RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 VAMP4O75379 141 aa11.6□□□□□ -0.55
SEC24D-209ENST00000509818 CLUAP1Q96AJ1 413 aa11.6□□□□□ -0.55
SEC24D-209ENST00000509818 NFAT5O94916 1531 aa11.6□□□□□ -0.55
SEC24D-209ENST00000509818 HTATSF1O43719 755 aaKnown RBP11.59□□□□□ -0.55
SEC24D-209ENST00000509818 FTSJ3Q8IY81 847 aaKnown RBP11.59□□□□□ -0.55
SEC24D-209ENST00000509818 RTF1Q92541 710 aaKnown RBP11.59□□□□□ -0.55
SEC24D-209ENST00000509818 LTN1O94822 1766 aa11.59□□□□□ -0.55
SEC24D-209ENST00000509818 SPATA31A6Q5VVP1 1343 aa11.59□□□□□ -0.55
SEC24D-209ENST00000509818 NUTM2BA6NNL0 878 aaPredicted RBP11.59□□□□□ -0.55
SEC24D-209ENST00000509818 NUTM2EB1AL46 878 aaPredicted RBP11.59□□□□□ -0.55
SEC24D-209ENST00000509818 HAP1P54257 671 aaPredicted RBP11.59□□□□□ -0.55
SEC24D-209ENST00000509818 DCTN1Q14203 1278 aa11.59□□□□□ -0.55
SEC24D-209ENST00000509818 MTHFSDQ2M296 383 aaKnown RBP11.59□□□□□ -0.55
SEC24D-209ENST00000509818 ATF7IPQ6VMQ6 1270 aa11.59□□□□□ -0.55
SEC24D-209ENST00000509818 NUTM2AQ8IVF1 878 aaPredicted RBP11.59□□□□□ -0.55
SEC24D-209ENST00000509818 NOB1Q9ULX3 412 aaKnown RBP11.59□□□□□ -0.55
SEC24D-209ENST00000509818 CHL1O00533 1208 aa11.58□□□□□ -0.56
SEC24D-209ENST00000509818 GCP02774 474 aa11.58□□□□□ -0.56
SEC24D-209ENST00000509818 RLBP1P12271 317 aa11.58□□□□□ -0.56
SEC24D-209ENST00000509818 XPCQ01831 940 aaPredicted RBP11.58□□□□□ -0.56
SEC24D-209ENST00000509818 MVPQ14764 893 aaKnown RBP11.58□□□□□ -0.56
SEC24D-209ENST00000509818 LTV1Q96GA3 475 aaPredicted RBP11.58□□□□□ -0.56
SEC24D-209ENST00000509818 USP19O94966 1318 aa11.58□□□□□ -0.56
SEC24D-209ENST00000509818 SOS2Q07890 1332 aaPredicted RBP11.58□□□□□ -0.56
SEC24D-209ENST00000509818 SLIT3O75094 1523 aa11.58□□□□□ -0.56
SEC24D-209ENST00000509818 TRPM3Q9HCF6 1732 aaPredicted RBP11.58□□□□□ -0.56
SEC24D-209ENST00000509818 TWISTNBQ3B726 338 aaPredicted RBP11.57□□□□□ -0.56
SEC24D-209ENST00000509818 LMOD2Q6P5Q4 547 aa11.57□□□□□ -0.56
SEC24D-209ENST00000509818 TNNQ9UQP3 1299 aa11.57□□□□□ -0.56
SEC24D-209ENST00000509818 PHRF1Q9P1Y6 1649 aaKnown RBP11.57□□□□□ -0.56
SEC24D-209ENST00000509818 TRIM27P14373 513 aa11.57□□□□□ -0.56
SEC24D-209ENST00000509818 MCM10Q7L590 875 aa11.57□□□□□ -0.56
SEC24D-209ENST00000509818 ARHGEF25Q86VW2 580 aa11.57□□□□□ -0.56
SEC24D-209ENST00000509818 ARHGAP45Q92619 1136 aa11.57□□□□□ -0.56
SEC24D-209ENST00000509818 LRRC59Q96AG4 307 aaKnown RBP11.57□□□□□ -0.56
SEC24D-209ENST00000509818 MRPL50Q8N5N7 158 aaKnown RBP11.56□□□□□ -0.56
SEC24D-209ENST00000509818 TSPYL6Q8N831 410 aa11.56□□□□□ -0.56
SEC24D-209ENST00000509818 CRB1P82279 1406 aa11.55□□□□□ -0.56
SEC24D-209ENST00000509818 ZBTB7CA1YPR0 619 aa11.55□□□□□ -0.56
SEC24D-209ENST00000509818 MEX3CQ5U5Q3 659 aaKnown RBP11.55□□□□□ -0.56
SEC24D-209ENST00000509818 C8orf58Q8NAV2 365 aa11.55□□□□□ -0.56
SEC24D-209ENST00000509818 DDX19BQ9UMR2 479 aa11.55□□□□□ -0.56
SEC24D-209ENST00000509818 KIAA0232Q92628 1395 aa11.55□□□□□ -0.56
SEC24D-209ENST00000509818 PXDNQ92626 1479 aa11.55□□□□□ -0.56
SEC24D-209ENST00000509818 NPHP3Q7Z494 1330 aa11.55□□□□□ -0.56
SEC24D-209ENST00000509818 GNAT3A8MTJ3 354 aa11.55□□□□□ -0.56
SEC24D-209ENST00000509818 ELL2O00472 640 aaPredicted RBP11.54□□□□□ -0.56
SEC24D-209ENST00000509818 CHMP4BQ9H444 224 aaKnown RBP11.54□□□□□ -0.56
SEC24D-209ENST00000509818 IGHDP01880 384 aa11.53□□□□□ -0.56
SEC24D-209ENST00000509818 NBPF6Q5VWK0 638 aa11.53□□□□□ -0.56
SEC24D-209ENST00000509818 ITPRIPQ8IWB1 547 aa11.53□□□□□ -0.56
SEC24D-209ENST00000509818 NBPF4Q96M43 638 aa11.53□□□□□ -0.56
SEC24D-209ENST00000509818 RWDD1Q9H446 243 aaPredicted RBP11.53□□□□□ -0.56
SEC24D-209ENST00000509818 ALS2Q96Q42 1657 aa11.53□□□□□ -0.56
SEC24D-209ENST00000509818 BABAM1Q9NWV8 329 aa11.53□□□□□ -0.56
SEC24D-209ENST00000509818 MAP3K5Q99683 1374 aa11.52□□□□□ -0.57
SEC24D-209ENST00000509818 ADAMTS2O95450 1211 aa11.52□□□□□ -0.57
SEC24D-209ENST00000509818 TMEM57Q8N5G2 664 aa11.52□□□□□ -0.57
SEC24D-209ENST00000509818 C8orf37Q96NL8 207 aa11.52□□□□□ -0.57
SEC24D-209ENST00000509818 API5Q9BZZ5 524 aaKnown RBP11.52□□□□□ -0.57
SEC24D-209ENST00000509818 TSPYL4Q9UJ04 414 aa11.52□□□□□ -0.57
SEC24D-209ENST00000509818 PCDHB15Q9Y5E8 787 aa11.52□□□□□ -0.57
SEC24D-209ENST00000509818 MSH5O43196 834 aa11.51□□□□□ -0.57
SEC24D-209ENST00000509818 USHBP1Q8N6Y0 703 aa11.51□□□□□ -0.57
SEC24D-209ENST00000509818 ANKRD24Q8TF21 1146 aa11.51□□□□□ -0.57
SEC24D-209ENST00000509818 AFF2P51816 1311 aa11.51□□□□□ -0.57
SEC24D-209ENST00000509818 PLEKHG5O94827 1062 aa11.51□□□□□ -0.57
SEC24D-209ENST00000509818 PLEKHO1Q53GL0 409 aaPredicted RBP11.51□□□□□ -0.57
SEC24D-209ENST00000509818 COL22A1Q8NFW1 1626 aaPredicted RBP11.5□□□□□ -0.57
SEC24D-209ENST00000509818 PDE4AP27815 886 aa11.5□□□□□ -0.57
SEC24D-209ENST00000509818 TAF7Q15545 349 aaPredicted RBP11.5□□□□□ -0.57
SEC24D-209ENST00000509818 AMOTQ4VCS5 1084 aa11.5□□□□□ -0.57
SEC24D-209ENST00000509818 TNS3Q68CZ2 1445 aa11.49□□□□□ -0.57
SEC24D-209ENST00000509818 IL17REQ8NFR9 667 aa11.49□□□□□ -0.57
SEC24D-209ENST00000509818 ZBTB40Q9NUA8 1239 aa11.49□□□□□ -0.57
SEC24D-209ENST00000509818 SOS1Q07889 1333 aaPredicted RBP11.49□□□□□ -0.57
SEC24D-209ENST00000509818 SPATA31A3Q5VYP0 1347 aa11.49□□□□□ -0.57
SEC24D-209ENST00000509818 NCAPD2Q15021 1401 aa11.49□□□□□ -0.57
SEC24D-209ENST00000509818 ZC3H6P61129 1189 aaKnown RBP11.49□□□□□ -0.57
SEC24D-209ENST00000509818 ZNF772Q68DY9 489 aaPredicted RBP11.49□□□□□ -0.57
SEC24D-209ENST00000509818 MIS18AQ9NYP9 233 aa11.49□□□□□ -0.57
SEC24D-209ENST00000509818 LRRC37A3O60309 1634 aa11.48□□□□□ -0.57
SEC24D-209ENST00000509818 RGPD2P0DJD1 1756 aa11.48□□□□□ -0.57
SEC24D-209ENST00000509818 HDAC1Q13547 482 aaPredicted RBP11.48□□□□□ -0.57
SEC24D-209ENST00000509818 BACH2Q9BYV9 841 aa11.48□□□□□ -0.57
SEC24D-209ENST00000509818 AXIN2Q9Y2T1 843 aa11.48□□□□□ -0.57
SEC24D-209ENST00000509818 ABCC4O15439 1325 aa11.48□□□□□ -0.57
SEC24D-209ENST00000509818 KRT24Q2M2I5 525 aa11.47□□□□□ -0.57
SEC24D-209ENST00000509818 AKAP4Q5JQC9 854 aa11.47□□□□□ -0.57
SEC24D-209ENST00000509818 ZBTB7BO15156 539 aaPredicted RBP11.46□□□□□ -0.57
SEC24D-209ENST00000509818 ZNF530Q6P9A1 599 aaPredicted RBP11.46□□□□□ -0.57
SEC24D-209ENST00000509818 SKAP1Q86WV1 359 aa11.46□□□□□ -0.57
SEC24D-209ENST00000509818 PTPRCP08575 1304 aa11.46□□□□□ -0.57
SEC24D-209ENST00000509818 CAMTA1Q9Y6Y1 1673 aa11.46□□□□□ -0.57
SEC24D-209ENST00000509818 RGS3P49796 1198 aa11.46□□□□□ -0.58
SEC24D-209ENST00000509818 C1orf141Q5JVX7 400 aa11.46□□□□□ -0.58
SEC24D-209ENST00000509818 NGLY1Q96IV0 654 aa11.46□□□□□ -0.58
SEC24D-209ENST00000509818 CEMIPQ8WUJ3 1361 aa11.46□□□□□ -0.58
SEC24D-209ENST00000509818 ERBB3P21860 1342 aa11.45□□□□□ -0.58
SEC24D-209ENST00000509818 ABCC6O95255 1503 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms