.35
RACK1-228ENST00000512968 ATP10DQ9P241 1426 aa12.88□□□□□ -0.35
RACK1-228ENST00000512968 MEGF6O75095 1541 aa12.88□□□□□ -0.35
RACK1-228ENST00000512968 USP47Q96K76 1375 aa12.88□□□□□ -0.35
RACK1-228ENST00000512968 SHANK3Q9BYB0 1731 aa12.88□□□□□ -0.35
RACK1-228ENST00000512968 LTN1O94822 1766 aa12.87□□□□□ -0.35
RACK1-228ENST00000512968 USP54Q70EL1 1684 aa12.87□□□□□ -0.35
RACK1-228ENST00000512968 NBPF6Q5VWK0 638 aa12.87□□□□□ -0.35
RACK1-228ENST00000512968 NBPF4Q96M43 638 aa12.87□□□□□ -0.35
RACK1-228ENST00000512968 RRS1Q15050 365 aaKnown RBP12.86□□□□□ -0.35
RACK1-228ENST00000512968 ZNF526Q8TF50 670 aaPredicted RBP12.86□□□□□ -0.35
RACK1-228ENST00000512968 GPBP1L1Q9HC44 474 aaPredicted RBP12.86□□□□□ -0.35
RACK1-228ENST00000512968 WWC3Q9ULE0 1092 aa12.86□□□□□ -0.35
RACK1-228ENST00000512968 TRIM26Q12899 539 aaPredicted RBP12.85□□□□□ -0.35
RACK1-228ENST00000512968 PUS7Q96PZ0 661 aaKnown RBP12.85□□□□□ -0.35
RACK1-228ENST00000512968 CD2APQ9Y5K6 639 aa12.85□□□□□ -0.35
RACK1-228ENST00000512968 CEP350Q5VT06 3117 aa12.85□□□□□ -0.35
RACK1-228ENST00000512968 SMIM5Q71RC9 77 aa12.84□□□□□ -0.35
RACK1-228ENST00000512968 RAPGEF4Q8WZA2 1011 aa12.84□□□□□ -0.35
RACK1-228ENST00000512968 TATP17735 454 aaPredicted RBP12.83□□□□□ -0.36
RACK1-228ENST00000512968 MPRIPQ6WCQ1 1025 aa12.83□□□□□ -0.36
RACK1-228ENST00000512968 AMIGO3Q86WK7 504 aa12.83□□□□□ -0.36
RACK1-228ENST00000512968 TESK2Q96S53 571 aa12.83□□□□□ -0.36
RACK1-228ENST00000512968 PALLDQ8WX93 1383 aa12.82□□□□□ -0.36
RACK1-228ENST00000512968 COL24A1Q17RW2 1714 aa12.82□□□□□ -0.36
RACK1-228ENST00000512968 QSER1Q2KHR3 1735 aa12.82□□□□□ -0.36
RACK1-228ENST00000512968 DOT1LQ8TEK3 1739 aa12.82□□□□□ -0.36
RACK1-228ENST00000512968 PHF14O94880 888 aa12.82□□□□□ -0.36
RACK1-228ENST00000512968 FLAD1Q8NFF5 587 aa12.82□□□□□ -0.36
RACK1-228ENST00000512968 GGNBP2Q9H3C7 697 aa12.82□□□□□ -0.36
RACK1-228ENST00000512968 TUBGCP6Q96RT7 1819 aa12.82□□□□□ -0.36
RACK1-228ENST00000512968 CGNL1Q0VF96 1302 aa12.82□□□□□ -0.36
RACK1-228ENST00000512968 FAM208AQ9UK61 1670 aaKnown RBP12.81□□□□□ -0.36
RACK1-228ENST00000512968 ST20-MTHFSA0A0A6YYL1 179 aa12.81□□□□□ -0.36
RACK1-228ENST00000512968 HSPA6P17066 643 aa12.81□□□□□ -0.36
RACK1-228ENST00000512968 HSP90AB2PQ58FF8 381 aa12.81□□□□□ -0.36
RACK1-228ENST00000512968 AK7Q96M32 723 aa12.81□□□□□ -0.36
RACK1-228ENST00000512968 RTL1A6NKG5 1358 aa12.81□□□□□ -0.36
RACK1-228ENST00000512968 ADCY9O60503 1353 aa12.81□□□□□ -0.36
RACK1-228ENST00000512968 FYB1O15117 783 aa12.8□□□□□ -0.36
RACK1-228ENST00000512968 CYP27B1O15528 508 aa12.8□□□□□ -0.36
RACK1-228ENST00000512968 PCDH10Q9P2E7 1040 aa12.8□□□□□ -0.36
RACK1-228ENST00000512968 IGSF1Q8N6C5 1336 aa12.8□□□□□ -0.36
RACK1-228ENST00000512968 PCDH11XQ9BZA7 1347 aa12.8□□□□□ -0.36
RACK1-228ENST00000512968 PCDH11YQ9BZA8 1340 aa12.8□□□□□ -0.36
RACK1-228ENST00000512968 LY75O60449 1722 aa12.79□□□□□ -0.36
RACK1-228ENST00000512968 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.79□□□□□ -0.36
RACK1-228ENST00000512968 SMG6Q86US8 1419 aaKnown RBP12.79□□□□□ -0.36
RACK1-228ENST00000512968 SLC34A2O95436 690 aa12.78□□□□□ -0.36
RACK1-228ENST00000512968 PIGBQ92521 554 aa12.78□□□□□ -0.36
RACK1-228ENST00000512968 SMARCC1Q92922 1105 aaPredicted RBP12.78□□□□□ -0.36
RACK1-228ENST00000512968 TONSLQ96HA7 1378 aa12.78□□□□□ -0.36
RACK1-228ENST00000512968 KIF3CO14782 793 aa12.76□□□□□ -0.37
RACK1-228ENST00000512968 HMGB2P26583 209 aaKnown RBP12.76□□□□□ -0.37
RACK1-228ENST00000512968 LINC00116Q8NCU8 138 aa12.76□□□□□ -0.37
RACK1-228ENST00000512968 INSRP06213 1382 aa12.76□□□□□ -0.37
RACK1-228ENST00000512968 RGPD2P0DJD1 1756 aa12.75□□□□□ -0.37
RACK1-228ENST00000512968 FLT4P35916 1363 aa12.74□□□□□ -0.37
RACK1-228ENST00000512968 LOC102724428A0A0B4J2F2 783 aa12.74□□□□□ -0.37
RACK1-228ENST00000512968 SSFA2P28290 1259 aa12.74□□□□□ -0.37
RACK1-228ENST00000512968 SIK1P57059 783 aa12.74□□□□□ -0.37
RACK1-228ENST00000512968 EMILIN1Q9Y6C2 1016 aa12.74□□□□□ -0.37
RACK1-228ENST00000512968 GNPATO15228 680 aa12.73□□□□□ -0.37
RACK1-228ENST00000512968 ITPK1Q13572 414 aa12.73□□□□□ -0.37
RACK1-228ENST00000512968 C5P01031 1676 aa12.73□□□□□ -0.37
RACK1-228ENST00000512968 PPM1GO15355 546 aaPredicted RBP12.72□□□□□ -0.37
RACK1-228ENST00000512968 SLC24A1O60721 1099 aa12.72□□□□□ -0.37
RACK1-228ENST00000512968 MMP10P09238 476 aa12.72□□□□□ -0.37
RACK1-228ENST00000512968 TMF1P82094 1093 aa12.72□□□□□ -0.37
RACK1-228ENST00000512968 NKX1-1Q15270 411 aaPredicted RBP12.72□□□□□ -0.37
RACK1-228ENST00000512968 ASAP1Q9ULH1 1129 aa12.72□□□□□ -0.37
RACK1-228ENST00000512968 C4BP0C0L5 1744 aa12.71□□□□□ -0.37
RACK1-228ENST00000512968 ATP6V1AP38606 617 aa12.71□□□□□ -0.37
RACK1-228ENST00000512968 TMOD3Q9NYL9 352 aa12.71□□□□□ -0.37
RACK1-228ENST00000512968 SPG7Q9UQ90 795 aa12.71□□□□□ -0.37
RACK1-228ENST00000512968 NSD3Q9BZ95 1437 aa12.71□□□□□ -0.38
RACK1-228ENST00000512968 CARD14Q9BXL6 1004 aa12.7□□□□□ -0.38
RACK1-228ENST00000512968 BCS1LQ9Y276 419 aa12.7□□□□□ -0.38
RACK1-228ENST00000512968 KIF24Q5T7B8 1368 aa12.69□□□□□ -0.38
RACK1-228ENST00000512968 TOGARAM1Q9Y4F4 1720 aa12.69□□□□□ -0.38
RACK1-228ENST00000512968 A0A0G2JLW4 131 aa12.69□□□□□ -0.38
RACK1-228ENST00000512968 APLP1P51693 650 aa12.69□□□□□ -0.38
RACK1-228ENST00000512968 EYA1Q99502 592 aa12.69□□□□□ -0.38
RACK1-228ENST00000512968 PXDNLA1KZ92 1463 aa12.68□□□□□ -0.38
RACK1-228ENST00000512968 ARHGAP27Q6ZUM4 889 aa12.68□□□□□ -0.38
RACK1-228ENST00000512968 NMRK2Q9NPI5 230 aa12.68□□□□□ -0.38
RACK1-228ENST00000512968 ATG3Q9NT62 314 aa12.68□□□□□ -0.38
RACK1-228ENST00000512968 TOMM70O94826 608 aa12.67□□□□□ -0.38
RACK1-228ENST00000512968 PHKG2P15735 406 aa12.67□□□□□ -0.38
RACK1-228ENST00000512968 TRAPPC3LQ5T215 181 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms